FFCP PHASE1:Hg19::chr14:52327321..52327336,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000557208_5end | |||
|cluster_id=chr14:52327321..52327336,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_GNG2_5end | |||
|id=chr14:52327321..52327336,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.15e-45!140;CL:0000037!7.73e-40!172;CL:0000566!7.73e-40!172;CL:0000988!2.67e-37!182;CL:0002032!7.99e-37!165;CL:0000837!7.99e-37!165;CL:0002031!2.08e-35!124;CL:0002087!1.31e-34!119;CL:0002057!5.07e-24!42;CL:0000766!7.47e-22!76;CL:0000860!2.20e-20!45;CL:0000763!1.52e-18!112;CL:0000049!1.52e-18!112;CL:0000557!2.05e-18!71;CL:0000542!7.97e-18!53;CL:0000051!7.97e-18!53;CL:0000838!1.87e-17!52;CL:0000048!7.98e-17!430;CL:0000839!1.09e-16!70;CL:0000134!1.11e-16!358;CL:0000034!2.83e-16!444;CL:0002009!5.47e-16!65;CL:0000219!6.24e-16!390;CL:0002320!7.63e-16!365;CL:0000723!1.17e-15!436;CL:0002194!4.20e-15!63;CL:0000576!4.20e-15!63;CL:0000040!4.20e-15!63;CL:0000559!4.20e-15!63;CL:0000084!2.79e-12!25;CL:0000827!2.79e-12!25;CL:0000791!4.97e-11!18;CL:0000789!4.97e-11!18;CL:0002420!4.97e-11!18;CL:0002419!4.97e-11!18;CL:0000790!4.97e-11!18;CL:0000625!2.06e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-18;33!CL:0002057;2.81e-18;33!CL:0000473;6.02e-14;39!CL:0000234;6.02e-14;39!CL:0000576;1.10e-13;48!CL:0002087;5.32e-13;104!CL:0000766;1.79e-12;69!CL:0000084;2.38e-12;25!CL:0000791;3.90e-11;18!CL:0000789;3.90e-11;18!CL:0002419;3.90e-11;18!CL:0000738;1.40e-10;136!CL:0000542;1.99e-10;53!CL:0000988;2.10e-08;177!CL:0000625;1.78e-07;11!CL:0000763;1.83e-07;100!CL:0000094;9.26e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.44e-49,136;CL:0000037,4.01e-43,168;CL:0000988,1.76e-40,177;CL:0002032,5.21e-40,161;CL:0000837,5.21e-40,161;CL:0002031,1.19e-38,120;CL:0002087,6.96e-38,115;CL:0000766,6.65e-25,72;CL:0000860,3.02e-24,42;CL:0002057,3.02e-24,42;CL:0000473,1.50e-22,48;CL:0000234,1.50e-22,48;CL:0000557,3.15e-21,67;CL:0000763,5.73e-21,108;CL:0000049,5.73e-21,108;CL:0000839,2.51e-19,66;CL:0002009,1.12e-18,61;CL:0000542,4.47e-18,53;CL:0000051,4.47e-18,53;CL:0000134,6.43e-18,354;CL:0002194,9.74e-18,59;CL:0000576,9.74e-18,59;CL:0000040,9.74e-18,59;CL:0000559,9.74e-18,59;CL:0000838,1.06e-17,52;CL:0000048,1.34e-17,427;CL:0000219,4.82e-17,386;CL:0002320,4.93e-17,361;CL:0000034,5.71e-17,441;CL:0000723,2.43e-16,433;CL:0000084,2.18e-12,25;CL:0000827,2.18e-12,25;CL:0000791,4.00e-11,18;CL:0000789,4.00e-11,18;CL:0002420,4.00e-11,18;CL:0002419,4.00e-11,18;CL:0000790,4.00e-11,18;CL:0000625,1.80e-07,11;CL:0000094,9.36e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.49e-18;42!CL:0000790;3.90e-11;18!CL:0000051;1.99e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.52e-22!102;UBERON:0003061!6.52e-22!102;UBERON:0002193!2.37e-20!112;UBERON:0002384!4.33e-15!375;UBERON:0002371!7.39e-15!80;UBERON:0001474!1.00e-13!86;UBERON:0004765!6.33e-11!101;UBERON:0001434!6.33e-11!101;UBERON:0002405!1.56e-10!115;UBERON:0007023!3.77e-10!115;UBERON:0002204!8.84e-08!167;UBERON:0002619!5.15e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.72e-07;22!UBERON:0000178;9.03e-07;15!UBERON:0000179;9.03e-07;15!UBERON:0000463;9.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-24,98;UBERON:0003061,1.82e-24,98;UBERON:0002193,2.42e-22,108;UBERON:0002371,3.81e-17,76;UBERON:0002405,5.32e-17,93;UBERON:0002384,2.99e-16,371;UBERON:0001474,7.46e-16,82;UBERON:0004765,1.45e-13,90;UBERON:0001434,8.31e-12,100;UBERON:0007023,4.50e-10,114;UBERON:0002204,3.59e-08,167;UBERON:0002619,4.54e-07,22;UBERON:0000178,9.32e-07,15;UBERON:0000179,9.32e-07,15;UBERON:0000463,9.32e-07,15 | |||
