FFCP PHASE1:Hg19::chr2:2336983..2336994,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:2336983..2336994,- | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_at_chr2:2336983..2336994,- | |||
|id=chr2:2336983..2336994,- | |||
|ontology_enrichment_celltype=CL:0000242!1.15e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.29e-76!32;UBERON:0001893!1.65e-71!34;UBERON:0002020!2.55e-71!34;UBERON:0003528!2.55e-71!34;UBERON:0001049!2.86e-69!57;UBERON:0005068!2.86e-69!57;UBERON:0006241!2.86e-69!57;UBERON:0007135!2.86e-69!57;UBERON:0002780!6.90e-69!41;UBERON:0001890!6.90e-69!41;UBERON:0006240!6.90e-69!41;UBERON:0002791!1.20e-67!33;UBERON:0003080!3.91e-67!42;UBERON:0002616!1.03e-66!59;UBERON:0002619!5.07e-64!22;UBERON:0000955!7.38e-59!69;UBERON:0006238!7.38e-59!69;UBERON:0001017!7.39e-59!82;UBERON:0000073!2.50e-56!94;UBERON:0001016!2.50e-56!94;UBERON:0000956!4.24e-56!25;UBERON:0000203!4.24e-56!25;UBERON:0001950!7.09e-56!20;UBERON:0005743!8.05e-56!86;UBERON:0003075!4.92e-50!86;UBERON:0007284!4.92e-50!86;UBERON:0002346!1.70e-47!90;UBERON:0003056!1.43e-44!61;UBERON:0004121!5.94e-34!169;UBERON:0007023!2.93e-33!115;UBERON:0000924!5.49e-33!173;UBERON:0006601!5.49e-33!173;UBERON:0000033!2.48e-32!123;UBERON:0000153!1.69e-30!129;UBERON:0007811!1.69e-30!129;UBERON:0000200!6.06e-26!6;UBERON:0001871!5.96e-19!7;UBERON:0000025!4.94e-18!194;UBERON:0000369!2.38e-17!4;UBERON:0002435!2.38e-17!4;UBERON:0000204!2.38e-17!4;UBERON:0010082!2.38e-17!4;UBERON:0002308!2.22e-16!9;UBERON:0000125!2.22e-16!9;UBERON:0002420!2.93e-16!9;UBERON:0007245!2.93e-16!9;UBERON:0010009!2.93e-16!9;UBERON:0010011!2.93e-16!9;UBERON:0000454!2.93e-16!9;UBERON:0009663!6.22e-15!7;UBERON:0001872!6.70e-15!5;UBERON:0000349!6.35e-14!5;UBERON:0005383!9.89e-14!3;UBERON:0005382!9.89e-14!3;UBERON:0002021!1.29e-13!5;UBERON:0002771!2.34e-13!3;UBERON:0004111!4.78e-13!241;UBERON:0000064!7.63e-13!219;UBERON:0000483!4.85e-11!309;UBERON:0000119!7.40e-11!312;UBERON:0000477!1.08e-10!286;UBERON:0001954!4.54e-10!2;UBERON:0003022!4.54e-10!2;UBERON:0002421!4.54e-10!2;UBERON:0002600!4.54e-10!2;UBERON:0001873!5.19e-10!2;UBERON:0010122!5.19e-10!2;UBERON:0001870!8.08e-10!2;UBERON:0004733!7.70e-09!12;UBERON:0002028!7.70e-09!12;UBERON:0007277!7.70e-09!12;UBERON:0004732!3.89e-08!13;UBERON:0002680!4.83e-08!9;UBERON:0001895!4.83e-08!9;UBERON:0010092!4.83e-08!9;UBERON:0000475!4.97e-08!365;UBERON:0003076!5.20e-07!15;UBERON:0003057!5.20e-07!15;UBERON:0000481!8.40e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.69e-21;2!UBERON:0002114;1.83e-14;2!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0000073;5.01e-11;53!UBERON:0002616;5.01e-11;53!UBERON:0001872;2.74e-09;5!UBERON:0002108;3.22e-09;4!UBERON:0000922;3.38e-09;49!UBERON:0002780;4.32e-09;41!UBERON:0001890;4.32e-09;41!UBERON:0001017;5.70e-09;75!UBERON:0001950;1.42e-08;20!UBERON:0002037;5.54e-08;6!UBERON:0002619;6.52e-08;22!UBERON:0000956;4.15e-07;25!UBERON:0000203;4.15e-07;25!UBERON:0001871;6.04e-07;6!UBERON:0001894;6.04e-07;7!UBERON:0001016;6.13e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.70e-21,2;UBERON:0002114,2.09e-14,2;UBERON:0000073,1.93e-12,53;UBERON:0002616,1.93e-12,53;UBERON:0001049,7.99e-12,56;UBERON:0005068,7.99e-12,56;UBERON:0006241,7.99e-12,56;UBERON:0007135,7.99e-12,56;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0002780,2.66e-09,41;UBERON:0001890,2.66e-09,41;UBERON:0003080,2.66e-09,41;UBERON:0006240,2.66e-09,41;UBERON:0001872,2.74e-09,5;UBERON:0002108,3.49e-09,4;UBERON:0001950,1.37e-08,20;UBERON:0001017,2.54e-08,81;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002037,5.54e-08,6;UBERON:0006215,5.54e-08,6;UBERON:0002346,5.76e-08,86;UBERON:0002619,6.29e-08,22;UBERON:0001016,1.45e-07,89;UBERON:0000956,4.02e-07,25;UBERON:0000203,4.02e-07,25;UBERON:0001871,5.70e-07,6;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
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|short_description=p@chr2:2336983..2336994,- | |||
}} |
Latest revision as of 07:49, 29 July 2015
Short description: | p@chr2:2336983..2336994, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:2336983..2336994, - |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.70e-21 | 2 |
duodenum | 2.09e-14 | 2 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
regional part of forebrain | 2.66e-09 | 41 |
forebrain | 2.66e-09 | 41 |
anterior neural tube | 2.66e-09 | 41 |
future forebrain | 2.66e-09 | 41 |
parietal lobe | 2.74e-09 | 5 |
small intestine | 3.49e-09 | 4 |
neocortex | 1.37e-08 | 20 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
cerebellum | 5.54e-08 | 6 |
rhombic lip | 5.54e-08 | 6 |
neurectoderm | 5.76e-08 | 86 |
regional part of cerebral cortex | 6.29e-08 | 22 |
nervous system | 1.45e-07 | 89 |
cerebral cortex | 4.02e-07 | 25 |
pallium | 4.02e-07 | 25 |
temporal lobe | 5.70e-07 | 6 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |