FFCP PHASE1:Hg19::chr16:28996364..28996381,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18874 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9K3,O43561 | |||
|association_with_transcript=-5bp_to_ENST00000395456,ENST00000454369,NM_001014987,NM_001014988,NM_014387_5end | |||
|cluster_id=chr16:28996364..28996381,+ | |||
|coexpression_cluster_id=C3552 | |||
|description=CAGE_peak_3_at_LAT_5end | |||
|id=chr16:28996364..28996381,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.58e-50!172;CL:0000566!4.58e-50!172;CL:0000988!2.09e-49!182;CL:0002032!3.77e-47!165;CL:0000837!3.77e-47!165;CL:0000738!3.68e-44!140;CL:0002031!1.97e-37!124;CL:0002087!2.59e-36!119;CL:0000763!7.35e-29!112;CL:0000049!7.35e-29!112;CL:0000766!4.90e-25!76;CL:0000839!6.45e-22!70;CL:0000084!1.03e-20!25;CL:0000827!1.03e-20!25;CL:0000557!1.69e-19!71;CL:0002194!8.48e-18!63;CL:0000576!8.48e-18!63;CL:0000040!8.48e-18!63;CL:0000559!8.48e-18!63;CL:0002009!1.10e-16!65;CL:0000542!3.78e-16!53;CL:0000051!3.78e-16!53;CL:0000838!4.89e-16!52;CL:0000791!9.47e-16!18;CL:0000789!9.47e-16!18;CL:0002420!9.47e-16!18;CL:0002419!9.47e-16!18;CL:0000790!9.47e-16!18;CL:0002057!4.13e-15!42;CL:0000860!3.31e-13!45;CL:0000625!3.77e-10!11;CL:0000134!6.79e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.91e-27;25!CL:0000791;1.24e-20;18!CL:0000789;1.24e-20;18!CL:0002419;1.24e-20;18!CL:0000473;7.45e-16;39!CL:0000234;7.45e-16;39!CL:0000860;8.66e-16;33!CL:0002057;8.66e-16;33!CL:0000625;4.21e-13;11!CL:0000766;3.81e-11;69!CL:0000763;4.53e-11;100!CL:0002087;1.41e-10;104!CL:0000576;3.58e-10;48!CL:0000738;1.96e-09;136!CL:0000988;2.22e-08;177!CL:0000624;4.48e-08;6!CL:0000542;4.82e-08;53!CL:0000097;5.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.63e-46,168;CL:0000988,8.71e-46,177;CL:0002032,1.70e-44,161;CL:0000837,1.70e-44,161;CL:0000738,3.11e-41,136;CL:0002031,8.17e-37,120;CL:0002087,3.36e-35,115;CL:0000763,3.26e-28,108;CL:0000049,3.26e-28,108;CL:0000084,2.53e-27,25;CL:0000827,2.53e-27,25;CL:0000766,2.13e-26,72;CL:0000839,1.90e-22,66;CL:0000557,7.00e-21,67;CL:0000791,1.22e-20,18;CL:0000789,1.22e-20,18;CL:0002420,1.22e-20,18;CL:0002419,1.22e-20,18;CL:0000790,1.22e-20,18;CL:0000473,1.82e-18,48;CL:0000234,1.82e-18,48;CL:0002194,3.65e-18,59;CL:0000576,3.65e-18,59;CL:0000040,3.65e-18,59;CL:0000559,3.65e-18,59;CL:0002009,3.72e-17,61;CL:0000860,3.45e-15,42;CL:0002057,3.45e-15,42;CL:0000838,6.39e-15,52;CL:0000542,1.96e-14,53;CL:0000051,1.96e-14,53;CL:0000625,4.18e-13,11;CL:0000134,4.03e-08,354;CL:0000624,4.50e-08,6;CL:0000219,6.67e-08,386;CL:0002320,1.76e-07,361;CL:0000097,5.12e-07,5;CL:0002028,5.12e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.24e-20;18!CL:0002057;5.54e-12;42!CL:0000051;4.82e-08;53!CL:0000049;5.91e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!8.49e-10!39;DOID:2531!1.11e-09!51;DOID:0060083!1.11e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.02e-09,39;DOID:2531,1.13e-07,51;DOID:0060083,1.13e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.46e-29!102;UBERON:0003061!4.46e-29!102;UBERON:0002193!4.28e-28!112;UBERON:0002371!7.25e-17!80;UBERON:0001474!2.24e-16!86;UBERON:0002405!3.02e-13!115;UBERON:0004765!6.48e-12!101;UBERON:0001434!6.48e-12!101;UBERON:0000178!1.66e-11!15;UBERON:0000179!1.66e-11!15;UBERON:0000463!1.66e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.12e-15;15!UBERON:0000179;7.12e-15;15!UBERON:0000463;7.12e-15;15!UBERON:0002390;7.93e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.27e-32,98;UBERON:0003061,3.27e-32,98;UBERON:0002193,1.52e-29,108;UBERON:0002