FFCP PHASE1:Hg19::chr15:48468411..48468417,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:48468411..48468417,- | |||
|description=CAGE_peak_at_chr15:48468411..48468417,- | |||
|id=chr15:48468411..48468417,- | |||
|ontology_enrichment_celltype=CL:0000838!8.52e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.89e-16;3!UBERON:0003056;1.92e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-19!94;UBERON:0001016!3.53e-19!94;UBERON:0005743!4.49e-18!86;UBERON:0001017!5.04e-18!82;UBERON:0001049!1.57e-17!57;UBERON:0005068!1.57e-17!57;UBERON:0006241!1.57e-17!57;UBERON:0007135!1.57e-17!57;UBERON:0000955!8.67e-17!69;UBERON:0006238!8.67e-17!69;UBERON:0002346!9.53e-17!90;UBERON:0002780!1.31e-15!41;UBERON:0001890!1.31e-15!41;UBERON:0006240!1.31e-15!41;UBERON:0003080!6.41e-15!42;UBERON:0002616!1.02e-14!59;UBERON:0003075!1.57e-14!86;UBERON:0007284!1.57e-14!86;UBERON:0001893!9.08e-13!34;UBERON:0001869!2.79e-12!32;UBERON:0002791!4.27e-12!33;UBERON:0002020!1.18e-11!34;UBERON:0003528!1.18e-11!34;UBERON:0003056!1.31e-11!61;UBERON:0000956!1.14e-10!25;UBERON:0000203!1.14e-10!25;UBERON:0001950!5.81e-10!20;UBERON:0000924!7.47e-10!173;UBERON:0006601!7.47e-10!173;UBERON:0002619!2.84e-09!22;UBERON:0004121!1.95e-08!169;UBERON:0000153!2.74e-08!129;UBERON:0007811!2.74e-08!129;UBERON:0000033!1.14e-07!123;UBERON:0007023!1.66e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.42e-11;4!UBERON:0010133;1.42e-11;4!UBERON:0001905;9.47e-11;2!UBERON:0002757;9.47e-11;2!UBERON:0010134;9.47e-11;2!UBERON:0005408;9.47e-11;2!UBERON:0001899;9.47e-11;2!UBERON:0002037;4.04e-08;6!UBERON:0000073;7.98e-07;53!UBERON:0002616;7.98e-07;53!UBERON:0001894;8.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.86e-12,86;UBERON:0003296,2.85e-11,4;UBERON:0010133,2.85e-11,4;UBERON:0000955,8.82e-11,68;UBERON:0006238,8.82e-11,68;UBERON:0000073,1.09e-10,53;UBERON:0002616,1.09e-10,53;UBERON:0001905,3.23e-10,2;UBERON:0002757,3.23e-10,2;UBERON:0010134,3.23e-10,2;UBERON:0005408,3.23e-10,2;UBERON:0001899,3.23e-10,2;UBERON:0001016,4.10e-10,89;UBERON:0001017,4.60e-10,81;UBERON:0003075,5.20e-10,82;UBERON:0007284,5.20e-10,82;UBERON:0001049,5.33e-10,56;UBERON:0005068,5.33e-10,56;UBERON:0006241,5.33e-10,56;UBERON:0007135,5.33e-10,56;UBERON:0003056,6.30e-09,61;UBERON:0010371,1.92e-08,104;UBERON:0002037,4.94e-08,6;UBERON:0006215,4.94e-08,6;UBERON:0002780,5.88e-08,41;UBERON:0001890,5.88e-08,41;UBERON:0003080,5.88e-08,41;UBERON:0006240,5.88e-08,41;UBERON:0004121,1.01e-07,171;UBERON:0000924,1.01e-07,171;UBERON:0006601,1.01e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,1.14494394852423,0.136874425072884,0.627713197974014,0.458480434487708,0.328402357799783,0.314843125254717,0,0.767658796194425,0,0,0,0,0.232401601740905,0,0.880801318004542,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,3.41527781465669,2.34894875748376,1.14681968437569,1.32171328579026,0,0.526768169550154,0.590129310341499,1.57204305099666,1.02800749499755,0,0,0,0,0,0.589211814949674,0,0,0.128091319725675,0,0,0,0.289803085735052,0.593146252648242,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0.759059076058509,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.80642697289893,1.33720097891754,1.15859523106239,0,0,0,0.361439152384566,0,0,0,0,0.661743720148475,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.953962497221368,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.625098097988558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0.397589304964456,0.116193942869518,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0.788123040