|phase1_expression=4.36028110249336,11.5614282901131,5.3562673556469,4.00293193412522,3.5756887554183,1.74467704820074,10.1319951267324,6.94891860769514,7.05201196139564,13.2696325710815,0.697801167972428,0,0,5.69325223616215,1.98838425436749,11.4295274896802,9.64311244838363,9.49403117503585,13.1741855673437,24.9935747895879,9.58803248847989,6.58254915103984,4.57977579409691,3.55873505189499,3.13856598987007,29.1899209957174,31.855028706579,32.1139987759811,321.771978462403,490.533970768238,147.53976552022,0,0,0,1.54934401160603,18.9085079208271,26.1304391008014,244.86597057109,239.450070279349,235.456794726699,21.9437164755126,25.2637059494804,31.1666436837366,153.395141912441,158.330020405611,161.560984751086,251.488217931951,197.360586250476,247.455390345188,243.675456296861,209.027136527746,277.630137889199,265.10942848646,289.822622929138,236.996351540098,161.88841200664,134.26982582846,186.745215573865,279.148509842263,370.352097245812,299.84911199975,198.90033401259,171.13981823936,205.440329756759,666.320411891229,766.53743855773,817.142790682194,159.040405107518,167.396016812885,217.623222394527,538.805557343698,890.495323817931,780.07978504178,70.9817762008124,61.2300383899325,83.4441409123336,34.5972183931205,33.9399777821804,102.060747552646,85.2188103786333,99.4583385995451,184.125466994751,47.5189860045571,46.4217819572812,45.3649719470413,58.035310269045,52.4518743017176,41.9569281166773,48.9173205860798,41.0243114450207,125.226853204079,150.919957668331,165.906581006349,30.3994055731759,263.439024601322,23.4411835449819,202.414353447134,210.260758070803,199.022251031525,239.912620885623,82.1324111916648,65.8092449971279,95.4650969198765,161.433752026617,137.580958790749,124.945116545162,210.143798281652,142.565638854676,130.839703645238,138.292277771692,166.639060724867,254.447109275376,153.773165999057,127.616974998793,113.943720947425,224.012570513088,164.018371261622,143.292644766257,250.236475407288,140.487347716927,160.817613102535,130.211930089427,137.92680907524,163.438902444192,261.105218494403,167.638294447164,169.973495362657,350.19091298136,398.485891717426,245.187715773579,9.75227465255847,28.1694361075527,19.8186970857472,2.53007406669196,2.00535164254356,2.75208386025565,6.36228757640879,1.45990461090791,7.27918092163323,4.21285855178871,7.20245242683634,22.0699742213646,0,0,1.62273696827342,2.61194605948901,2.6591592103773,49.8445404798165,36.6076742899282,53.8613376927869,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0,3.10100111003195,3.5576626268671,5.69025041699939,5.63961043952806,4.56163263431108,6.10155143870424,1.10298924103761,0,0,0,0.225222960966644,0,0.949265659568129,0.366403487860815,1309.89734931447,1675.21074112077,0,0,2.02608818663328,1.72131935057184,0.286836620748814,3.19201543978521,7.8494864019923,8.5399196583764,3.20667812942308,9.02512002659322,5.38842688278752,6.53847612453835,6.05429710579726,2.30470369792,9.60717870518566,3.1216007683032,5.70471821544449,2.83952493048422,8.6901528996386,9.87424960645602,9.97200727585964,4.28723759635276,6.01888154827663,2.6864703105699,4.75201142912821,2.96720315134268,29.1251635820168,7.18618141816238,7.23845290002485,9.50900751026928,2.49357703935765,17.5591048352335,2.75839016219118,3.60571341375832,8.96114246964166,13.9923915837312,7.04739383101272,4.66250182551036,17.4052835728953,9.78999027765169,6.69865404118636,8.00302482225836,33.7552664482532,60.9955652309103,20.6995694880174,7.73219148595314,10.5069936932