FFCP PHASE1:Hg19::chr16:89043500..89043528,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |||
|TSSclassifier=strong | |||
|UniProt=O75081 | |||
|association_with_transcript=0bp_to_NM_005187_5end | |||
|cluster_id=chr16:89043500..89043528,- | |||
|coexpression_cluster_id=C3602 | |||
|description=CAGE_peak_3_at_CBFA2T3_5end | |||
|id=chr16:89043500..89043528,- | |||
|ontology_enrichment_celltype=CL:0000037!1.59e-65!172;CL:0000566!1.59e-65!172;CL:0002032!5.10e-61!165;CL:0000837!5.10e-61!165;CL:0000988!1.37e-59!182;CL:0000763!1.73e-51!112;CL:0000049!1.73e-51!112;CL:0000738!3.24e-36!140;CL:0002031!1.57e-34!124;CL:0002087!1.83e-31!119;CL:0000839!2.07e-26!70;CL:0000557!6.82e-26!71;CL:0000766!1.93e-25!76;CL:0002194!1.50e-20!63;CL:0000576!1.50e-20!63;CL:0000040!1.50e-20!63;CL:0000559!1.50e-20!63;CL:0002009!1.95e-20!65;CL:0002057!3.04e-20!42;CL:0000860!4.25e-18!45;CL:0000945!3.41e-16!24;CL:0000826!3.41e-16!24;CL:0000134!1.52e-12!358;CL:0000236!3.26e-12!14;CL:0002320!1.12e-11!365;CL:0002393!2.64e-10!9;CL:0002397!2.64e-10!9;CL:0000542!2.03e-09!53;CL:0000051!2.03e-09!53;CL:0000838!4.52e-09!52;CL:0000219!4.95e-09!390;CL:0002274!3.91e-07!5;CL:0000457!3.91e-07!5;CL:0002191!3.91e-07!5;CL:0000097!3.91e-07!5;CL:0000831!3.91e-07!5;CL:0002028!3.91e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.46e-19;24!CL:0000236;1.45e-16;13!CL:0000763;8.41e-16;100!CL:0000097;4.15e-11;5!CL:0002393;4.50e-11;6!CL:0002397;4.50e-11;6!CL:0000988;1.40e-10;177!CL:0000766;1.00e-09;69!CL:0000576;2.90e-08;48!CL:0000875;2.88e-07;3!CL:0002396;2.88e-07;3!CL:0000738;6.18e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.88e-66,168;CL:0000988,1.55e-61,177;CL:0002032,9.11e-61,161;CL:0000837,9.11e-61,161;CL:0000763,7.22e-54,108;CL:0000049,7.22e-54,108;CL:0000738,5.45e-30,136;CL:0002031,3.97e-25,120;CL:0002087,2.33e-23,115;CL:0000766,1.16e-19,72;CL:0000134,1.43e-19,354;CL:0000557,3.42e-19,67;CL:0000945,3.72e-19,24;CL:0000826,3.72e-19,24;CL:0002320,9.10e-19,361;CL:0000839,5.22e-18,66;CL:0002393,1.32e-16,9;CL:0002397,1.32e-16,9;CL:0000219,6.05e-16,386;CL:0000236,3.78e-15,14;CL:0000034,3.10e-13,441;CL:0002194,3.63e-13,59;CL:0000576,3.63e-13,59;CL:0000040,3.63e-13,59;CL:0000559,3.63e-13,59;CL:0000048,1.57e-12,427;CL:0002009,1.61e-12,61;CL:0000723,4.61e-12,433;CL:0000097,3.68e-11,5;CL:0002028,3.68e-11,5;CL:0000860,1.12e-10,42;CL:0002057,1.12e-10,42;CL:0000473,7.17e-10,48;CL:0000234,7.17e-10,48;CL:0000838,1.90e-08,52;CL:0000542,3.36e-08,53;CL:0000051,3.36e-08,53;CL:0000875,3.19e-07,3;CL:0002396,3.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000049;5.46e-14;108!CL:0002057;1.72e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!9.46e-32!31;DOID:1240!1.47e-29!39;DOID:2531!3.35e-23!51;DOID:0060083!3.35e-23!51;DOID:1036!5.14e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.54e-52;31!DOID:1240;1.64e-37;39!DOID:2531;1.04e-22;51!DOID:0060083;1.04e-22;51!DOID:1036;5.08e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.90e-54,31;DOID:1240,5.96e-47,39;DOID:2531,1.39e-35,51;DOID:0060083,1.39e-35,51;DOID:1036,4.50e-13,8;DOID:0050686,3.56e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.84e-30!102;UBERON:0003061!5.84e-30!102;UBERON:0002193!1.63e-27!112;UBERON:0002371!5.06e-22!80;UBERON:0001474!2.88e-19!86;UBERON:0007023!6.32e-18!115;UBERON:0002405!2.97e-17!115;UBERON:0004765!1.21e-14!101;UBERON:0001434!1.21e-14!101;UBERON:0002384!2.97e-11!375;UBERON:0003081!2.77e-08!216;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-12;15!UBERON:0000179;1.08e-12;15!UBERON:0000463;1.08e-12;15!UBERON:0002390;1.74e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.28e-28,98;UBERON:0003061,1.28e-28,98;UBERON:0002193,3.27e-26,108;UBERON:0002384,1.13e-17,371;UBERON:0002405,6.79e-17,93;UBERON:0002371,6.81e-16,76;UBERON:0001474,4.15e-14,82;UBERON:0000178,8.08e-13,15;UBERON:0000179,8.08e-13,15;UBERON:0000463,8.08e-13,15;UBERON:0004765,4.08e-12,90;UBERON:0001434,4.23e-10,100;UBERON:0003081,3.48e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,2.79142004129816,3.06972047123349,2.36018566109342,0.383829398097213,2.32224184974114,0,0,0,2.09161441566814,0.142169232487422,0.587200878669695,2.21598163412751,2.4065333696417,3.47217393145363,0.223915474239924,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