FFCP PHASE1:Hg19::chr20:53092123..53092149,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16173 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P104 | |||
|association_with_transcript=0bp_to_ENST00000262593_5end | |||
|cluster_id=chr20:53092123..53092149,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_DOK5_5end | |||
|id=chr20:53092123..53092149,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.75e-30!180;CL:0000393!2.29e-15!60;CL:0000211!2.29e-15!60;CL:0000183!4.47e-13!59;CL:0000680!1.16e-12!57;CL:0000056!1.16e-12!57;CL:0000355!1.16e-12!57;CL:0000187!2.11e-12!54;CL:0000057!1.38e-11!75;CL:0000192!2.83e-09!42;CL:0000514!2.83e-09!42;CL:0000222!4.20e-09!119;CL:0000359!3.12e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000393;7.58e-09;61!CL:0000211;7.58e-09;61!CL:0000187;1.73e-07;55!CL:0000192;2.55e-07;43!CL:0002570;9.45e-07;8!CL:0000359;9.80e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.66e-17,61;CL:0000211,7.66e-17,61;CL:0000187,2.24e-13,55;CL:0000680,3.74e-13,58;CL:0000056,3.74e-13,58;CL:0000355,3.74e-13,58;CL:0000057,1.58e-09,76;CL:0000192,1.98e-09,43;CL:0000514,1.98e-09,43;CL:0000222,3.63e-08,121;CL:0000359,3.17e-07,32;CL:0000047,3.22e-07,8;CL:0002570,7.86e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;1.56e-07;58!CL:0000514;2.55e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.33e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.50e-15!83;UBERON:0002329!1.50e-15!83;UBERON:0003077!1.50e-15!83;UBERON:0003059!1.50e-15!83;UBERON:0007282!1.50e-15!83;UBERON:0009618!1.50e-15!83;UBERON:0007285!1.50e-15!83;UBERON:0001134!1.79e-14!61;UBERON:0002036!1.79e-14!61;UBERON:0003082!1.79e-14!61;UBERON:0004290!2.35e-14!70;UBERON:0002385!1.04e-13!63;UBERON:0001015!1.04e-13!63;UBERON:0000383!1.04e-13!63;UBERON:0000119!3.41e-13!312;UBERON:0000483!7.29e-13!309;UBERON:0004872!3.55e-12!84;UBERON:0000025!5.86e-12!194;UBERON:0002049!3.42e-11!79;UBERON:0007798!3.42e-11!79;UBERON:0000073!1.42e-10!94;UBERON:0001016!1.42e-10!94;UBERON:0000477!1.64e-10!286;UBERON:0005743!2.26e-10!86;UBERON:0001017!2.31e-10!82;UBERON:0000486!3.07e-10!82;UBERON:0001009!5.15e-10!113;UBERON:0005256!1.18e-09!143;UBERON:0004535!1.42e-09!110;UBERON:0000475!1.53e-09!365;UBERON:0000468!1.58e-09!659;UBERON:0000481!2.11e-09!347;UBERON:0004111!2.32e-09!241;UBERON:0003914!9.80e-09!118;UBERON:0001981!1.22e-08!60;UBERON:0007500!1.22e-08!60;UBERON:0004537!1.22e-08!60;UBERON:0006965!1.22e-08!60;UBERON:0000055!1.56e-08!69;UBERON:0007100!1.59e-08!27;UBERON:0001637!2.81e-08!42;UBERON:0003509!2.81e-08!42;UBERON:0004572!2.81e-08!42;UBERON:0000948!3.74e-08!24;UBERON:0005498!3.74e-08!24;UBERON:0004140!3.74e-08!24;UBERON:0009881!3.74e-08!24;UBERON:0004141!3.74e-08!24;UBERON:0003084!3.74e-08!24;UBERON:0007005!3.74e-08!24;UBERON:0004139!3.74e-08!24;UBERON:0004291!3.74e-08!24;UBERON:0002346!4.48e-08!90;UBERON:0003075!9.20e-08!86;UBERON:0007284!9.20e-08!86;UBERON:0000924!1.30e-07!173;UBERON:0006601!1.30e-07!173;UBERON:0002616!1.45e-07!59;UBERON:0004573!2.02e-07!33;UBERON:0004571!2.02e-07!33;UBERON:0004121!2.66e-07!169;UBERON:0003103!2.89e-07!69;UBERON:0002020!4.64e-07!34;UBERON:0003528!4.64e-07!34;UBERON:0001049!5.11e-07!57;UBERON:0005068!5.11e-07!57;UBERON:0006241!5.11e-07!57;UBERON:0007135!5.11e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.59e-07;25!UBERON:0000948;1.77e-07;22!UBERON:0004573;3.75e-07;33!UBERON:0004571;3.75e-07;33!UBERON:0002385;7.89e-07;31!UBERON:0001015;7.89e-07;31!UBERON:0000383;7.89e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