FFCP PHASE1:Hg19::chr18:3461852..3461856,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:3461852..3461856,+ | |||
|description=CAGE_peak_at_chr18:3461852..3461856,+ | |||
|id=chr18:3461852..3461856,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.20e-15!45;CL:0002057!2.34e-15!42;CL:0000839!7.06e-10!70;CL:0000557!9.33e-10!71;CL:0002009!1.78e-09!65;CL:0002194!3.42e-09!63;CL:0000576!3.42e-09!63;CL:0000040!3.42e-09!63;CL:0000559!3.42e-09!63;CL:0000548!3.68e-09!679;CL:0000004!3.68e-09!679;CL:0000255!3.68e-09!679;CL:0000012!7.06e-09!682;CL:0000766!1.22e-07!76;CL:0000063!1.26e-07!578;CL:0000066!4.79e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-53;33!CL:0002057;2.06e-53;33!CL:0000473;4.19e-37;39!CL:0000234;4.19e-37;39!CL:0000576;2.87e-26;48!CL:0000766;4.62e-17;69!CL:0002591;6.05e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.31e-44,42;CL:0002057,8.31e-44,42;CL:0000473,4.99e-38,48;CL:0000234,4.99e-38,48;CL:0002194,6.22e-30,59;CL:0000576,6.22e-30,59;CL:0000040,6.22e-30,59;CL:0000559,6.22e-30,59;CL:0002009,6.91e-29,61;CL:0000839,1.51e-26,66;CL:0000557,4.05e-26,67;CL:0000766,3.69e-24,72;CL:0000763,2.43e-15,108;CL:0000049,2.43e-15,108;CL:0002087,2.92e-14,115;CL:0002031,1.45e-13,120;CL:0000738,1.12e-11,136;CL:0002591,8.24e-10,1;CL:0002032,1.78e-09,161;CL:0000837,1.78e-09,161;CL:0000037,5.64e-09,168;CL:0000988,2.17e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-33;42!UBERON:0003099;2.16e-10;1!UBERON:0003852;2.16e-10;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.35e-07!143;DOID:305!1.54e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!5.06e-09!86;UBERON:0002371!1.05e-08!80;UBERON:0002193!5.80e-08!112;UBERON:0002390!6.13e-07!102;UBERON:0003061!6.13e-07!102;UBERON:0002405!9.61e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;2.16e-10;1!UBERON:0008193;2.16e-10;1!UBERON:0010912;2.16e-10;1!UBERON:0002514;2.16e-10;1!UBERON:0003457;2.16e-10;1!UBERON:0008907;2.16e-10;1!UBERON:0008001;2.16e-10;1!UBERON:0007213;2.16e-10;1!UBERON:0009891;2.16e-10;1!UBERON:0007914;2.16e-10;1!UBERON:0007375;2.16e-10;1!UBERON:0003323;2.16e-10;1!UBERON:0010258;2.16e-10;1!UBERON:0005253;2.16e-10;1!UBERON:0007842;2.16e-10;1!UBERON:0002397;2.16e-10;1!UBERON:0003113;2.16e-10;1!UBERON:0003277;2.16e-10;1!UBERON:0001709;2.16e-10;1!UBERON:0002244;2.16e-10;1!UBERON:0005620;2.16e-10;1!UBERON:0010364;2.16e-10;1!UBERON:0004288;2.16e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.24e-24,82;UBERON:0002371,8.97e-23,76;UBERON:0004765,9.58e-22,90;UBERON:0002390,1.19e-19,98;UBERON:0003061,1.19e-19,98;UBERON:0001434,2.52e-19,100;UBERON:0002405,3.38e-18,93;UBERON:0002193,1.34e-17,108;UBERON:0002204,8.55e-14,167;UBERON:0003081,9.38e-11,203;UBERON:0005705,1.80e-10,1;UBERON:0008193,1.80e-10,1;UBERON:0010912,1.80e-10,1;UBERON:0002514,1.80e-10,1;UBERON:0003457,1.80e-10,1;UBERON:0008907,1.80e-10,1;UBERON:0008001,1.80e-10,1;UBERON:0007213,1.80e-10,1;UBERON:0009891,1.80e-10,1;UBERON:0007914,1.80e-10,1;UBERON:0009292,1.80e-10,1;UBERON:0003099,1.80e-10,1;UBERON:0007375,1.80e-10,1;UBERON:0003323,1.80e-10,1;UBERON:0010258,1.80e-10,1;UBERON:0007842,1.80e-10,1;UBERON:0009494,1.80e-10,1;UBERON:0010042,1.80e-10,1;UBERON:0010045,1.80e-10,1;UBERON:0010259,1.80e-10,1;UBERON:0010359,1.80e-10,1;UBERON:0009526,1.80e-10,1;UBERON:0002397,1.80e-10,1;UBERON:0003113,1.80e-10,1;UBERON:0003277,1.80e-10,1;UBERON:0001709,1.80e-10,1;UBERON:0004066,1.80e-10,1;UBERON:0002244,1.80e-10,1;UBERON:0005620,1.80e-10,1;UBERON:0004362,1.80e-10,1;UBERON:0010364,1.80e-10,1;UBERON:0010046,1.80e-10,1;UBERON:0005868,1.80e-10,1;UBERON:0007238,1.80e-10,1;UBERON:0004288,1.80e-10,1;UBERON:0004068,1.80e-10,1;UBERON:0010334,1.80e-10,1;UBERON:0003852,1.80e-10,1;UBERON:0010253,1.80e-10,1;UBERON:0010188,9.15e-07,6;UBERON:0002539,9.15e-07,6;UBERON:0008816,9.15e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872389432677388,1.13362783106