0.929716147622738,0.822335776043652,1.54853185447552,1.1507695692886,0,0.709446689665756,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0.306083892370903,0.641858054152187,0.639337125799041,1.31940520074686,0.797854630486527,1.70489900213078,0.290209238628584,0,0.622822248995575,0,0,0.65156653411535,0.605399502633369,1.10483290796269,0.632924774881769,4.85887158517466,6.16552469898626,3.98351426465914,2.47122988522289,2.70318407114711,4.33959084082116,9.4054205434612,5.17183360717634,10.2291926108195,5.27988733383968,4.36910889009705,5.33705552318133,2.56038133539904,4.80475184443215,3.4485146397269,3.30522436392431,5.72432252721218,9.10740750575117,4.69789751496751,6.49864487812889,2.64342657158052,1.12101712596307,3.95076127162616,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.97364218096405,1.91542711029194,1.72845348674525,2.38490624305342,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,3.94130590316755,6.51558411697873,13.2689993946094,12.6825559006926,18.6838801471042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,3.8828556147351,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.564862804660675,0,0,0,0,4.56702848308952,3.0585488285695,3.41788312304498,4.04994018278241,1.64544909234478,2.59389324477087,4.86028293514303,6.34500141035416,0,0,0,0.185803175125719,0.721346064882224,1.84968792705877,0,6.58611925728295,5.55365573383863,10.3720055534703,0,2.24637742490767,8.21644844519492,4.38703708164465,17.5444133963047,4.40158622284169,12.5258698580886,11.3007836026987,5.53600108997424,5.15258017133647,3.07240764308458,3.35514161838624,2.83643540910244,9.37862857929793,7.79537286906679,1.23087398947712,12.9818725668472,17.3197423358866,7.04935025439248,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,5.8019622261541,0,0,3.56945935837101,0,0,0,11.2545921449912,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,5.80826948661592,5.318773820805,11.279783030859,12.5480021963353,13.2579053710916,4.74384331810463,16.8472773719201,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,8.94226116468806,0,7.88662062837944,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0,0.182248669974074,0,0,0.157363764404994,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,14.8587462556304,0,0,0.146552233678082,0,0,0.52893040697076,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0.992332043623902,0,0.730755590285376,0,0,0,0,0,0,0,0,0.250381861413,0,0.665574309221114,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,1.64477330057155,0.992422356778588,0,0,0,0,0,0,0.266107110487916,0.806637912890455,0,0.135939465953663,0.0657727735628491,0,0,1.02041020705668,0,0,0,0,0,0.428859265059938,0,0,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.540219106755613,0.655678681511872,0,0.490296643507811,0.235676547101626,0,0,0.8453114551668,0,5.45106724283151,5.80120991762195,0,0,0,0,0,1.83491713361816,0.143339583151451,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.310298987585686,0.852935927603924,0.23806443146374,1.29177819672012,2.48298857183432,0,0,0,0.435433495793923,0,5.388164241167,0.215166616178029,0,0,0,0,0,0,0.733448665097199,0,0,5.83694001413976,4.48795889224526 | |||
|short_description=p3@CBFA2T3 | |||
}} |
Latest revision as of 10:47, 18 September 2015
Short description: | p3@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CBFA2T3_5end |
Coexpression cluster: | C3602_Mast_chronic_leukemia_hairy_acute_biphenotypic_CD14CD16 |
Association with transcript: | 0bp_to_NM_005187_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.28e-28 | 98 |
blood island | 1.28e-28 | 98 |
hemolymphoid system | 3.27e-26 | 108 |
connective tissue | 1.13e-17 | 371 |
immune system | 6.79e-17 | 93 |
bone marrow | 6.81e-16 | 76 |
bone element | 4.15e-14 | 82 |
blood | 8.08e-13 | 15 |
haemolymphatic fluid | 8.08e-13 | 15 |
organism substance | 8.08e-13 | 15 |
skeletal element | 4.08e-12 | 90 |
skeletal system | 4.23e-10 | 100 |
lateral plate mesoderm | 3.48e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.90e-54 | 31 |
leukemia | 5.96e-47 | 39 |
hematologic cancer | 1.39e-35 | 51 |
immune system cancer | 1.39e-35 | 51 |
chronic leukemia | 4.50e-13 | 8 |
organ system cancer | 3.56e-07 | 137 |