228,41.1811127319273,59.8467463472183,10.0040749463188,0.966304265816484,0.545492241181669,0,1.58565817968474,2.51806559810822,6.04208502921496,9.74413917144482,7.56962552626885,4.74470566798579,1.56449532329816,0.643240938192885,6.90674606762403,2.3218396401599,1.44375896333917,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,8.11971000087113,5.60967095213783,6.173610169971,2.94017422771084,3.80265104465493,8.84544495009863,7.68026878685825,37.0829003508306,0,16.8136454092555,0.658501712451753,0,0,1.38882667737794,0.651616610620649,6.23960871167747,15.8764476227801,4.28942498407784,4.57893907519705,4.76409277611544,0.925971025153221,0.570762456703795,0,0,16.2503224017682,0.702012795417713,2.82399208348584,3.74935335947108,5.03946384596579,2.1266264586358,0.985143749731331,0.290633938513962,0.766765358330422,245.34629247218,87.3440465411202,97.8588705352444,97.4250885098659,77.2603692569445,8.63571362373499,9.16772221339866,4.68869788840188,6.84289784090821,12.0308166462889,17.1195542971033,25.724378936752,9.75540433804638,23.1058836481638,8.0672114403045,15.3833341751756,7.15312891703765,9.298330278116,3.72313363218819,0,3.34369586540785,1.41849132023278,3.46348832720929,3.0025378668211,1.62786481617433,7.40916303102692,6.84045987016844,1.42156779497018,7.12756685640086,4.52159065589379,2.61460037580088,1.99945982364114,40.1358476115929,37.6692818574095,12.6500363689819,1.19812427745791,0,8.5582143024431,5.79125226670317,4.52047909610843,17.9060963239896,354.63739559552,364.506906373565,387.051496872834,363.339135707968,58.1876689469441,281.102084332463,79.6487477161026,187.450700909136,75.2767726950733,647.891075714313,738.928804233942,1256.9222522515,3.6807447515742,4.00136416847742,2.98391526069709,0.623912584592421,0.535286966391485,0.473107245101804,0.585707074963566,1.20378439891088,2.27407504055985,3.10419213877515,0.664225598535437,2.94990669666725,4.51794795234031,1.76221041716467,4.11772108573027,178.854342596298,178.179929876178,159.024061127132,0,0,0,7.44323423456331,8.13348458426731,7.57782254969299,1.40953064181271,11.2575594794675,1.93024705372329,0,9.09837193435668,8.5229628150301,13.2224721182233,33.2322834677517,8.71577838449694,0.725156697549733,0.200506470303285,0,17.5666105691848,28.4062222090479,14.2925612305772,0.451199612907412,0.770153371044148,0,1.46139224653261,1.68882606228601,4.54933536283586,7.99440414799624,4.31831832204279,1.54227252690289,9.212178876491,1.50506932156456,0,0,1.79099803777743,7.01631605266991,4.18296721639841,0.256450125116389,0.984043937099117,1.95227036798582,12.7770854443176,14.4679754412983,17.822051982847,0,0.650060246036521,0,8.60369392799886,5.69979883324184,6.7541616879497,4.41077031950498,7.51941714077915,7.54086808353988,8.77834262385839,12.4644849905432,0.330569830721956,0.192190067365106,0,0,3.71876439437829,3.46293581513704,3.485186350803,18.4820148105653,5.85536633348724,6.08953094452551,4.26245703939016,9.30311763822943,4.09374206295634,2.21465597303108,2.85945290885737,4.86205803491534,2.1396949401696,3.5002357271853,3.92474320099615,7.01502584574927,9.33425901102586,7.30436894543256,5.0545620393329,1.58510321173008,6.7401352998237,5.36397112998549,13.8916689089832,1.05650146756755,19.6559872427499,12.1608671480193,2.26016233240486,4.96228809191512,1.99031692572366,2.63070531152258,1.73632660280006,5.9030527684197,2.23201414658974,10.5339989353915,4.50712964051586,7.31397896240663,2.25972794330179,2.1400263088875,8.86902660176495,2.11107635297664,1.31717957183961,18.9736586882858,15.3971276