405,1.12e-18,93;UBERON:0002371,1.06e-16,76;UBERON:0001474,2.27e-15,82;UBERON:0000178,6.29e-15,15;UBERON:0000179,6.29e-15,15;UBERON:0000463,6.29e-15,15;UBERON:0004765,8.88e-13,90;UBERON:0001434,3.41e-10,100;UBERON:0003081,6.10e-08,203;UBERON:0002384,3.05e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0,0,0,0.916960868975415,1.06730766284929,0.865818594450472,3.14691421479123,4.98978217526377,3.56077083626975,0,0,0,0.309868802321207,0,0,3.32397245119126,5.81578897663411,7.37836960433896,1.11957737119962,3.56283032620878,0.515151135268373,5.23433659606433,9.82477453590904,6.30718559088322,7.20530014407622,14.3908760807639,11.1494293522237,3.16461631554365,2.81776777182011,1.41889337933151,1.03423704220986,3.22742341791913,2.70852973188684,5.27078550719293,20.7408674043963,6.51698104890745,5.50951006267625,7.38136762275015,6.39337125799041,1.31940520074686,1.99463657621632,0.852449501065388,6.96502172708602,19.8584828641899,3.73693349397345,3.26623264833766,6.25779502104242,2.38907729175628,2.42159801053347,5.89244217580104,1.89877432464531,0.422510572623884,0,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0.800791974072025,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,0,2.80254281490768,2.37045676297569,25.3755603446845,26.7247318669432,36.3914653229131,40.7935048753255,44.9772727954355,45.4509893505344,54.5514839542152,41.4446899612846,30.3444084699082,39.8761010250518,26.5387786489715,57.1287285976511,50.202908158113,54.1000706146094,52.2301533615253,47.2379029748136,66.4323802966031,61.2668496325443,61.6759590449363,35.0125868935479,38.3220493601921,46.0460776946724,36.1818159587889,35.6793264042988,37.7628403236723,30.414465422348,41.2575826273097,42.2355816809581,28.7340671070395,28.650047497326,26.2760959014735,18.7494271199001,16.5812921385775,25.4890950833726,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.785874452986276,0,0,1.9472843619281,1.91542711029194,4.65352861816028,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,3.87780264148325,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0463228654644,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,2.70838706696137,39.0787122782527,27.6453961857035,0,0,0,0,0,0,10.3459279958148,26.9428208080472,49.136763383163,45.9742651400107,54.5367312401961,0.126995788584338,1.14596527667483,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,8.51366464488333,0.502257091432126,21.0833939483032,0,0,0,0,0,0,30.5992443102329,11.0337225713079,15.9564405396043,18.4813972242838,0,0,0,0,0,0.749007023947182,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,11.9925455151275,16.1785650613963,21.132056445082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0,0,0.223874754722178,0.657779629937804,1.3071772551245,0,0,0,0.515205058238611,0.457847324091717,0.247528499761764,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.659006605437454,0,0,0,0,25.3723804616085,26.7623022499831,23.9251818613148,16.6762242820452,9.46133228098247,24.6419858253233,22.1412889267627,17.4487538784739,0,0,0,0.185803175125719,0,21.2714111611758,23.4356620911369,0,0.383010740264733,3.38677732358213,0,0,0,0.156679895773023,7.51903431270201,0.338583555603207,3.37234957717769,1.21079824314629,5.53600108997424,0.687010689511529,0.614481528616916,0.223676107892416,1.16794399198336,18.3664809677918,129.458870861288,8.61611792633986,47.600199411773,3.3307196799782,1.4098700508785,0,0.586032717087576,0,13.2617627290199,0,0,0,0,0,0,0,1.81284261649436,0,1.19548792950642,10.7750727057148,0,0,0,0,0,0,7.67358555340308