.03e-15,62;UBERON:0002036,3.03e-15,62;UBERON:0003082,3.03e-15,62;UBERON:0007524,1.72e-14,73;UBERON:0002329,2.59e-14,71;UBERON:0003059,2.59e-14,71;UBERON:0007282,2.59e-14,71;UBERON:0004290,2.59e-14,71;UBERON:0009618,2.59e-14,71;UBERON:0002385,3.07e-14,64;UBERON:0001015,3.07e-14,64;UBERON:0000383,3.07e-14,64;UBERON:0003077,7.20e-14,72;UBERON:0007285,7.20e-14,72;UBERON:0007503,6.24e-13,78;UBERON:0004872,1.77e-11,83;UBERON:0000483,2.98e-11,306;UBERON:0000119,3.68e-11,309;UBERON:0000486,5.29e-11,83;UBERON:0002049,1.16e-10,78;UBERON:0007798,1.16e-10,78;UBERON:0010314,1.35e-10,132;UBERON:0001009,1.99e-10,112;UBERON:0004535,3.45e-10,109;UBERON:0003104,1.03e-08,160;UBERON:0009142,1.03e-08,160;UBERON:0000025,1.70e-08,192;UBERON:0004573,1.81e-08,33;UBERON:0004571,1.81e-08,33;UBERON:0007100,1.89e-08,27;UBERON:0000948,1.89e-08,24;UBERON:0005498,1.89e-08,24;UBERON:0004140,1.89e-08,24;UBERON:0009881,1.89e-08,24;UBERON:0004141,1.89e-08,24;UBERON:0003084,1.89e-08,24;UBERON:0007005,1.89e-08,24;UBERON:0004139,1.89e-08,24;UBERON:0004291,1.89e-08,24;UBERON:0007500,4.75e-08,59;UBERON:0001981,4.75e-08,59;UBERON:0004537,4.75e-08,59;UBERON:0006965,4.75e-08,59;UBERON:0003914,5.51e-08,117;UBERON:0001637,5.74e-08,42;UBERON:0003509,5.74e-08,42;UBERON:0004572,5.74e-08,42;UBERON:0000055,8.39e-08,68;UBERON:0001017,1.09e-07,81;UBERON:0001016,1.11e-07,89;UBERON:0000490,4.53e-07,148;UBERON:0005256,8.43e-07,122 | |||
|phase1_expression=2.18014055124668,1.49870366723688,0.563817616383885,1.0007329835313,0.446961094427288,0.872338524100369,0,0,1.04474251279935,1.96587149201207,0.697801167972428,0.655324116390517,1.58260186937072,3.7129905888014,5.30235801164665,0,0,0,0,10.3421688784502,14.484049078342,38.8683854632829,17.7466312021255,8.75996320466459,17.5759695432724,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,7.79961627245535,7.95166135246046,4.51204119572301,3.62116297402059,0,2.91980922181582,1.51255707462509,1.55210578223795,2.45937399940753,0.654895377488563,0,0,0,0,0,0,0,0,1.98762407366705,3.4409383804245,1.38856200643038,3.95715559346807,1.67799774483962,0,0.626984899610432,1.03366703667732,2.13459757612026,0.33472061276467,0,0,0,1.83831540172934,0,2.05389375053383,3.59246996201872,4.50445921933289,3.06633274931766,0,0.549605231791222,0,0,0,3.97577561356255,13.1695732131163,0.397227542439656,11.1866282092037,12.4133933769425,5.60677600142307,1.06748995729705,0.98667019366864,4.66816553099649,2.02066008104532,2.28846664358842,1.36221684880438,2.30470369792,1.40592859100278,0,0.570471821544449,0.298897361103602,9.27732539285743,16.3491673811813,12.9214742166069,1.42907919878425,0.859840221182376,1.44656093646072,0,1.7308685049499,5.46096817162816,7.90479955997862,1.34668891163253,3.503318556415,1.10825646193673,0.877955241761676,3.37136575378922,4.05642759047811,3.62982986112067,1.07633781413317,0,0,0,0,1.28820270022815,1.11670113798954,3.71307930930786,3.80004320128675,1.51460264546469,0.828449087780694,3.39456719319505,0,0.604512589365842,1.18692414617341,0,0,0,2.19552671033272,2.38553582978673,3.25343040034651,3.42081481550722,4.28945446488568,1.45990943630332,0,0.643240938192885,0,2.78620756819187,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,7.4083322039652,13.2307840246988,0,0,0,0,0,1.88724591328378,0,0,0,0,0.651616610620649,0,0,2.66639931442677,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0.63497894292169,0,1.17217447210047,0,0.205654985406647,0,1.71495859578347,0.897048674762886,2.1798003441664,0.22001485746285,1.93907573636667,3.57