907792,0,1.34060455107157,0,14.498145319624,0.43050537267123,1.68471475667626,0,0.459446800413919,131.936378400364,99.4028369285088,86.0167252632985,99.1044185904402,140.685897395478,128.397715616158,129.607544937148,107.071898799727,0,0,0,65.5885208193787,34.6246111143468,33.2232408437094,111.598390910176,64.4641369727998,6.3196772143681,35.5611618976123,53.2379982050271,4.21195767170188,26.0187534097839,0.94007937463814,5.01268954180134,0,12.847046008296,5.44859209415828,6.81353980304522,25.4193955119266,0.307240764308458,0,0.166849141711909,21.2973023988224,0,51.6967075580392,0,63.2836739195858,53.5750619333828,0,30.0341767507383,0,43.574363252494,0,0.23874448473769,4.15750553165694,0,100.408912424396,47.1242544975218,2.89402633059555,2.96646973608167,1.68900326502395,10.3608953890556,44.2054264849836,12.5966373927138,10.5336742977219,40.4949009966919,3.73247505194169,0.539210106883961,0,2.04628948090749,10.6534878087888,86.2139132448983,1.11136990144637,16.4786566836187,26.9955165650987,87.8300711205254,0,0,13.7749919332611,0.227586896570999,0,0,20.3398590212464,0,10.070249706131,7.08593108651071,8.20055782652774,3.05163472634166,4.75490817704266,4.43321428430321,27.2037892470926,0,0,8.07977714289869,2.05095700524602,0,0,0.325942115766024,3.19001159731919,2.01514705484097,4.26427820814908,167.597009041008,3.1396051279005,25.4303873307239,0,0,0,0,56.8992952749756,0,0,3.53382678584852,1.08194319871046,12.9384051040206,13.5340073690109,15.2757536233406,13.9364930479892,11.8621381388643,10.0245071525237,8.82954842046869,16.8541305932746,10.0733711661896,1.45963831372533,0.19566461893209,0.728341138602278,5.52418163989147,24.1981432097328,185.174020786447,43.7882996825422,4.96067284067825,4.45859223008163,2.65861549082874,1.65495977937749,1.2557316736289,0,0,0.138674673013139,0,0.587954384486266,0,9.08578674858557,0,0.387025325156341,0.0730893170861856,0.246346371159628,10.2808357477725,0,11.9769792613682,4.93350928728303,4.57043606916876,46.3435026397032,0.782205530939212,0.881747022766871,10.6726497369676,0.799238438328521,0,0,6.34901492089269,0,0.745515213392595,0.235694034616795,1.22313785466253,1.35983700206033,9.68983067545057,7.51271533743949,4.80336230967832,3.42263447229983,45.98877170411,1.71906176567983,43.3764134560869,9.7748840445289,11.2288607765725,5.0251111720377,1.59743200399193,3.004582336956,7.14148663813992,9.33850267565495,3.96329871896644,1.16495949527454,0,0,0,0,7.78994655005217,53.2803892172233,19.3408836678437,9.48443575943613,8.25236619583403,9.13968743664207,191.227807818775,88.9872247741642,74.6612051327123,0.335434687599266,7.25012507152623,20.0376526675693,1.05600336519407,0,0,17.1526878329608,3.97255182219259,0,0.542999601753713,5.18532894720761,10.7773828836105,2.39460383124975,23.2321833720629,7.49707295855856,28.894583337632,10.8448652921781,3.97520666736664,13.1868615488782,16.6613078195789,0,0.704815022316672,23.2796559397574,32.2268825454315,12.0129326050687,30.762293352341,1.7785046870815,113.388909092614,5.10673006216145,54.9457981403169,67.4355814921063,62.8008432365096,24.5904473032353,0.157054096250234,27.4681135789766,40.8787987421577,20.6565035665725,4.58727356552057,9.20711127755874,14.5926546912251,5.25724812757677,2.12466693535581,5.91431558412426,3.99651466962954,3.52898729547258,0.468334905806882,44.6356768121342,4.0298796779456,5.14169281663894,8.3220879225392,3.21985108967651,2.76724691927833,3.55924488638614,0.457680136793847,1.51230923763239,6.21748802331122,5.76635084959572,8.60202542683993,5.84744045812686,