,0.394573622547734,33.5276329285716,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0,39.8553862963372,1.8837630767403,13.9617812796131,0,0,0,0,10.0130044757639,16.2468509686581,0,0,0,1.99052386215701,0.973033209536731,2.4441205797345,3.85477467284809,4.69542967996711,4.59456577824004,0.269604531922708,1.60515529459758,0,0,0,0,0.789168805698781,3.62972148145992,0.30607276163049,0.252746318513952,0,0,13.9577313268509,20.8524932201564,23.5449688805419,14.3366915727551,1.13843818411917,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,6.16688660910379,0,0,1.17330829640882,0.320635281006135,1.06726497369676,2.99714414373195,0,0,0.343189995723929,0,23.9807393641285,0,7.746539746196,10.669490323858,0,9.2464188768486,0.600420288709789,0,0,0,33.3866939934729,0,0.229160424011684,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.472091293214983,14.4672461031587,0,0,0.714695326373367,0,0,0,0,0,0,99.2498575859508,0,2.03961764736226,0,2.65013777824443,0,0,0,0,2.56289790162467,1.57204305099666,2.48543433208317,7.93865634899121,1.38328142328561,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,8.12372651753693,1.81978941049977,0,3.05845565607623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2496607435179,0,0,0.138258436151731,0.194860308839388,0.398594520940089,0,0,0,0,57.3963826103649,0.853533837553127,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,2.23457967189298,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,6.21323933454091,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.09651553371436,0.496211178389294,0.351742488719241,0,0,0,0,0,0.266107110487916,2.88084968889448,0,0.135939465953663,0,0,0,0.863424021355654,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,1.72090943528111,2.83996801753357,3.06768257132968,0,0,0,0,0,4.02415957822496,1.09726132484042,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,20.5309467250676,1.62065732026684,1.74847648403166,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0.169927114687817,1.50374268767766,6.38133090938414,0,0,0,0,2.19100916473955,4.12856355064087,0,0,0.0679914901909147,0.436350690340377,5.290268405154,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0.0757786982182394,0,0,0,1.49263787330687,4.04709533488359,77.5066918032073,69.3374558684733,0,0.12729431655633,0.808468755832877,0.653150243690884,0,12.2580736486549,1.2192774916755,0.332660356546013,3.17472747582801,0,0,0,0,0.611207220914332,0,0.665756774185513,14.0891655513718,1.28227396921293 | |||
|short_description=p3@LAT | |||
}} |
Latest revision as of 01:58, 16 September 2015
Short description: | p3@LAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAT_5end |
Coexpression cluster: | C3552_acute_leukemia_Mast_CD4_mycosis_thymus_hairy |
Association with transcript: | -5bp_to_ENST00000395456, ENST00000454369, NM_001014987, NM_001014988, NM_014387_5end |
EntrezGene: | LAT |
HGNC: | 18874 |
UniProt: | G5E9K3O43561 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.27e-32 | 98 |
blood island | 3.27e-32 | 98 |
hemolymphoid system | 1.52e-29 | 108 |
immune system | 1.12e-18 | 93 |
bone marrow | 1.06e-16 | 76 |
bone element | 2.27e-15 | 82 |
blood | 6.29e-15 | 15 |
haemolymphatic fluid | 6.29e-15 | 15 |
organism substance | 6.29e-15 | 15 |
skeletal element | 8.88e-13 | 90 |
skeletal system | 3.41e-10 | 100 |
lateral plate mesoderm | 6.10e-08 | 203 |
connective tissue | 3.05e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.02e-09 | 39 |
hematologic cancer | 1.13e-07 | 51 |
immune system cancer | 1.13e-07 | 51 |