FFCP PHASE1:Hg19::chr2:224463819..224463838,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:224463819..224463838,- | |||
|coexpression_cluster_id=C708 | |||
|description=CAGE_peak_at_chr2:224463819..224463838,- | |||
|id=chr2:224463819..224463838,- | |||
|ontology_enrichment_celltype=CL:0002564!9.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.42e-13;1!CL:0000164;1.42e-13;1!CL:0000502;1.42e-13;1!CL:0000172;1.42e-13;1!CL:0002553;1.42e-13;1!CL:0000173;1.42e-13;1!CL:0000047;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.73e-14,1;CL:0000164,9.73e-14,1;CL:0000502,9.73e-14,1;CL:0000172,9.73e-14,1;CL:0000173,9.73e-14,1;CL:0002351,9.73e-14,1;CL:0002553,1.42e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.70e-26;2!CL:0002351;1.42e-13;1 | |||
|ontology_enrichment_disease=DOID:171!4.93e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:5662;7.08e-14;1!DOID:4430;1.42e-13;1!DOID:171;7.13e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,7.55e-14,1;DOID:4430,9.73e-14,1;DOID:171,6.74e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.04e-30!57;UBERON:0005068!5.04e-30!57;UBERON:0006241!5.04e-30!57;UBERON:0007135!5.04e-30!57;UBERON:0002346!4.68e-29!90;UBERON:0001017!4.67e-27!82;UBERON:0003075!2.46e-25!86;UBERON:0007284!2.46e-25!86;UBERON:0005743!2.57e-25!86;UBERON:0000073!6.34e-25!94;UBERON:0001016!6.34e-25!94;UBERON:0002616!1.01e-24!59;UBERON:0000955!9.83e-23!69;UBERON:0006238!9.83e-23!69;UBERON:0002780!1.39e-21!41;UBERON:0001890!1.39e-21!41;UBERON:0006240!1.39e-21!41;UBERON:0003080!6.37e-21!42;UBERON:0003056!5.29e-18!61;UBERON:0007023!1.42e-16!115;UBERON:0000924!3.09e-16!173;UBERON:0006601!3.09e-16!173;UBERON:0002020!8.35e-16!34;UBERON:0003528!8.35e-16!34;UBERON:0000033!2.48e-15!123;UBERON:0001869!7.66e-15!32;UBERON:0000153!3.79e-14!129;UBERON:0007811!3.79e-14!129;UBERON:0004121!7.23e-14!169;UBERON:0001893!9.94e-14!34;UBERON:0002619!1.31e-12!22;UBERON:0002791!1.99e-12!33;UBERON:0001950!7.04e-12!20;UBERON:0001894!2.69e-11!7;UBERON:0006222!2.69e-11!7;UBERON:0000956!8.71e-11!25;UBERON:0000203!8.71e-11!25;UBERON:0003076!2.80e-10!15;UBERON:0003057!2.80e-10!15;UBERON:0005383!3.11e-08!3;UBERON:0005382!3.11e-08!3;UBERON:0004733!3.93e-08!12;UBERON:0002028!3.93e-08!12;UBERON:0007277!3.93e-08!12;UBERON:0000988!9.91e-08!3;UBERON:0000025!1.00e-07!194;UBERON:0004732!2.05e-07!13;UBERON:0002021!2.86e-07!5;UBERON:0002298!8.38e-07!8;UBERON:0002242!9.20e-07!3;UBERON:0003068!9.20e-07!3;UBERON:0002328!9.20e-07!3;UBERON:0004880!9.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;1.58e-37;3!UBERON:0005382;1.58e-37;3!UBERON:0000369;2.40e-28;4!UBERON:0002435;2.40e-28;4!UBERON:0000204;2.40e-28;4!UBERON:0001873;8.70e-26;2!UBERON:0000125;2.76e-22;9!UBERON:0002308;2.76e-22;9!UBERON:0009663;1.68e-16;7!UBERON:0002346;1.22e-13;4!UBERON:0000923;1.22e-13;4!UBERON:0010316;1.22e-13;4!UBERON:0005291;1.22e-13;4!UBERON:0001874;1.42e-13;1!UBERON:0002420;5.64e-13;9!UBERON:0007245;5.64e-13;9!UBERON:0010009;5.64e-13;9!UBERON:0010011;5.64e-13;9!UBERON:0000454;5.64e-13;9!UBERON:0002050;4.22e-11;5!UBERON:0005423;4.22e-11;5!UBERON:0003528;2.95e-10;34!UBERON:0002020;2.95e-10;34!UBERON:0002791;1.40e-09;32!UBERON:0001869;6.71e-09;32!UBERON:0001893;1.51e-08;34!UBERON:0000007;1.05e-07;2!UBERON:0002148