FFCP PHASE1:Hg19::chr14:79745912..79745941,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9369 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=156bp_to_ENST00000281127_5end | |||
|cluster_id=chr14:79745912..79745941,+ | |||
|description=CAGE_peak_4_at_NRXN3_5end | |||
|id=chr14:79745912..79745941,+ | |||
|ontology_enrichment_celltype=CL:0000077!2.98e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.49e-08;19!CL:0002537;2.55e-07;5!CL:0000349;3.50e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.36e-08,19;CL:0002537,2.54e-07,5;CL:0000349,3.22e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.82e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.46e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-20!82;UBERON:0005743!2.48e-20!86;UBERON:0002616!2.57e-20!59;UBERON:0001049!1.01e-19!57;UBERON:0005068!1.01e-19!57;UBERON:0006241!1.01e-19!57;UBERON:0007135!1.01e-19!57;UBERON:0007023!1.49e-19!115;UBERON:0000955!3.33e-19!69;UBERON:0006238!3.33e-19!69;UBERON:0000073!1.12e-18!94;UBERON:0001016!1.12e-18!94;UBERON:0003075!5.30e-17!86;UBERON:0007284!5.30e-17!86;UBERON:0002346!3.18e-15!90;UBERON:0002780!1.49e-14!41;UBERON:0001890!1.49e-14!41;UBERON:0006240!1.49e-14!41;UBERON:0003080!7.04e-14!42;UBERON:0004121!3.28e-13!169;UBERON:0002020!3.38e-13!34;UBERON:0003528!3.38e-13!34;UBERON:0001893!3.91e-13!34;UBERON:0002791!1.31e-12!33;UBERON:0001869!1.35e-12!32;UBERON:0000924!3.22e-12!173;UBERON:0006601!3.22e-12!173;UBERON:0003056!2.65e-11!61;UBERON:0000468!4.88e-11!659;UBERON:0000064!1.16e-10!219;UBERON:0000475!1.77e-10!365;UBERON:0000033!1.97e-10!123;UBERON:0000062!2.29e-10!511;UBERON:0000153!9.70e-10!129;UBERON:0007811!9.70e-10!129;UBERON:0000956!2.22e-09!25;UBERON:0000203!2.22e-09!25;UBERON:0000025!3.48e-09!194;UBERON:0000477!4.54e-09!286;UBERON:0000467!8.51e-09!625;UBERON:0000480!1.14e-08!626;UBERON:0000481!2.98e-08!347;UBERON:0000922!5.98e-08!612;UBERON:0003133!6.00e-08!48;UBERON:0004111!7.85e-08!241;UBERON:0002619!8.34e-08!22;UBERON:0002050!2.13e-07!605;UBERON:0005423!2.13e-07!605;UBERON:0000119!2.27e-07!312;UBERON:0000483!2.58e-07!309;UBERON:0001950!2.76e-07!20;UBERON:0003076!3.54e-07!15;UBERON:0003057!3.54e-07!15;UBERON:0000923!3.92e-07!604;UBERON:0005291!3.92e-07!604;UBERON:0006598!3.92e-07!604;UBERON:0002532!3.92e-07!604;UBERON:0005156!4.11e-07!59;UBERON:0000990!4.11e-07!59;UBERON:0005631!8.05e-07!14;UBERON:0000158!8.05e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.39e-10;34!UBERON:0002020;1.39e-10;34!UBERON:0001869;5.07e-10;32!UBERON:0003688;7.01e-10;6!UBERON:0002358;7.01e-10;6!UBERON:0003684;7.01e-10;6!UBERON:0001178;7.01e-10;6!UBERON:0002791;1.40e-09;32!UBERON:0004732;3.94e-09;13!UBERON:0001893;4.87e-09;34!UBERON:0001017;1.78e-08;75!UBERON:0000073;1.84e-08;53!UBERON:0002616;1.84e-08;53!UBERON:0004733;2.49e-08;12!UBERON:0002028;2.49e-08;12!UBERON:0004457;3.00e-08;9!UBERON:0000042;3.00e-08;9!UBERON:0000956;4.75e-08;25!UBERON:0000203;4.75e-08;25!UBERON:0002298;2.39e-07;6!UBERON:0000305;2.70e-07;7!UBERON:0000955;3.92e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.02e-16,56;UBERON:0005068,2.02e-16,56;UBERON:0006241,2.02e-16,56;UBERON:0007135,2.02e-16,56;UBERON:0000955,1.65e-14,68;UBERON:0006238,1.65e-14,68;UBERON:0001017,1.87e-14,81;UBERON:0000073,5.48e-14,53;UBERON:0002616,5.48e-14,53;UBERON:0001016,8.29e-14,89;UBERON:0003075,2.52e-13,82;UBERON:0007284,2.52e-13,82;UBERON:0002346,3.25e-12,86;UBERON:0003076,3.11e-11,15;UBERON:0003057,3.11e-11,15;UBERON:0003528,8.05e-11,34;UBERON:0002020,8.05e-11,34;UBERON:0001869,8.99e-11,32;UBERON:0001893,7.55e-10,34;UBERON:0003688,7.97e-10,6;UBERON:0002358,7.97e-10,6;UBERON:0003684,7.97e-10,6;UBERON:0001178,7.97e-10,6;UBERON:0007023,9.71e-10,114;UBERON:0010371,9.94e-10,104;UBERON:0002791,1.46e-09,32;UBERON:0004732,5.13e-09,13;UBERON:0002780,2.89e-08,41;UBERON:0001890,2.89e-08,41;UBERON:0003080,2.89e-08,41;UBERON:0006240,2.89e-08,41;UBERON:0004733,3.32e-08,12;UBERON:0002028,3.32e-08,12;UBERON:0007277,3.32e-08,12;UBERON:0004871,3.33e-08,8;UBERON:0004121,3.42e-08,171;UBERON:0000924,3.42e-08,171;UBERON:0006601,3.42e-08,171;UBERON:0000956,5.54e-08,25;UBERON:0000203,5.54e-08,25;UBERON:0000305,2.69e-07,7;UBERON:0003056,2.75e-07,61;UBERON:0002298,3.39e-07,6;UBERON:0004457,3.79e-07,12;UBERON:0000042,3.79e-07,12;UBERON:0010314,3.88e-07,132;UBERON:0005631,7.91e-07,14;UBERON:0000158,7.91e-07,14 | |||
