FFCP PHASE1:Hg19::chr20:30433396..30433414,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3735 | |||
|TSSclassifier=strong | |||
|UniProt=O43638 | |||
|association_with_transcript=5bp_to_ENST00000375978,NM_004118,uc002wwt.1_5end | |||
|cluster_id=chr20:30433396..30433414,- | |||
|description=CAGE_peak_1_at_FOXS1_5end | |||
|id=chr20:30433396..30433414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.32e-07;7!CL:0000126;5.32e-07;7!CL:0000127;5.32e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.77e-07,7;CL:0000126,4.77e-07,7;CL:0000127,4.77e-07,7;CL:0002453,4.77e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.58e-28!115;UBERON:0005743!4.32e-19!86;UBERON:0003075!5.50e-19!86;UBERON:0007284!5.50e-19!86;UBERON:0001017!1.92e-18!82;UBERON:0002346!4.76e-17!90;UBERON:0000073!7.51e-17!94;UBERON:0001016!7.51e-17!94;UBERON:0002616!3.88e-16!59;UBERON:0001049!5.07e-16!57;UBERON:0005068!5.07e-16!57;UBERON:0006241!5.07e-16!57;UBERON:0007135!5.07e-16!57;UBERON:0000955!5.28e-16!69;UBERON:0006238!5.28e-16!69;UBERON:0000153!1.67e-14!129;UBERON:0007811!1.67e-14!129;UBERON:0000481!5.27e-14!347;UBERON:0000475!9.80e-14!365;UBERON:0000033!1.04e-13!123;UBERON:0000025!1.24e-13!194;UBERON:0004121!8.16e-13!169;UBERON:0003056!1.96e-12!61;UBERON:0000477!3.13e-12!286;UBERON:0000924!7.73e-12!173;UBERON:0006601!7.73e-12!173;UBERON:0000119!2.21e-11!312;UBERON:0003080!2.54e-11!42;UBERON:0002780!1.01e-10!41;UBERON:0001890!1.01e-10!41;UBERON:0006240!1.01e-10!41;UBERON:0000483!1.39e-10!309;UBERON:0004111!2.10e-10!241;UBERON:0001893!9.04e-10!34;UBERON:0002791!2.23e-09!33;UBERON:0003103!2.35e-09!69;UBERON:0002020!2.36e-09!34;UBERON:0003528!2.36e-09!34;UBERON:0001869!3.79e-09!32;UBERON:0000468!2.04e-08!659;UBERON:0000956!3.93e-08!25;UBERON:0000203!3.93e-08!25;UBERON:0000922!1.18e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.87e-07;114!UBERON:0007100;2.06e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.50e-23,114;UBERON:0010314,3.01e-14,132;UBERON:0003075,1.49e-11,82;UBERON:0007284,1.49e-11,82;UBERON:0001017,1.12e-10,81;UBERON:0002346,1.93e-10,86;UBERON:0001016,6.86e-10,89;UBERON:0003103,2.25e-09,68;UBERON:0000025,3.88e-09,192;UBERON:0004121,1.47e-08,171;UBERON:0000924,1.47e-08,171;UBERON:0006601,1.47e-08,171;UBERON:0010371,2.20e-08,104;UBERON:0003056,3.80e-08,61;UBERON:0000955,5.23e-08,68;UBERON:0006238,5.23e-08,68;UBERON:0001049,9.11e-08,56;UBERON:0005068,9.11e-08,56;UBERON:0006241,9.11e-08,56;UBERON:0007135,9.11e-08,56;UBERON:0000119,9.69e-08,309;UBERON:0004111,1.63e-07,240;UBERON:0007100,1.73e-07,27;UBERON:0000073,4.39e-07,53;UBERON:0002616,4.39e-07,53;UBERON:0000483,5.52e-07,306 | |||
|phase1_expression=3.27021082687002,0,0.281908808191942,1.0007329835313,0,2.61701557230111,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,1.20538905604795,0.730310090387373,0,8.86471618152873,7.34402488479311,2.82109249330279,5.72471974262113,5.33810257784248,18.5803106600308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0.50133791063589,0,8.74814541756209,0.486634870302636,14.2747573917742,21.7294809513313,21.6951920662021,7.53129684111848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,13.9152146474689,16.58859702806,0,0,0.354668382198357,3.36406560085384,54.4419878221495,38.2334700046598,0,3.50247747381189,2.12500474047496,6.81108424402191,21.31850920576,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,2.45190236639216,0.600952235626387,6.35220225696118,0.179389635688862,0.213557388818567,0,0,0,2.57640540045629,2.60563598864226,0.168776332241266,0.194874010322397,0,0,0,0,0,0.508681776931463,0,0,0,0.121973706129595,0,0.69716365721711,1.65857688024593,1.26160425437814,0,0,0.643240938192885,4.14404764057442,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,6.34800898104545,0,0,0,0.0925884451585296,0,0,4.3299402607582,1.85488647960123,17.6113041353732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,3.4214489204541,0,0,0,3.36393253036082,1.30788020649984,6.67378400970645,0.129271715757778,14.3062578340753,2.535908257668,3.19125739901845,0,0,0,0,0,0,0,1.95441710576241,0,0,0,0.871533458600294,0.399891964728228,0,0.502257091432126,0,51.2797190751987,33.309961391893,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,1.54657762555539,2.68026024534958,2.55175500661265,0,0,0,0.12269149171914,0,0,1.45579603071565,0,0.946214490203608,0.117141414992