656445851882,3.381211010224,0,0,3.08648849114571,0,1.8649552531127,1.85871391755592,0,1.64648067356154,2.93162565864362,1.42156779497018,0,2.71295439353627,0.871533458600294,4.39881161201051,0,0,0,1.91699884393266,2.29723871668228,0,1.01346914667305,1.43833425785268,0.895304816199478,0,0,0,0,7.36874410245144,36.4391590801341,23.1986643833309,36.6860621082224,35.7245700925771,0,0,0,2.4538298343828,5.50187573165645,7.05289061619313,8.7347761842939,8.74302045106093,4.1002627908823,2.81139395982512,3.31040709700491,4.5481500811197,4.1389228517002,3.32112799267718,8.11224341583494,0.260650843404249,2.15381273209015,2.74514739048685,0,0,0,0,1.66435439510497,1.81434175997808,3.72161711728165,3.22270143904931,3.36792113319688,1.15325234330131,1.53512174720011,3.21707842287215,5.93672265779964,4.93471020168498,6.39222211127257,5.17401082886998,0.519254429183621,7.78609535681727,0,0,0,1.49258782613989,0,0,0.451199612907412,2.0794141018192,0.784349769176855,1.46139224653261,1.79437769117889,0,0,0,0,1.62567862526312,4.51520796469368,1.01950509218015,7.47968408035852,0.671624264166535,0,0,0.256450125116389,0,1.62689197332152,0,0,0,0,0,9.64103579064957,6.47693812557217,2.92692372517824,2.91656981979646,5.37562632689669,3.86712881525785,2.46528379654188,3.49429172406014,6.05417842397814,0,0,0,0.10115778085555,8.36721988735114,2.51849877464512,2.0911118104818,1.84820148105653,4.25844824253617,2.60979897622522,0.37064843820784,2.86249773483982,1.86079184679834,1.58189712359363,3.24071329670502,11.0036050263874,4.70732886837312,3.5002357271853,1.56989728039846,1.43897966066652,3.56898138656871,5.30155810555589,6.87420437349274,4.75530963519025,1.26377536871694,0,2.19342140668156,3.16950440270266,0.272999822815972,0.707027159768564,12.4308928282267,2.75682671773062,3.98063385144732,4.82295973779139,4.05142873986681,2.62357900818653,0.202910376962704,0.92947049429925,4.22543403798362,7.45739031461068,2.84922218938051,0.35667105148125,4.61189383291777,2.74439925886963,1.64647446479951,1.51789269506286,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69983884210687,0,0,0,0,0,0,7.85172017542703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.73254089635947,0.121360521749513,0,0,4.05865624054073,0.593929361665277,0.921482106297696,1.9882952955326,2.11004124615769,1.11308705022906,0,0,1.59398390600856,0.276283915531148,0,0,0,4.3545542272653,0,0,0,0.591860433821602,0,0,3.87733098438087,0.834912883456661,139.729658600836,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,1.77148277162768,1.32656082487949,0,0.110579259931225,0,1.97446857438575,0,0,0.538651809526579,0.455768223388005,0,0,0,1.27600463892768,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,1.14581926067151,7.2231988256891,0,0,0,0,0.394584402849391,1.20990716048664,101.616156861323,2.46427660551103,0,0,0,0,0.313932918407225,0,3.13070500632772,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0.0882561266915003,4.29363407483012,0,0,0.633107959558787,0.195551382734803,0,1.06726497369676,0,0,0,0,0,0.49701014226173,0,0,0,0.101998217636322,0,1.80126086612937,0.410716136675979,0,1.28929632425987,0,1.67569440763353,0.458320848023367,2.15361907373044,3.59422200898184,1.28767814440971,0.446342914883745,1.07493555978762,1.08089965062721,0,0,0,0,0,0,0.795229689809303,1.22583065500418,4.01882871162548,3.71356478812531,2.07720169014593,0,0,1.03274246318642,0,0.394028536495991,1.83591058472493,0,0,0,4.2881719582402,1.32418394073086,0,2.71499800876856,2.5926644736038,0,0,0,1.02232813071253,0.226624