;1.40e-07;2!UBERON:0006331;1.40e-07;2!UBERON:0009662;1.40e-07;2!UBERON:0002771;1.99e-07;2!UBERON:0002780;4.57e-07;41!UBERON:0001890;4.57e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.08e-37,3;UBERON:0005382,1.08e-37,3;UBERON:0000369,1.81e-28,4;UBERON:0002435,1.81e-28,4;UBERON:0000204,1.81e-28,4;UBERON:0010082,1.81e-28,4;UBERON:0001873,7.67e-26,2;UBERON:0010122,7.67e-26,2;UBERON:0000125,2.15e-22,9;UBERON:0002308,2.15e-22,9;UBERON:0009663,1.43e-16,7;UBERON:0001874,1.10e-13,1;UBERON:0002346,4.22e-13,86;UBERON:0002420,4.99e-13,9;UBERON:0007245,4.99e-13,9;UBERON:0010009,4.99e-13,9;UBERON:0010011,4.99e-13,9;UBERON:0000454,4.99e-13,9;UBERON:0003528,1.92e-12,34;UBERON:0002020,1.92e-12,34;UBERON:0000073,1.00e-10,53;UBERON:0002616,1.00e-10,53;UBERON:0002780,2.45e-10,41;UBERON:0001890,2.45e-10,41;UBERON:0003080,2.45e-10,41;UBERON:0006240,2.45e-10,41;UBERON:0001049,3.96e-10,56;UBERON:0005068,3.96e-10,56;UBERON:0006241,3.96e-10,56;UBERON:0007135,3.96e-10,56;UBERON:0002791,2.47e-09,32;UBERON:0001869,2.47e-09,32;UBERON:0003056,3.27e-09,61;UBERON:0001893,8.54e-09,34;UBERON:0001017,9.25e-09,81;UBERON:0003075,9.35e-09,82;UBERON:0007284,9.35e-09,82;UBERON:0000955,3.91e-08,68;UBERON:0006238,3.91e-08,68;UBERON:0001016,8.06e-08,89;UBERON:0000007,1.05e-07,2;UBERON:0002148,1.28e-07,2;UBERON:0006331,1.28e-07,2;UBERON:0009662,1.28e-07,2;UBERON:0002771,2.40e-07,2;UBERON:0004121,3.02e-07,171;UBERON:0000924,3.02e-07,171;UBERON:0006601,3.02e-07,171;UBERON:0010371,9.67e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,1.77148277162768,3.25610384288601,0,0.442317039724898,0.295547618953547,0.658156191461918,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,4.63306494227304,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0,0,0.775697738169303,2.51241943311111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0,0,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0.218419276384028,0,2.12574920101683,0.991486114072017,0,0,0,1.60114149657094,0,0,0,0,0.638535436228605,2.2562800066483,0.252071696221718,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.472763092328763,0,0.826747186004736,0.126831620387814,0,0,0,7.03484977438482,0,0.535701835878287,0,6.06965604236632,0.682986574053893,0,0,2.22934412268644,0.339848664884159,0.0657727735628491,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0,0,0.301925687133347,0.0771741581079447,0.655678681511872,12.2282497053996,0,1.88541237681301,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:224463819..224463838,- | |||
}} |
Latest revision as of 07:08, 29 July 2015
Short description: | p@chr2:224463819..224463838, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:224463819..224463838, - |
Coexpression cluster: | C708_smallcell_peripheral_gastrointestinal_neuroectodermal_Neurons_pituitary_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.73e-14 | 1 |
enteroendocrine cell | 9.73e-14 | 1 |
type D enteroendocrine cell | 9.73e-14 | 1 |
somatostatin secreting cell | 9.73e-14 | 1 |
pancreatic D cell | 9.73e-14 | 1 |
progenitor cell of endocrine pancreas | 9.73e-14 | 1 |
lung fibroblast | 1.42e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 7.55e-14 | 1 |
somatostatinoma | 9.73e-14 | 1 |
neuroectodermal tumor | 6.74e-12 | 10 |