FFCP PHASE1:Hg19::chr6:31833005..31833017,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31833005..31833017,-
|short_description=p@chr6:31833005..31833017,-
|description=CAGE_peak_at_chr6:31833005..31833017,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:31833005..31833017,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr6:31833005..31833017,- | |||
|id=chr6:31833005..31833017,- | |||
|ontology_enrichment_celltype=CL:0000650!5.37e-14!3;CL:1000618!5.37e-14!3;CL:1001318!5.37e-14!3;CL:0002173!5.37e-14!3;CL:1000500!5.37e-14!3;CL:0000319!8.22e-11!1;CL:0000669!9.36e-09!5;CL:0000181!5.50e-08!12;CL:0000417!5.50e-08!12;CL:0000668!5.50e-08!12;CL:0000414!5.50e-08!12;CL:0000412!5.50e-08!12;CL:0000182!5.50e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.61e-38;12!CL:0000650;9.18e-26;2!CL:1000500;9.18e-26;2!CL:1000618;9.18e-26;2!CL:1001318;9.18e-26;2!CL:0002173;9.18e-26;2!CL:0000669;1.29e-13;4!CL:1000746;2.35e-08;7!CL:1000612;2.35e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000650,9.18e-26,2;CL:1000500,9.18e-26,2;CL:1000618,9.18e-26,2;CL:1001318,9.18e-26,2;CL:0002173,9.18e-26,2;CL:0000669,1.29e-13,4;CL:0000223,1.35e-08,58;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.07e-41;11!UBERON:0009497;5.63e-35;13!UBERON:0001041;9.12e-16;30!UBERON:0003104;5.87e-15;31 | |||
|ontology_enrichment_disease=DOID:3030!8.22e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:7;7.47e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0003567!5.37e-14!3;UBERON:0003838!5.37e-14!3;UBERON:0005169!5.37e-14!3;UBERON:0002321!5.37e-14!3;UBERON:0005215!5.37e-14!3;UBERON:0002303!5.37e-14!3;UBERON:0002319!5.37e-14!3;UBERON:0003891!9.36e-09!5;UBERON:0003586!9.36e-09!5;UBERON:0002368!9.92e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;9.18e-26;2!UBERON:0003838;9.18e-26;2!UBERON:0003586;9.18e-26;2!UBERON:0005169;9.18e-26;2!UBERON:0002321;9.18e-26;2!UBERON:0005215;9.18e-26;2!UBERON:0002303;9.18e-26;2!UBERON:0002319;9.18e-26;2!UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;3.78e-14;31!UBERON:0002330;3.78e-14;31!UBERON:0003891;1.29e-13;4!UBERON:0002368;2.46e-13;33!UBERON:0000949;2.01e-10;43!UBERON:0002417;2.24e-10;58!UBERON:0000916;2.24e-10;58!UBERON:0005172;6.55e-10;52!UBERON:0005173;6.55e-10;52!UBERON:0000074;2.35e-08;7!UBERON:0001229;2.35e-08;7!UBERON:0009569;3.93e-08;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,9.18e-26,2;UBERON:0003838,9.18e-26,2;UBERON:0003586,9.18e-26,2;UBERON:0005169,9.18e-26,2;UBERON:0002321,9.18e-26,2;UBERON:0005215,9.18e-26,2;UBERON:0002303,9.18e-26,2;UBERON:0002319,9.18e-26,2;UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0002368,1.18e-13,35;UBERON:0003891,1.29e-13,4;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.83e-08,59;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0005256,2.56e-07,122;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p@chr6:31833005..31833017,- | |||
}} | }} |
Latest revision as of 00:12, 31 July 2015
Short description: | p@chr6:31833005..31833017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31833005..31833017, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
mesangial cell | 9.18e-26 | 2 |
kidney interstitial cell | 9.18e-26 | 2 |
juxtaglomerular complex cell | 9.18e-26 | 2 |
renal interstitial pericyte | 9.18e-26 | 2 |
extraglomerular mesangial cell | 9.18e-26 | 2 |
pericyte cell | 1.29e-13 | 4 |
endodermal cell | 1.35e-08 | 58 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.38e-12 | 39 |