643,1.4555043671269,0.929716147622738,2.05583944010913,2.16794459626573,1.1507695692886,1.2808035326455,0,1.03423704220986,0.645484683583826,0,0.564727018627814,2.18324920046277,0.898893937780338,0.306083892370903,0.962787081228281,1.27867425159808,0,1.19678194572979,0.426224750532694,0.580418477257168,0.56738522469114,1.86846674698672,1.25624332628372,2.60741459210101,1.08594422352558,0.605399502633369,0.736555271975129,1.26584954976354,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0,0.66944122552934,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0,0,0,0,0.538842688278752,0,0,0,0,0,0.570471821544449,0,0,0.323745888736263,0.140450806702248,0.816616685019573,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.330881918197182,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0.985326475791887,0.088048434013226,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.224170287987055,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.368323955743585,0,0.364182336013434,0,0,0,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0.650756789328606,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.576570202095319,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,1.08006287447623,0,0.320472213382419,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0.16480387422676,0.422250816255987,0,0,0,0,0,0.311039587661807,0.179736702294654,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0.448788222048861,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0.30607276163049,0,0,0.414752765588989,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0.347119476670262,0.293977192243133,0,0,0,0,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.288180834308212,2.06165873098648,0,0.864328787928898,0,0.235694034616795,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.275078873194468,0.415440338029185,0,0.77380195455795,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0.457680136793847,0,0.15543720058278,0,0,0.899606224327209,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0.97894681802587,0,0,0,0,0.578742114812744,0.337884881306145,0.512483037175893,0,0,0,0.584580926518165,0.132864840313363,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0.637724760305049,0.495743057036009,0,0.318004350653419,0,0,2.46873160583479,0,0,0,0,0,0,0,0,0,1.57036349601641,0.11796972334774,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0.523813388962845,0.655087670040387,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0.281951753939561,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.546327859818478,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0.320182037633146,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr18:3461852..3461856,+ | |||
}} |
Latest revision as of 00:43, 26 July 2015
Short description: | p@chr18:3461852..3461856, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3461852..3461856, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.31e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.31e-44 | 42 |
defensive cell | 4.99e-38 | 48 |
phagocyte | 4.99e-38 | 48 |
monopoietic cell | 6.22e-30 | 59 |
monocyte | 6.22e-30 | 59 |
monoblast | 6.22e-30 | 59 |
promonocyte | 6.22e-30 | 59 |
macrophage dendritic cell progenitor | 6.91e-29 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-26 | 66 |
granulocyte monocyte progenitor cell | 4.05e-26 | 67 |
myeloid leukocyte | 3.69e-24 | 72 |
myeloid cell | 2.43e-15 | 108 |
common myeloid progenitor | 2.43e-15 | 108 |
nongranular leukocyte | 2.92e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.45e-13 | 120 |
leukocyte | 1.12e-11 | 136 |
smooth muscle cell of the pulmonary artery | 8.24e-10 | 1 |
hematopoietic oligopotent progenitor cell | 1.78e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-09 | 161 |
hematopoietic stem cell | 5.64e-09 | 168 |
hematopoietic cell | 2.17e-08 | 177 |