FFCP PHASE1:Hg19::chr6:135819555..135819564,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:135819555..135819564,-
|short_description=p@chr6:135819555..135819564,-
|description=CAGE_peak_at_chr6:135819555..135819564,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:135819555..135819564,- | |||
|coexpression_cluster_id=C2360 | |||
|description=CAGE_peak_at_chr6:135819555..135819564,- | |||
|id=chr6:135819555..135819564,- | |||
|ontology_enrichment_celltype=CL:0000860!4.45e-21!45;CL:0002057!1.65e-20!42;CL:0000557!1.57e-14!71;CL:0002009!9.58e-14!65;CL:0002194!9.84e-13!63;CL:0000576!9.84e-13!63;CL:0000040!9.84e-13!63;CL:0000559!9.84e-13!63;CL:0000839!3.90e-12!70;CL:0000766!5.81e-12!76;CL:0000738!2.49e-11!140;CL:0002031!2.32e-10!124;CL:0002087!4.37e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.78e-19;33!CL:0002057;7.78e-19;33!CL:0000576;5.30e-15;48!CL:0000473;5.27e-12;39!CL:0000234;5.27e-12;39!CL:0000766;1.83e-10;69!CL:0002393;3.12e-07;6!CL:0002397;3.12e-07;6!CL:0002087;6.28e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.85e-28,42;CL:0002057,3.85e-28,42;CL:0000473,1.22e-22,48;CL:0000234,1.22e-22,48;CL:0000738,7.79e-21,136;CL:0000557,9.73e-21,67;CL:0002009,1.00e-18,61;CL:0000766,2.01e-18,72;CL:0002031,3.75e-18,120;CL:0000839,1.68e-17,66;CL:0002194,3.58e-17,59;CL:0000576,3.58e-17,59;CL:0000040,3.58e-17,59;CL:0000559,3.58e-17,59;CL:0002087,3.64e-17,115;CL:0000988,3.24e-14,177;CL:0000037,4.92e-14,168;CL:0002032,1.16e-11,161;CL:0000837,1.16e-11,161;CL:0000763,4.22e-10,108;CL:0000049,4.22e-10,108;CL:0002393,5.41e-09,9;CL:0002397,5.41e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.83e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.52e-15!86;UBERON:0002371!1.25e-14!80;UBERON:0004765!3.73e-12!101;UBERON:0001434!3.73e-12!101;UBERON:0001049!6.82e-12!57;UBERON:0005068!6.82e-12!57;UBERON:0006241!6.82e-12!57;UBERON:0007135!6.82e-12!57;UBERON:0002390!1.38e-11!102;UBERON:0003061!1.38e-11!102;UBERON:0002193!3.89e-11!112;UBERON:0002405!1.25e-10!115;UBERON:0003080!8.84e-10!42;UBERON:0002780!9.11e-10!41;UBERON:0001890!9.11e-10!41;UBERON:0006240!9.11e-10!41;UBERON:0002616!1.06e-09!59;UBERON:0003075!2.06e-08!86;UBERON:0007284!2.06e-08!86;UBERON:0002020!2.68e-08!34;UBERON:0003528!2.68e-08!34;UBERON:0002346!5.39e-08!90;UBERON:0002204!1.14e-07!167;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0001893!1.62e-07!34;UBERON:0002791!2.12e-07!33;UBERON:0001869!3.86e-07!32;UBERON:0001017!5.55e-07!82;UBERON:0005743!8.23e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.60e-08;34!UBERON:0002020;1.60e-08;34!UBERON:0002780;2.11e-08;41!UBERON:0001890;2.11e-08;41!UBERON:0002791;3.05e-08;32!UBERON:0000125;7.22e-08;9!UBERON:0002308;7.22e-08;9!UBERON:0001869;3.85e-07;32!UBERON:0000073;4.05e-07;53!UBERON:0002616;4.05e-07;53!UBERON:0001893;5.29e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.62e-22,76;UBERON:0001474,1.30e-20,82;UBERON:0002390,3.88e-19,98;UBERON:0003061,3.88e-19,98;UBERON:0002405,5.13e-19,93;UBERON:0002193,3.10e-18,108;UBERON:0004765,4.35e-17,90;UBERON:0001434,2.68e-14,100;UBERON:0001049,3.97e-12,56;UBERON:0005068,3.97e-12,56;UBERON:0006241,3.97e-12,56;UBERON:0007135,3.97e-12