FFCP PHASE1:Hg19::chr20:57466461..57466482,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000306090_5end | |||
|cluster_id=chr20:57466461..57466482,+ | |||
|description=CAGE_peak_1_at_GNAS_5end | |||
|id=chr20:57466461..57466482,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.03e-11!246;CL:0000222!5.42e-11!119;CL:0002321!9.79e-11!248;CL:0000055!6.16e-09!180;CL:0000183!3.98e-08!59;CL:0000066!5.01e-08!254;CL:1000449!3.59e-07!16;CL:0000680!7.53e-07!57;CL:0000056!7.53e-07!57;CL:0000355!7.53e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.25e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.00e-11,121;CL:0002321,6.88e-11,250;CL:0000066,5.39e-08,253;CL:1000449,2.23e-07,15;CL:0000680,7.66e-07,58;CL:0000056,7.66e-07,58;CL:0000355,7.66e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.02e-22!312;UBERON:0000475!4.78e-22!365;UBERON:0000483!6.99e-22!309;UBERON:0000481!1.23e-18!347;UBERON:0000468!1.72e-16!659;UBERON:0000477!1.76e-15!286;UBERON:0000064!5.61e-14!219;UBERON:0002100!2.41e-13!216;UBERON:0004111!2.41e-13!241;UBERON:0000480!3.78e-13!626;UBERON:0000025!4.62e-13!194;UBERON:0000467!6.64e-13!625;UBERON:0003104!2.70e-12!238;UBERON:0009142!2.70e-12!238;UBERON:0003914!5.26e-12!118;UBERON:0005256!6.82e-12!143;UBERON:0002050!2.18e-11!605;UBERON:0005423!2.18e-11!605;UBERON:0000923!3.21e-11!604;UBERON:0005291!3.21e-11!604;UBERON:0006598!3.21e-11!604;UBERON:0002532!3.21e-11!604;UBERON:0000922!6.59e-11!612;UBERON:0004872!1.72e-10!84;UBERON:0002049!1.27e-09!79;UBERON:0007798!1.27e-09!79;UBERON:0000490!1.39e-09!138;UBERON:0003103!2.45e-09!69;UBERON:0000914!2.55e-09!83;UBERON:0002329!2.55e-09!83;UBERON:0003077!2.55e-09!83;UBERON:0003059!2.55e-09!83;UBERON:0007282!2.55e-09!83;UBERON:0009618!2.55e-09!83;UBERON:0007285!2.55e-09!83;UBERON:0001009!4.34e-09!113;UBERON:0000055!5.67e-09!69;UBERON:0009569!6.17e-09!113;UBERON:0001981!1.16e-08!60;UBERON:0007500!1.16e-08!60;UBERON:0004537!1.16e-08!60;UBERON:0006965!1.16e-08!60;UBERON:0004290!1.42e-08!70;UBERON:0004535!1.64e-08!110;UBERON:0000486!2.03e-08!82;UBERON:0001134!2.37e-08!61;UBERON:0002036!2.37e-08!61;UBERON:0003082!2.37e-08!61;UBERON:0002385!1.20e-07!63;UBERON:0001015!1.20e-07!63;UBERON:0000383!1.20e-07!63;UBERON:0000924!1.23e-07!173;UBERON:0006601!1.23e-07!173;UBERON:0004121!2.96e-07!169;UBERON:0000063!3.39e-07!97;UBERON:0004211!3.59e-07!16;UBERON:0001285!3.59e-07!16;UBERON:0007684!3.59e-07!16;UBERON:0003220!3.59e-07!16;UBERON:0004208!3.59e-07!16;UBERON:0006555!5.34e-07!17;UBERON:0005103!5.34e-07!17;UBERON:0000083!5.34e-07!17;UBERON:0009201!5.34e-07!17;UBERON:0004819!5.34e-07!17;UBERON:0006553!5.34e-07!17;UBERON:0003074!5.34e-07!17;UBERON:0003060!5.34e-07!17;UBERON:0000353!7.26e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.25e-07;15!UBERON:0004819;2.25e-07;15!UBERON:0001285;2.25e-07;15!UBERON:0007684;2.25e-07;15!UBERON:0000353;7.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.16e-23,309;UBERON:0000483,1.11e-22,306;UBERON:0004111,1.81e-13,240;UBERON:0000025,7.55e-13,192;UBERON:0003914,5.31e-12,117;UBERON:0002100,1.29e-11,199;UBERON:0005423,4.55e-11,581;UBERON:0007503,6.86e-11,78;UBERON:0003104,2.16e-10,160;UBERON:0009142,2.16e-10,160;UBERON:0004872,2.73e-10,83;UBERON:0000490,4.99e-10,148;UBERON:0000922,9.08e-10,592;UBERON:0002050,1.77e-09,564;UBERON:0002049,2.00e-09,78;UBERON:0007798,2.00e-09,78;UBERON:0003103,2.36e-09,68;UBERON:0010314,4.26e-09,132;UBERON:0007524,6.25e-09,73;UBERON:0001009,6.59e-09,112;UBERON:0000923,6.79e-09,560;UBERON:0010316,6.79e-09,560;UBERON:0005291,6.79e-09,560;UBERON:0006598,6.79e-09,560;UBERON:0010317,6.79e-09,560;UBERON:0002532,6.79e-09,560;UBERON:0005256,8.46e-09,122;UBERON:0000055,8.92e-09,68;UBERON:0009569,1.13e-08,112;UBERON:0002329,1.44e-08,71;UBERON:0003059,1.44e-08,71;UBERON:0007282,1.44e-08,71;UBERON:0004290,1.44e-08,71;UBERON:0009618,1.44e-08,71;UBERON:0003077,1.53e-08,72;UBERON:0007285,1.53e-08,72;UBERON:0007500,1.83e-08,59;UBERON:0001981,1.83e-08,59;UBERON:0004537,1.83e-08,59;UBERON:0006965,1.83e-08,59;UBERON:0000486,2.03e-08,83;UBERON:0001134,2.46e-08,62;UBERON:0002036,2.46e-08,62;UBERON:0003082,2.46e-08,62;UBERON:0004535,2.46e-08,109;UBERON:0004121,7.32e-08,171;UBERON:0000924,7.32e-08,171;UBERON:0006601,7.32e-08,171;UBERON:0010371,1.21e-07,104;UBERON:0002385,1.22e-07,64;UBERON:0001015,1.22e-07,64;UBERON:0000383,1.22e-07,64;UBERON:0004211,2.23e-07,15;UBERON:0009773,2.23e-07,15;UBERON:0001231,2.23e-07,15;UBERON:0001285,2.23e-07,15;UBERON:0007684,2.23e-07,15;UBERON:0004208,2.23e-07,15;UBERON:0006555,3.52e-07,16;UBERON:0004819,3.52e-07,16;UBERON:0000353,7.34e-07,15 | |||
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7 | |||
|short_description=p1@GNAS | |||
}} |
Latest revision as of 06:17, 17 September 2015
Short description: | p1@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306090_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.00e-11 | 121 |
embryonic cell | 6.88e-11 | 250 |
epithelial cell | 5.39e-08 | 253 |
epithelial cell of nephron | 2.23e-07 | 15 |
muscle precursor cell | 7.66e-07 | 58 |
myoblast | 7.66e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.66e-07 | 58 |