10.8684069813382,9.53824278033968,2.92425886013794,14.0871166689168,7.06210762286927,6.47368860686952,10.9855097965259,4.00067050245631,12.1373929458012,2.78420255927096,7.96191777397232,10.400721881242,4.46414416737631,4.37774335395695,17.6658857520111,0,0.214441591374926,0,0.453411851024545,1.389134845943,0,5.01448755028165,0.308801447160972,1.31570429747224,0.883445729729405,0,0,0,0,1.21543982470953,22.5361250927321,53.196864313153,21.6569689710782,19.1371511279338,1.96565909307848,0.491545817507439,0,82.3948070922311,6.18812032226017,0,0,3.68211900503681,0,8.08700438042865,10.6152328182031,73.3208717497436,0.314531883711793,29.5958119500358,1.86705782949428,3.18862380152524,0.867550349813015,4.46915934378595,2.54403480522735,24.1316939703835,7.20513673456923,1.05802783107205,2.7562092961788,31.4723202972652,14.1696576325585,9.89729926154338,17.4348909604642,166.619391202556,22.2686352934782,28.7426649224695,7.13847101295772,0.0981477185010256,0,0.183428598521679,0,10.6786986730807,22.0915176339232,1.79024599904647,14.2147520580096,5.84944699240208,3.90757005616546,0,0.327543835020193,0.147856086217045,38.6314984017217,18.7458743667323,21.0820532431208,31.6444892867595,176.672863312885,6.030835435429,15.8787577084574,0,0,9.64263304580916,2.35398605553177,13.3532432932059,17.5299887340499,11.8861176017936,49.089678698762,2.40083213212386,7.0688522295905,27.8218832170852,0.118193840883968,5.89526430027966,15.6201254772523,13.5119407327762,0,34.7000313793608,0.215927591218621,0,18.2265187650474,0,0,0.521574816907738,6.41369091784202,0.828864656652147,0,0,7.31386509994472,0,0.170426809518315,4.23387050190929,0,1.5510319283216,2.8666168169323,0,0,0,3.23714418593947,5.85177999080608,13.9177731760584,13.1141968125968,19.1830360038927,68.2401158803493,0.118920090777569,62.4591833675449,1.09940516745429,21.4367237864676,17.2870114161796,20.326039126868,0,7.84474629612498,0.471353094203252,9.42280642151737,9.50548481046675,37.6163597549226,2.37897960562944,98.6831138788463,60.2681252552947,0.0999411559249289,0,0,0,8.03370027071169,17.4317127693725,5.5902437429066,0.473314686579554,37.463311095194,139.632220908921,28.0384225473162,6.69591032700152,2.77305377178851,2.16313281061895,7.69615191493981,10.5987604804785,24.8329061982416,3.97756435993729,1.06886962106224,0.827054095813604,1.25353769646188,29.8568070979863,31.6197673584291,9.95003327350535,5.06821679723287,9.80876316744512,16.6645102024618,88.4222175654924,64.0611051533254,0.224263725161227,2.99141643907375,9.70162506999453,11.321270890642,10.951465634729,38.862134589417,12.4796637383257,10.9777917660184,5.53542226554627,0.106727345877715,7.7228912914776,2.33545525477126,7.03922827210363,14.9134561903097,8.13792356631477,3.32878387092756,44.2802345900258,66.037109414466 | |||
|short_description=p1@GNG2 | |||
}} |
Latest revision as of 05:38, 20 September 2015
Short description: | p1@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -22bp_to_ENST00000557208_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-24 | 98 |
blood island | 1.82e-24 | 98 |
hemolymphoid system | 2.42e-22 | 108 |
bone marrow | 3.81e-17 | 76 |
immune system | 5.32e-17 | 93 |
connective tissue | 2.99e-16 | 371 |
bone element | 7.46e-16 | 82 |
skeletal element | 1.45e-13 | 90 |
skeletal system | 8.31e-12 | 100 |
adult organism | 4.50e-10 | 114 |
musculoskeletal system | 3.59e-08 | 167 |
regional part of cerebral cortex | 4.54e-07 | 22 |
blood | 9.32e-07 | 15 |
haemolymphatic fluid | 9.32e-07 | 15 |
organism substance | 9.32e-07 | 15 |