,56;UBERON:0000073,2.09e-11,53;UBERON:0002616,2.09e-11,53;UBERON:0003081,2.14e-11,203;UBERON:0002780,1.53e-10,41;UBERON:0001890,1.53e-10,41;UBERON:0003080,1.53e-10,41;UBERON:0006240,1.53e-10,41;UBERON:0003528,2.62e-10,34;UBERON:0002020,2.62e-10,34;UBERON:0002791,4.03e-09,32;UBERON:0001893,3.42e-08,34;UBERON:0002204,4.89e-08,167;UBERON:0001869,5.60e-08,32;UBERON:0000125,1.01e-07,9;UBERON:0002308,1.01e-07,9;UBERON:0000955,1.45e-07,68;UBERON:0006238,1.45e-07,68;UBERON:0003075,2.43e-07,82;UBERON:0007284,2.43e-07,82;UBERON:0001017,6.24e-07,81;UBERON:0002346,6.29e-07,86 | |||
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| ||
|short_description=p@chr6:135819555..135819564,- | |||
}} | }} |
Latest revision as of 19:48, 30 July 2015
Short description: | p@chr6:135819555..135819564, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:135819555..135819564, - |
Coexpression cluster: | C2360_Basophils_CD14_Mast_Natural_CD34_CD8_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.85e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.85e-28 | 42 |
defensive cell | 1.22e-22 | 48 |
phagocyte | 1.22e-22 | 48 |
leukocyte | 7.79e-21 | 136 |
granulocyte monocyte progenitor cell | 9.73e-21 | 67 |
macrophage dendritic cell progenitor | 1.00e-18 | 61 |
myeloid leukocyte | 2.01e-18 | 72 |
hematopoietic lineage restricted progenitor cell | 3.75e-18 | 120 |
myeloid lineage restricted progenitor cell | 1.68e-17 | 66 |
monopoietic cell | 3.58e-17 | 59 |
monocyte | 3.58e-17 | 59 |
monoblast | 3.58e-17 | 59 |
promonocyte | 3.58e-17 | 59 |
nongranular leukocyte | 3.64e-17 | 115 |
hematopoietic cell | 3.24e-14 | 177 |
hematopoietic stem cell | 4.92e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.16e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-11 | 161 |
myeloid cell | 4.22e-10 | 108 |
common myeloid progenitor | 4.22e-10 | 108 |
intermediate monocyte | 5.41e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.41e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.62e-22 | 76 |
bone element | 1.30e-20 | 82 |
hematopoietic system | 3.88e-19 | 98 |
blood island | 3.88e-19 | 98 |
immune system | 5.13e-19 | 93 |
hemolymphoid system | 3.10e-18 | 108 |
skeletal element | 4.35e-17 | 90 |
skeletal system | 2.68e-14 | 100 |
neural tube | 3.97e-12 | 56 |
neural rod | 3.97e-12 | 56 |
future spinal cord | 3.97e-12 | 56 |
neural keel | 3.97e-12 | 56 |
regional part of nervous system | 2.09e-11 | 53 |
regional part of brain | 2.09e-11 | 53 |
lateral plate mesoderm | 2.14e-11 | 203 |
regional part of forebrain | 1.53e-10 | 41 |
forebrain | 1.53e-10 | 41 |
anterior neural tube | 1.53e-10 | 41 |
future forebrain | 1.53e-10 | 41 |
brain grey matter | 2.62e-10 | 34 |
gray matter | 2.62e-10 | 34 |
regional part of telencephalon | 4.03e-09 | 32 |
telencephalon | 3.42e-08 | 34 |
musculoskeletal system | 4.89e-08 | 167 |
cerebral hemisphere | 5.60e-08 | 32 |
neural nucleus | 1.01e-07 | 9 |
nucleus of brain | 1.01e-07 | 9 |
brain | 1.45e-07 | 68 |
future brain | 1.45e-07 | 68 |
neural plate | 2.43e-07 | 82 |
presumptive neural plate | 2.43e-07 | 82 |
central nervous system | 6.24e-07 | 81 |
neurectoderm | 6.29e-07 | 86 |