713,0.300946099727719,6.82222512167955,0,1.99267679560631,0.921845842708516,0,3.52442083432933,1.02943027143257,0,0,0,0,0,0.30239029332968,7.69134204238208,3.99001130548962,4.49056151092918,0.640695746278505,1.53512174720011,0.965123526861645,2.96836132889982,0.616838775210622,0.532685175939381,0,0,0.116210378459959,0,0,0,0,0,0,1.35359883872224,0.385076685522074,0.784349769176855,8.76835347919564,2.11103257785751,0,0,0.431831832204279,1.54227252690289,4.06419656315779,9.53210570324221,0.254876273045038,0,0,0,0,0,0.656029291399411,2.60302715731442,4.12164046590889,0.366277859273374,0.082509499920588,3.44559322797703,0,0,0.193341436584244,0,0,0.689182862422653,0,0,0.255679882248303,5.2528901031575,0,0,0,0,0,0,0,0.616067160352178,21.8245472429979,0,4.07713282028624,39.6455936275316,0.372158369359667,5.06207079549961,0,0,0,0,9.41938368239076,0.359744915166629,0,0,20.2182481573316,11.0957224821106,0,0.975267478179181,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0,19.2397302819954,23.2378969184494,0,0.655894752046633,4.66693867014219,3.0982349809975,11.8312153063541,0.286822704408103,0,2.1400263088875,0,0,0,0,0,0,0,0,3.67160823029439,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61928026063815,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,1.40669416410513,0.222617410045812,0,0,85.2781389714578,0.828851746593443,0,1.43176155503017,0,0.933118762985422,0,0,0,3.74844941420348,0,0,13.5706584453331,1.11321717794222,5.98841394003583,0,0,10.1499940560871,0,0,0,0,0,0.520874984799877,0,0.844175070377856,0,0.331737779793674,4.43321428430321,6.58156191461918,0,0,8.31062791841008,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.50377859655677,6.72133159426988,0,0,0,3.77446344691791,8.02577647298789,2.57690890297873,0,0,0,1.97292201424695,9.67925728389311,2.44858209304392,4.23350083510869,0,0,0,0,0,0,1.70765727617876,79.7379369825547,0,0.0979923974143777,0,5.06707337901887,0.171986032471617,0,0,0,2.5217144286989,0,12.8809022244904,0.274083849293502,0,4.05189094117624,0,0.0801588202515337,9.81883775801022,0.799238438328521,0,0,0,0,0,0,0.407712618220842,0.313808538937,0,0,0.600420288709789,0.684526894459965,0,2.14882720709979,0,6.7027776305341,7.79145441639724,0,4.5926170114768,4.29226048136571,3.12440040418622,9.00258531322132,3.60299883542404,0,0.0787831823072236,0,0,0,0.0846733320657845,0,1.49823746722733,0,0,0,0,0,3.76647251279753,0,2.83700546277113,5.92736845925479,0,0,0,15.0086018538407,1.32418394073086,2.28841683889275,0,0,0,1.19730191562487,0,0,0,0.293104467356165,3.97520666736664,0.775697738169303,0.79339561045614,0,0,3.41719720216623,5.65935498358797,7.04206394090232,1.48849806543585,0,0,0,0.544017803369474,1.0027595760908,0.306345576763462,0.327872630709804,0,0.886068179966986,0.488105059607853,0.751145584238999,1.14681839138014,0.665574309221114,5.77496547354866,0,0.249960815924213,0,0,0,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| |||
|short_description=p1@FOXS1 | |||
}} |
Latest revision as of 01:30, 25 September 2015
Short description: | p1@FOXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000375978, NM_004118, uc002wwt.1_5end |
EntrezGene: | FOXS1 |
HGNC: | 3735 |
UniProt: | O43638 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.77e-07 | 7 |
macroglial cell | 4.77e-07 | 7 |
astrocyte | 4.77e-07 | 7 |
oligodendrocyte precursor cell | 4.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.50e-23 | 114 |
structure with developmental contribution from neural crest | 3.01e-14 | 132 |
neural plate | 1.49e-11 | 82 |
presumptive neural plate | 1.49e-11 | 82 |
central nervous system | 1.12e-10 | 81 |
neurectoderm | 1.93e-10 | 86 |
nervous system | 6.86e-10 | 89 |
compound organ | 2.25e-09 | 68 |
tube | 3.88e-09 | 192 |
ectoderm-derived structure | 1.47e-08 | 171 |
ectoderm | 1.47e-08 | 171 |
presumptive ectoderm | 1.47e-08 | 171 |
ecto-epithelium | 2.20e-08 | 104 |
pre-chordal neural plate | 3.80e-08 | 61 |
brain | 5.23e-08 | 68 |
future brain | 5.23e-08 | 68 |
neural tube | 9.11e-08 | 56 |
neural rod | 9.11e-08 | 56 |
future spinal cord | 9.11e-08 | 56 |
neural keel | 9.11e-08 | 56 |
cell layer | 9.69e-08 | 309 |
anatomical conduit | 1.63e-07 | 240 |
primary circulatory organ | 1.73e-07 | 27 |
regional part of nervous system | 4.39e-07 | 53 |
regional part of brain | 4.39e-07 | 53 |
epithelium | 5.52e-07 | 306 |