FFCP PHASE1:Hg19::chr2:64751685..64751698,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54812 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25951 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000498706_5end | |||
|cluster_id=chr2:64751685..64751698,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_AFTPH_5end | |||
|id=chr2:64751685..64751698,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.84e-58!140;CL:0000037!2.49e-55!172;CL:0000566!2.49e-55!172;CL:0000988!1.03e-53!182;CL:0002032!3.23e-53!165;CL:0000837!3.23e-53!165;CL:0002031!2.53e-47!124;CL:0002087!1.69e-45!119;CL:0000766!7.75e-39!76;CL:0000763!2.29e-37!112;CL:0000049!2.29e-37!112;CL:0000557!3.36e-34!71;CL:0000839!1.36e-32!70;CL:0002009!5.38e-32!65;CL:0002194!1.61e-30!63;CL:0000576!1.61e-30!63;CL:0000040!1.61e-30!63;CL:0000559!1.61e-30!63;CL:0002057!5.45e-27!42;CL:0000860!9.81e-25!45;CL:0000542!1.39e-13!53;CL:0000051!1.39e-13!53;CL:0000838!4.00e-13!52;CL:0000134!1.00e-10!358;CL:0000945!1.19e-10!24;CL:0000826!1.19e-10!24;CL:0002320!9.99e-10!365;CL:0000451!6.80e-08!10;CL:0000236!7.28e-08!14;CL:0000990!2.12e-07!8;CL:0000219!6.16e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.01e-46;33!CL:0002057;2.01e-46;33!CL:0000473;2.95e-43;39!CL:0000234;2.95e-43;39!CL:0000576;1.84e-38;48!CL:0000766;4.80e-34;69!CL:0000738;6.01e-21;136!CL:0000763;1.17e-17;100!CL:0002087;1.92e-15;104!CL:0000990;9.40e-15;8!CL:0000451;3.97e-14;10!CL:0000945;8.55e-13;24!CL:0000988;1.34e-12;177!CL:0000840;4.83e-11;5!CL:0000236;1.44e-10;13!CL:0000094;1.46e-10;8!CL:0000219;1.64e-09;193!CL:0000081;2.14e-09;11!CL:0000453;1.52e-08;5!CL:0000097;2.27e-08;5!CL:0000235;5.93e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.94e-88,136;CL:0000766,1.84e-86,72;CL:0000557,2.30e-78,67;CL:0000839,1.74e-73,66;CL:0000988,3.42e-73,177;CL:0000037,4.73e-73,168;CL:0002009,2.46e-72,61;CL:0002032,6.33e-72,161;CL:0000837,6.33e-72,161;CL:0002031,2.22e-70,120;CL:0002194,6.69e-69,59;CL:0000576,6.69e-69,59;CL:0000040,6.69e-69,59;CL:0000559,6.69e-69,59;CL:0000763,1.77e-68,108;CL:0000049,1.77e-68,108;CL:0000473,1.50e-66,48;CL:0000234,1.50e-66,48;CL:0002087,8.78e-65,115;CL:0000860,5.47e-61,42;CL:0002057,5.47e-61,42;CL:0000134,1.58e-22,354;CL:0002320,1.44e-21,361;CL:0000219,3.33e-18,386;CL:0000990,6.92e-15,8;CL:0000451,2.26e-14,10;CL:0000048,3.84e-14,427;CL:0000723,1.37e-13,433;CL:0000945,4.89e-13,24;CL:0000826,4.89e-13,24;CL:0000034,7.09e-13,441;CL:0000840,2.97e-11,5;CL:0001029,2.97e-11,5;CL:0002393,1.21e-10,9;CL:0002397,1.21e-10,9;CL:0000094,1.35e-10,8;CL:0000236,8.13e-10,14;CL:0000081,1.99e-09,11;CL:0000453,1.42e-08,5;CL:0000097,1.64e-08,5;CL:0002028,1.64e-08,5;CL:0000542,2.77e-07,53;CL:0000051,2.77e-07,53;CL:0000235,5.52e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-43;42!CL:0000049;4.86e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.90e-39!102;UBERON:0003061!4.90e-39!102;UBERON:0002193!1.57e-35!112;UBERON:0002371!1.64e-29!80;UBERON:0001474!2.38e-25!86;UBERON:0004765!1.12e-20!101;UBERON:0001434!1.12e-20!101;UBERON:0002405!5.70e-20!115;UBERON:0007023!4.15e-09!115;UBERON:0002384!1.93e-08!375;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15;UBERON:0003081!7.10e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-14;15!UBERON:0000179;1.71e-14;15!UBERON:0000463;1.71e-14;15!UBERON:0002390;3.99e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.70e-84,98;UBERON:0003061,7.70e-84,98;UBERON:0002193,4.22e-78,108;UBERON:0002371,2.17e-69,76;UBERON:0002405,3.07e-63,93;UBERON:0001474,6.81e-63,82;UBERON:0004765,1.41e-55,90;UBERON:0001434,4.42e-48,100;UBERON:0003081,1.40e-29,203;UBERON:0002204,3.47e-22,167;UBERON:0002384,5.88e-21,371;UBERON:0000178,1.88e-14,15;UBERON:0000179,1.88e-14,15;UBERON:0000463,1.88e-14,15;UBERON:0000926,4.35e-13,315;UBERON:0004120,4.35e-13,315;UBERON:0006603,4.35e-13,315 