FFCP PHASE1:Hg19::chr8:101118185..101118205,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:101118185..101118205,-
|short_description=p2@RGS22
|description=CAGE_peak_2_at_RGS22_5end
|association_with_transcript=0bp_to_ENST00000523437_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26166 | |EntrezGene=26166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24499 | |HGNC=24499 | ||
|TSSclassifier=strong | |||
|UniProt=A8K944 | |UniProt=A8K944 | ||
|association_with_transcript=0bp_to_ENST00000523437_5end | |||
|cluster_id=chr8:101118185..101118205,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_RGS22_5end | |||
|id=chr8:101118185..101118205,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.42e-14;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.52e-12,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.91e-12;1!UBERON:0009117;9.38e-11;10!UBERON:0005564;9.38e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@RGS22 | |||
}} | }} |
Latest revision as of 19:02, 24 September 2015
Short description: | p2@RGS22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS22_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000523437_5end |
EntrezGene: | RGS22 |
HGNC: | 24499 |
UniProt: | A8K944 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.52e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 6.84e-23 | 2 |
pallidum | 6.84e-23 | 2 |
cranial nerve II | 1.75e-12 | 1 |
cranial nerve | 1.75e-12 | 1 |
nerve trunk | 1.75e-12 | 1 |
nerve connecting eye with brain | 1.75e-12 | 1 |
nerve | 1.75e-12 | 1 |
retinal neural layer | 1.75e-12 | 1 |
presumptive neural retina | 1.75e-12 | 1 |
olfactory region | 1.96e-12 | 1 |
primary subdivision of skull | 1.96e-12 | 1 |
cranium | 1.96e-12 | 1 |
neurocranium | 1.96e-12 | 1 |
chondrocranium | 1.96e-12 | 1 |
cartilaginous neurocranium | 1.96e-12 | 1 |
head paraxial mesoderm | 1.96e-12 | 1 |
adult organism | 2.77e-12 | 114 |
basal ganglion | 1.57e-11 | 9 |
nuclear complex of neuraxis | 1.57e-11 | 9 |
aggregate regional part of brain | 1.57e-11 | 9 |
collection of basal ganglia | 1.57e-11 | 9 |
cerebral subcortex | 1.57e-11 | 9 |
limbic system | 1.38e-09 | 5 |
telencephalic nucleus | 3.35e-07 | 7 |
pituitary gland | 5.73e-07 | 2 |
regional part of nervous system | 5.79e-07 | 53 |
regional part of brain | 5.79e-07 | 53 |
neural tissue | 7.20e-07 | 2 |
multi cell component structure | 7.20e-07 | 2 |
neuron projection bundle | 7.20e-07 | 2 |
head mesenchyme | 7.61e-07 | 2 |
nervous system | 9.48e-07 | 89 |