FFCP PHASE1:Hg19::chr21:38739047..38739108,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3091 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-127bp_to_ENST00000462274_5end | |||
|cluster_id=chr21:38739047..38739108,+ | |||
|description=CAGE_peak_1_at_DYRK1A_5end | |||
|id=chr21:38739047..38739108,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.21e-15!140;CL:0002031!5.84e-14!124;CL:0002087!7.04e-13!119;CL:0000037!3.10e-12!172;CL:0000566!3.10e-12!172;CL:0000766!5.40e-12!76;CL:0002032!9.57e-12!165;CL:0000837!9.57e-12!165;CL:0002057!3.82e-11!42;CL:0000860!4.68e-11!45;CL:0000839!1.07e-10!70;CL:0000988!2.44e-10!182;CL:0000557!1.06e-09!71;CL:0002194!5.65e-09!63;CL:0000576!5.65e-09!63;CL:0000040!5.65e-09!63;CL:0000559!5.65e-09!63;CL:0002009!9.48e-09!65;CL:0000763!4.90e-08!112;CL:0000049!4.90e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.19e-11;33!CL:0002057;7.19e-11;33!CL:0000473;4.00e-08;39!CL:0000234;4.00e-08;39!CL:0000576;4.93e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.31e-15,136;CL:0002031,3.35e-14,120;CL:0002087,4.15e-13,115;CL:0000766,2.17e-12,72;CL:0000037,2.40e-12,168;CL:0002032,7.37e-12,161;CL:0000837,7.37e-12,161;CL:0000860,3.82e-11,42;CL:0002057,3.82e-11,42;CL:0000839,4.47e-11,66;CL:0000988,8.48e-11,177;CL:0000557,4.97e-10,67;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0002194,2.56e-09,59;CL:0000576,2.56e-09,59;CL:0000040,2.56e-09,59;CL:0000559,2.56e-09,59;CL:0002009,4.55e-09,61;CL:0000763,3.66e-08,108;CL:0000049,3.66e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-08;42!UBERON:0006601;5.55e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-38!115;UBERON:0001049!7.76e-15!57;UBERON:0005068!7.76e-15!57;UBERON:0006241!7.76e-15!57;UBERON:0007135!7.76e-15!57;UBERON:0000073!5.68e-13!94;UBERON:0001016!5.68e-13!94;UBERON:0001017!7.78e-13!82;UBERON:0003080!1.17e-12!42;UBERON:0005743!1.20e-12!86;UBERON:0000955!3.08e-12!69;UBERON:0006238!3.08e-12!69;UBERON:0002780!3.91e-12!41;UBERON:0001890!3.91e-12!41;UBERON:0006240!3.91e-12!41;UBERON:0002390!1.01e-11!102;UBERON:0003061!1.01e-11!102;UBERON:0002616!8.66e-11!59;UBERON:0001893!3.36e-10!34;UBERON:0002791!6.30e-10!33;UBERON:0002020!7.50e-10!34;UBERON:0003528!7.50e-10!34;UBERON:0002346!8.32e-10!90;UBERON:0001869!8.83e-10!32;UBERON:0002193!9.08e-10!112;UBERON:0003075!4.39e-09!86;UBERON:0007284!4.39e-09!86;UBERON:0002619!4.44e-09!22;UBERON:0000956!1.21e-08!25;UBERON:0000203!1.21e-08!25;UBERON:0001950!1.55e-08!20;UBERON:0003056!3.65e-07!61;UBERON:0001474!4.35e-07!86;UBERON:0002371!5.83e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.75e-10;114!UBERON:0002780;3.93e-09;41!UBERON:0001890;3.93e-09;41!UBERON:0002619;4.23e-09;22!UBERON:0001869;5.23e-09;32!UBERON:0001893;7.00e-09;34!UBERON:0002791;7.36e-09;32!UBERON:0000956;9.93e-09;25!UBERON:0000203;9.93e-09;25!UBERON:0003528;1.46e-08;34!UBERON:0002020;1.46e-08;34!UBERON:0001950;1.56e-08;20!UBERON:0000922;2.40e-08;49!UBERON:0000073;5.16e-08;53!UBERON:0002616;5.16e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.99e-38,114;UBERON:0001049,2.55e-14,56;UBERON:0005068,2.55e-14,56;UBERON:0006241,2.55e-14,56;UBERON:0007135,2.55e-14,56;UBERON:0000073,3.14e-13,53;UBERON:0002616,3.14e-13,53