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.14620108621927,0.985207073399349,1.57421562627358,0.393364276848904,1.15148819429164,1.70297735647684,0,0,0,0.542270404062111,0,0.587200878669695,1.10799081706375,0,1.08505435357926,0.895661896959697,0.32389366601898,1.28787783817093,6.25212426752128,3.40088349319928,5.33684934613196,4.18372266430232,2.87817521615278,3.40677007984614,3.16461631554365,3.84241059793651,2.36482229888585,3.44745680736619,3.22742341791913,4.06279459783025,5.45902784673554,3.547779950752,3.59557575112135,3.06083892370903,3.20929027076094,1.91801137739712,1.9791078011203,1.79517291859469,3.83602275479425,3.77272010217159,2.26954089876456,3.11411124497787,1.7587406567972,3.65038042894141,3.47502151528187,4.84319602106695,3.68277635987565,4.74693581161327,3.59133986730301,2.55125159958052,1.25795187305026,3.36985893439485,3.00353785683013,3.37523732063868,3.13514018115373,5.37075028437543,4.01861138282195,1.75996244461323,2.18455444504853,3.55803701545422,1.70692089026603,3.2031678962881,2.87376219977242,3.96626923670917,2.86216126360609,1.1384259382189,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.786021525498329,0.411202997999018,1.67186495390678,0.651844533267181,0,0,0.891283655081389,0.294605907474837,0.221533894583621,1.35401931882508,0.896639238079726,0.910415432919148,0.657751618414705,0,0.579606171470105,0.296573126324121,0,1.04535523804977,0.339928028092699,1.14966148080576,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.451725357233318,0.255973222308837,0,0.710331756132051,0.821127996921047,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0.144846518960824,0.795285947051099,1.45990461090791,0,0.221729397462564,0.087834785693126,0.523916301990851,0,0,11.0346113842592,10.6219139752553,6.91381394698099,1.66943437013739,1.71598473234038,0.371457501329565,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0.535798369704479,0,0,0,0,0,14.495845917967,11.6334079244498,0,0,0,0.529636723252875,0,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0,0.674156540800822,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,1.47730203652438,10.2961876661265,2.67536092119711,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,27.0964780842769,1.93706554829097,3.10992173311158,1.44119953416961,2.27236380167484,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0.637938751653163,4.49404214368309,5.9832291840805,8.28831026872071,0,0,0.271265023699736,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0.173767228936166,0,0,1.03384013061444,2.15714200818617,0.853820462427555,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0.164254312027618,0,0,0.362578348774867,0.40101294060657,0.184161977871793,0,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.330569830721956,0.384380134730212,0.127612712494584,0,0,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,1.01489521846434,3.0585488285695,1.70894156152249,1.42939065274673,2.05681136543097,1.94541993357815,3.24018862342869,1.58625035258854,0,0,0,1.48642540100575,0.144269212976445,0.142283686696828,0.318852545457645,0,0.957526850661834,1.05836791361941,0,0.561594356226918,1.14117339516596,0.626719583092093,0,0.338583555603207,0.481764225311099,0.605399121573143,0.425846