807709,0.431255149719035,1.41177339907723,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.364182336013434,0,0.902399225814824,0.231046011313244,0,0,0.527758144464379,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.782560276832555,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.36408156524854,0,0.284136146806413,0,0,0,0,0.281338832821026,0.222617410045812,0.659215496907038,0.63337622438398,0.398495976502139,0,1.0077309914171,0.409074730008619,0.246169610922139,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,1.99613798001194,0.520855522170466,0.699679999969566,0,0,0.508507300585533,0.709163045303809,2.06846023944879,1.45802306691627,1.21537496453305,0,0.241192877250816,4.5774520895125,1.10579259931225,1.18219047581419,0.219385397153973,0,0,0,0,0.46112780877612,0,0.217294743844016,0,0,0,0,0,0.166211681900156,0,0,0,0,0.635746315921515,0.210998064528027,0,0.141353071433941,0.216388639742091,0.995261931078505,0,0.611030144933625,0.889563386041866,0.370691816839509,0.208843899010911,0.337005664903385,0,0.234264445725339,0.91227394607833,0,0,0.789168805698781,2.41981432097328,2.44858209304392,0.189559738885464,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.617792886840502,0,0,0.596143835108969,0.316553979779393,0,0.0801588202515337,0.426905989478705,0.19980960958213,0.144090417154106,0.458146384663663,0.343189995723929,0,0.248505071130865,0,0.407712618220842,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0.157566364614447,0,0.0674035438541849,0,0.169346664131569,0,0.136203406111576,0.321506296930038,0.687697182986169,0.415440338029185,1.1248694577575,0,0.607495566580247,0,0.315222829196793,0.419636705079985,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.66116300871345,0.342173675768659,0,0.106787412567695,0.471612915298998,0,0,0.395223263795889,0.974340787047167,1.27668251554036,0,0,0,0,0.157054096250234,0.886068179966986,0.488105059607853,0.625954653532499,0,0.554645257684261,0.310482014706917,0,0.124980407962107,0,0.285465333544967,0,1.40500471742064,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0.260994291965212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| |||
|short_description=p@chr15:48468411..48468417,- | |||
}} |
Latest revision as of 02:08, 25 July 2015
Short description: | p@chr15:48468411..48468417, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48468411..48468417, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.86e-12 | 86 |
gland of diencephalon | 2.85e-11 | 4 |
neuroendocrine gland | 2.85e-11 | 4 |
brain | 8.82e-11 | 68 |
future brain | 8.82e-11 | 68 |
regional part of nervous system | 1.09e-10 | 53 |
regional part of brain | 1.09e-10 | 53 |
pineal body | 3.23e-10 | 2 |
regional part of epithalamus | 3.23e-10 | 2 |
secretory circumventricular organ | 3.23e-10 | 2 |
circumventricular organ | 3.23e-10 | 2 |
epithalamus | 3.23e-10 | 2 |
nervous system | 4.10e-10 | 89 |
central nervous system | 4.60e-10 | 81 |
neural plate | 5.20e-10 | 82 |
presumptive neural plate | 5.20e-10 | 82 |
neural tube | 5.33e-10 | 56 |
neural rod | 5.33e-10 | 56 |
future spinal cord | 5.33e-10 | 56 |
neural keel | 5.33e-10 | 56 |
pre-chordal neural plate | 6.30e-09 | 61 |
ecto-epithelium | 1.92e-08 | 104 |
cerebellum | 4.94e-08 | 6 |
rhombic lip | 4.94e-08 | 6 |
regional part of forebrain | 5.88e-08 | 41 |
forebrain | 5.88e-08 | 41 |
anterior neural tube | 5.88e-08 | 41 |
future forebrain | 5.88e-08 | 41 |
ectoderm-derived structure | 1.01e-07 | 171 |
ectoderm | 1.01e-07 | 171 |
presumptive ectoderm | 1.01e-07 | 171 |