;UBERON:0001016,1.08e-12,89;UBERON:0001017,2.18e-12,81;UBERON:0002780,3.91e-12,41;UBERON:0001890,3.91e-12,41;UBERON:0003080,3.91e-12,41;UBERON:0006240,3.91e-12,41;UBERON:0002390,5.62e-12,98;UBERON:0003061,5.62e-12,98;UBERON:0000955,8.86e-12,68;UBERON:0006238,8.86e-12,68;UBERON:0001893,3.36e-10,34;UBERON:0002193,6.25e-10,108;UBERON:0003528,7.50e-10,34;UBERON:0002020,7.50e-10,34;UBERON:0001869,8.83e-10,32;UBERON:0002791,1.12e-09,32;UBERON:0002346,4.00e-09,86;UBERON:0002619,4.44e-09,22;UBERON:0000956,1.21e-08,25;UBERON:0000203,1.21e-08,25;UBERON:0001950,1.55e-08,20;UBERON:0003075,2.05e-08,82;UBERON:0007284,2.05e-08,82;UBERON:0001474,3.03e-07,82;UBERON:0002371,3.94e-07,76;UBERON:0003056,5.11e-07,61 | |||
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| |||
|short_description=p1@DYRK1A | |||
}} |
Latest revision as of 08:34, 18 September 2015
Short description: | p1@DYRK1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DYRK1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -127bp_to_ENST00000462274_5end |
EntrezGene: | DYRK1A |
HGNC: | 3091 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.31e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.35e-14 | 120 |
nongranular leukocyte | 4.15e-13 | 115 |
myeloid leukocyte | 2.17e-12 | 72 |
hematopoietic stem cell | 2.40e-12 | 168 |
hematopoietic oligopotent progenitor cell | 7.37e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.37e-12 | 161 |
classical monocyte | 3.82e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.82e-11 | 42 |
myeloid lineage restricted progenitor cell | 4.47e-11 | 66 |
hematopoietic cell | 8.48e-11 | 177 |
granulocyte monocyte progenitor cell | 4.97e-10 | 67 |
defensive cell | 1.17e-09 | 48 |
phagocyte | 1.17e-09 | 48 |
monopoietic cell | 2.56e-09 | 59 |
monocyte | 2.56e-09 | 59 |
monoblast | 2.56e-09 | 59 |
promonocyte | 2.56e-09 | 59 |
macrophage dendritic cell progenitor | 4.55e-09 | 61 |
myeloid cell | 3.66e-08 | 108 |
common myeloid progenitor | 3.66e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.99e-38 | 114 |
neural tube | 2.55e-14 | 56 |
neural rod | 2.55e-14 | 56 |
future spinal cord | 2.55e-14 | 56 |
neural keel | 2.55e-14 | 56 |
regional part of nervous system | 3.14e-13 | 53 |
regional part of brain | 3.14e-13 | 53 |
nervous system | 1.08e-12 | 89 |
central nervous system | 2.18e-12 | 81 |
regional part of forebrain | 3.91e-12 | 41 |
forebrain | 3.91e-12 | 41 |
anterior neural tube | 3.91e-12 | 41 |
future forebrain | 3.91e-12 | 41 |
hematopoietic system | 5.62e-12 | 98 |
blood island | 5.62e-12 | 98 |
brain | 8.86e-12 | 68 |
future brain | 8.86e-12 | 68 |
telencephalon | 3.36e-10 | 34 |
hemolymphoid system | 6.25e-10 | 108 |
brain grey matter | 7.50e-10 | 34 |
gray matter | 7.50e-10 | 34 |
cerebral hemisphere | 8.83e-10 | 32 |
regional part of telencephalon | 1.12e-09 | 32 |
neurectoderm | 4.00e-09 | 86 |
regional part of cerebral cortex | 4.44e-09 | 22 |
cerebral cortex | 1.21e-08 | 25 |
pallium | 1.21e-08 | 25 |
neocortex | 1.55e-08 | 20 |
neural plate | 2.05e-08 | 82 |
presumptive neural plate | 2.05e-08 | 82 |
bone element | 3.03e-07 | 82 |
bone marrow | 3.94e-07 | 76 |
pre-chordal neural plate | 5.11e-07 | 61 |