|phase1_expression=4.36028110249336,1.2846031433459,11.5582611358696,7.00513088471913,8.93922188854576,11.3404008133048,0,0.631719873426831,0,0.245733936501509,0,6.55324116390517,0.527533956456907,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0.975865597581014,0,0.204000691244253,0,1.71741592278634,5.06435372769671,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0.50133791063589,0,0,0,0.189069634328136,2.21729397462564,1.40535657109002,0.392937226493138,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,26.8364853915472,0.379891534993739,0,0,0,1.12135520028461,0,0.98667019366864,0,0.538842688278752,0,1.51357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.680593098960126,0.538168907066586,0.427114777637135,0.847727604638247,0,0,1.28820270022815,1.11670113798954,0,0.292311015483596,0,0,0,0.355009592516614,0.10075209822764,0.847802961552438,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0.414644220061482,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.842923450390509,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0.588664395376038,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,3.87448690978212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,21.9761916788222,0,0,6.38251479803689,2.08014873822732,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,5.27174682081482,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,1.66376689224646,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,3.32870879020994,2.41912234663744,2.97729369382532,4.29693525206575,0.841980283299221,4.35673107469383,3.07024349440022,10.7772127166217,1.48418066444991,0,0.710246901252508,0.0821271560138091,0,0,0.362578348774867,0,0,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.429374660225974,0.372158369359667,9.8077621662805,4.00323407240032,0.511795582622668,0,0,0,0,0.54907405947211,0.471249609382746,0.404364963146632,0,0,0,0.243713489631284,0,1.36499911407986,0,0,0,0.66343897524122,1.31535265576129,0,0,2.23201414658974,2.16876448669825,3.09865162785466,0,0.982490410131212,3.92338156629375,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,1.78178808499583,3.07160702099232,8.94732882989668,5.20476840718897,0,0,0,2.78947183551498,1.38141957765574,0.251932747854276,1.02268682502155,0,7.46495010388338,0.179736702294654,0,0,0.986434056369336,0,1.11136990144637,2.90799823828566,0.649376687132959,0,5.4689829827899,0.174919999992391,0,0,0,0,0.344743373241465,0,3.29887490373255,2.65722415744152,1.4471572635049,36.6196167161,25.101492004388,36.6479047502399,3.51016635446356,0,0.139423744278603,0.538651809526579,0,0,0,0.108647371922008,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.884575645033392,2.4441205797345,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,6.70793484843964,2.41981432097328,0.61214552326098,0.189559738885464,0.300646838828985,1.45163467956146,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.261177619741208,1.92199335066233,0,0,0,0,2.61870344518732,0,1.12990370390266,0.137041924646751,0,3.10222900183806,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,1.08723364858891,0.627617077873999,0,0,0.600420288709789,0.821432273351958,0,5.15718529703949,0,0.837847203816763,1.14580212005842,0,0.199679000498991,0,0,0.335917362433631,36.7505881213252,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.550157746388935,0.415440338029185,0,0,4.31321852271975,0,0.315222829196793,0.472091293214983,0,1.07572403599707,0,0.714695326373367,0.662091970365432,0,3.25799761052228,5.18532894720761,0.653174720218818,0,0,1.70388021785422,0,0,1.32506888912221,1.16354660725395,1.19009341568421,0,0,0.533937062838473,0.628817220398664,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.3184990331373,1.1267183763585,1.14681839138014,2.99508439149501,1.42821726765182,0,0.124980407962107,0,0,0.235265819698172,2.81000943484129,0.869526171664951,0,0.233713309847224,0,0,0.251567901752575,0,0.45768013679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| |||
|short_description=p4@NRXN3 | |||
}} |
Latest revision as of 07:02, 16 September 2015
Short description: | p4@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NRXN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_ENST00000281127_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.36e-08 | 19 |
amnion mesenchymal stem cell | 2.54e-07 | 5 |
extraembryonic cell | 3.22e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.46e-10 | 14 |