183040251,0,0,2.32709321450791,2.38018683136842,0.171086837884329,0,0.533937062838473,0.628817220398664,0,0,0,0,0,0,0.5013797880454,0.919036730290385,0.327872630709804,0,0.886068179966986,0.122026264901963,0.751145584238999,1.72022758707021,1.22021956690538,1.36612086471044,0.553394539744923,0,1.06154382279153,0.285465333544967,0,0,0,5.07466329815372,7.94625253480563,10.5413113685497,4.54567212660214,3.27038272278348,7.11848977277229,3.20376095755693,10.5861646634267,3.26418121223839,1.92211694986524,2.38945150745554,1.79921244865442,1.55262956876259,8.29412415681711,3.72178400381193,0,4.50772826991655,3.04644169735036,4.06870733204662,2.72772988803839,5.37052785212442,5.56840511854192,1.99047944349308,0,8.58489262956982,9.76573517421165,0,0,1.28664954824955,0.260994291965212,0,0,0,0,0.308801447160972,0,0.706756583783524,1.92914038270915,0.675769762612291,0.512483037175893,0,0,1.10606748921385,0.779441235357554,0.664324201566815,0,0,0,0,0,0,0,0,4.9708606567997,0,0,2.04630994085843,0.539124056983409,0.786329709279482,0,0,1.70059936081346,5.20530209887809,1.67593475391973,6.36008701306837,0,0,9.87492642333915,0,0.899209151350433,1.41696576325585,1.27707087245721,2.05116364240755,134.606285782397,0.96820153449905,0.161475645631851,5.71077681036618,0,0,0,0,1.90691047733584,2.0710797781803,1.79024599904647,0.902523940191087,3.0255760305528,0,0,0.49131575253029,0,1.01306376927592,0,1.03343398250592,0.887821342714695,104.47218852248,0,0.992422356778588,1.05522746615772,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,1.22345519358297,0.986591603442736,0,0,0.313972371402056,1.25692471932802,0,3.65263488203798,1.51149313853035,0,2.287249413653,0,0,0.521574816907738,0,0,0,0,0,0,0,0.423387050190929,5.9567785821453,0.31020638566432,0,3.35566295393377,0,0.121917924982269,2.58971534875158,3.18254701254366,44.0729483908516,6.31424290976881,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.655678681511872,0,0,0,1.37415926980462,0.297046400327086,6.7624916413344,7.30686593157613,0,0.709036767709349,0,0,0,0,1.46067277649303,0.458729283404541,0.716697915757256,0,1.01987235286372,185.01269270432,0.5290268405154,1.11598505450025,0.462175628631418,6.48939843185684,0,0.218531143927391,2.02717601618299,0.61193297845189,0,0.18378979906969,0,0.227336094654718,0.267964130156178,2.48750831837634,0.517164979309476,0.639701945702943,6.90386851244847,0,0,11.885977433545,0.827413057616144,1.21270313374932,1.52401723527873,7.87136592496146,0.202056159043763,0.932388670104793,5.32256570473621,0,0,0,0,0,0.611207220914332,0.813792356631477,1.99727032255654,0.201273793591026,0 | |||
|short_description=p3@DOK5 | |||
}} |
Latest revision as of 02:44, 17 September 2015
Short description: | p3@DOK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DOK5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000262593_5end |
EntrezGene: | DOK5 |
HGNC: | 16173 |
UniProt: | Q9P104 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.66e-17 | 61 |
electrically active cell | 7.66e-17 | 61 |
muscle cell | 2.24e-13 | 55 |
muscle precursor cell | 3.74e-13 | 58 |
myoblast | 3.74e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.74e-13 | 58 |
fibroblast | 1.58e-09 | 76 |
smooth muscle cell | 1.98e-09 | 43 |
smooth muscle myoblast | 1.98e-09 | 43 |
mesodermal cell | 3.63e-08 | 121 |
vascular associated smooth muscle cell | 3.17e-07 | 32 |
neuronal stem cell | 3.22e-07 | 8 |
mesenchymal stem cell of adipose | 7.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.33e-07 | 14 |