FFCP PHASE1:Hg19::chr17:50235999..50236008,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NS85 | |||
|association_with_transcript=123bp_to_ENST00000451037,NM_020178,uc002itw.3_5end | |||
|cluster_id=chr17:50235999..50236008,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_21_at_CA10_5end | |||
|id=chr17:50235999..50236008,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.26e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.68e-73!57;UBERON:0005068!9.68e-73!57;UBERON:0006241!9.68e-73!57;UBERON:0007135!9.68e-73!57;UBERON:0001893!1.86e-64!34;UBERON:0002616!2.60e-60!59;UBERON:0002791!2.80e-60!33;UBERON:0005743!5.71e-60!86;UBERON:0001017!2.36e-59!82;UBERON:0002020!1.41e-58!34;UBERON:0003528!1.41e-58!34;UBERON:0000073!3.55e-57!94;UBERON:0001016!3.55e-57!94;UBERON:0001869!1.27e-56!32;UBERON:0000955!6.13e-54!69;UBERON:0006238!6.13e-54!69;UBERON:0003075!2.40e-53!86;UBERON:0007284!2.40e-53!86;UBERON:0002780!6.91e-53!41;UBERON:0001890!6.91e-53!41;UBERON:0006240!6.91e-53!41;UBERON:0003080!1.53e-51!42;UBERON:0002346!1.04e-50!90;UBERON:0002619!1.13e-46!22;UBERON:0001950!1.13e-44!20;UBERON:0000956!6.65e-41!25;UBERON:0000203!6.65e-41!25;UBERON:0007023!1.50e-38!115;UBERON:0003056!1.61e-37!61;UBERON:0000033!1.72e-32!123;UBERON:0000153!1.05e-30!129;UBERON:0007811!1.05e-30!129;UBERON:0004121!3.10e-29!169;UBERON:0000924!2.06e-28!173;UBERON:0006601!2.06e-28!173;UBERON:0002420!3.98e-26!9;UBERON:0007245!3.98e-26!9;UBERON:0010009!3.98e-26!9;UBERON:0010011!3.98e-26!9;UBERON:0000454!3.98e-26!9;UBERON:0003076!2.06e-21!15;UBERON:0003057!2.06e-21!15;UBERON:0002308!6.39e-19!9;UBERON:0000125!6.39e-19!9;UBERON:0000025!1.35e-18!194;UBERON:0009663!4.19e-17!7;UBERON:0001872!7.02e-17!5;UBERON:0000349!9.72e-17!5;UBERON:0001871!9.90e-16!7;UBERON:0004733!2.27e-15!12;UBERON:0002028!2.27e-15!12;UBERON:0007277!2.27e-15!12;UBERON:0002680!9.32e-15!9;UBERON:0001895!9.32e-15!9;UBERON:0010092!9.32e-15!9;UBERON:0004732!3.85e-14!13;UBERON:0004111!1.05e-13!241;UBERON:0000200!1.44e-13!6;UBERON:0000064!3.70e-13!219;UBERON:0001876!1.31e-11!2;UBERON:0000477!1.56e-11!286;UBERON:0000369!1.72e-11!4;UBERON:0002435!1.72e-11!4;UBERON:0000204!1.72e-11!4;UBERON:0010082!1.72e-11!4;UBERON:0000483!4.21e-11!309;UBERON:0000119!6.27e-11!312;UBERON:0002298!2.59e-10!8;UBERON:0002021!1.38e-09!5;UBERON:0000475!4.09e-09!365;UBERON:0002037!9.02e-09!6;UBERON:0006215!9.02e-09!6;UBERON:0002240!4.66e-08!3;UBERON:0000988!6.80e-08!3;UBERON:0006331!1.63e-07!3;UBERON:0002771!1.93e-07!3;UBERON:0005383!2.42e-07!3;UBERON:0005382!2.42e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;3.09e-70;9!UBERON:0001895;3.09e-70;9!UBERON:0002037;1.10e-59;6!UBERON:0004733;6.02e-53;12!UBERON:0002028;6.02e-53;12!UBERON:0004732;5.93e-49;13!UBERON:0001876;4.66e-21;2!UBERON:0000988;1.96e-14;3!UBERON:0000073;1.36e-13;53!UBERON:0002616;1.36e-13;53!UBERON:0001016;5.22e-10;83!UBERON:0000955;1.61e-09;68!UBERON:0000349;2.97e-09;5!UBERON:0002298;7.01e-08;6!UBERON:0001017;3.71e-07;75!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,3.09e-70,9;UBERON:0001895,3.09e-70,9;UBERON:0010092,3.09e-70,9;UBERON:0002037,9.96e-60,6;UBERON:0006215,9.96e-60,6;UBERON:0004733,6.02e-53,12;UBERON:0002028,6.02e-53,12;UBERON:0007277,6.02e-53,12;UBERON:0004732,5.93e-49,13;UBERON:0003076,1.46e-42,15;UBERON:0003057,1.46e-42,15;UBERON:0001876,4.66e-21,2;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0000988,2.09e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0000349,2.97e-09,5;UBERON:0010314,4.60e-08,132;UBERON:0002298,7.25e-08,6;UBERON:0001871,5.70e-07,6 | |||
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|short_description=p21@CA10 | |||
}} |
Latest revision as of 05:44, 16 September 2015
Short description: | p21@CA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CA10_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 123bp_to_ENST00000451037, NM_020178, uc002itw.3_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | Q9NS85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 3.09e-70 | 9 |
metencephalon | 3.09e-70 | 9 |
future metencephalon | 3.09e-70 | 9 |
cerebellum | 9.96e-60 | 6 |
rhombic lip | 9.96e-60 | 6 |
segmental subdivision of hindbrain | 6.02e-53 | 12 |
hindbrain | 6.02e-53 | 12 |
presumptive hindbrain | 6.02e-53 | 12 |
segmental subdivision of nervous system | 5.93e-49 | 13 |
posterior neural tube | 1.46e-42 | 15 |
chordal neural plate | 1.46e-42 | 15 |
amygdala | 4.66e-21 | 2 |
regional part of nervous system | 6.22e-19 | 53 |
regional part of brain | 6.22e-19 | 53 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
pons | 2.09e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
limbic system | 2.97e-09 | 5 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |
brainstem | 7.25e-08 | 6 |
temporal lobe | 5.70e-07 | 6 |