237690326,0.687010689511529,0.307240764308458,2.01308497103174,1.00109485027145,1.17232857241224,0.278406173895242,0,0.270455678475983,0.66614393599564,0,0,1.17206543417515,0,1.22587722705226,0,0,0,0,0,0.422008249231538,0.111308705022906,0.494411622680279,0.211125408127993,0.19924798825107,1.65770349318689,0,0,1.84627208191604,0,0.359473404589307,0,0,0.197286811273867,0,0,0,0.649376687132959,0,0,0.524759999977174,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0.557694977114413,0.307801034015188,0.113942055847001,0,0.269272933229316,0,0,0.0915975934018623,1.06606955203727,1.02193298195737,0.627921025580099,0.498635045700469,0,0,0,0.189753732724185,1.27149263184303,0,0.489698424477443,0.141353071433941,0,0,0.265372693510018,0,2.37216902944498,1.35920332841153,1.56632924258183,0.404406797884062,0,0.468528891450678,0.729819156862664,0,0,0.394584402849391,0,0,0.758238955541855,1.05226393590145,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0.520679215005393,0.391969589657511,0.261177619741208,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.387956065953678,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0.696418755514666,0.195551382734803,0.0801588202515337,0.640358984218058,0,0.576361668616424,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0.788662062837943,0.558564802544508,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0.0787831823072236,0.247247575143499,0,0,0.338693328263138,0,0.408610218334727,0,0.137539436597234,0,4.49947783103001,3.86900977278975,0.668245123238271,0,1.02447419488958,0.314727528809989,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0.326587360109409,0,0.574647645245373,0,0,0.293104467356165,0,0.129282956361551,0.39669780522807,0.171086837884329,0,0.854299300541557,0.471612915298998,0.828478110694391,1.48849806543585,0.988058159489721,2.55764456599881,1.27668251554036,0.544017803369474,0.2506898940227,0,0,0.157054096250234,1.77213635993397,0.976210119215705,0.250381861413,0,0.110929051536852,0.248385611765534,0,0.124980407962107,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0.489473409012935,0.179088841081487,0,0,0,0,0,0,0,0,0.553033744606923,2.14346339723327,1.19578356282027,2.61704630809351,0,0,0,1.79988656269437,0.426766918776564,2.2387947355906,0,0,0,0.622077260032973,0,0.323474434190045,0,0,0,0,0.247871528518004,0,0,0.23658523500376,0,0,0,0.578063025868136,0,0.957803154342908,0.205116364240755,0.252071696221718,0.276629009856872,0.161475645631851,0,0.785181748008205,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0.781514011233092,0.523813388962845,0,0,1.08060135389431,0.781078098613847,0,0.570742291745161,0,0,1.48863353516788,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0,0.0887023701626388,0.691403925334676,0,0.339848664884159,0.263091094251396,0.118193840883968,0.333694205676207,0.627944742804112,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0.51215543128185,0,0.860454717640555,0,0.340853619036631,0,0.4582137370881,0,0,0.223710863595585,0.098150233615243,1.09726132484042,0,0.307988420568741,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0.22589216407792,0.109940516745429,0,0.308696632431779,0.655678681511872,1.88126918544609,1.22574160876953,0,0.196308467114945,0.891139200981258,0,0,1.50374268767766,0.709036767709349,3.19811698959773,0,0.352894871715692,0.320965466756673,0,0,0.143339583151451,0.157771562193185,0.271965960763659,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.18378979906969,0,0.0757786982182394,0.535928260312357,0,0.413731983447581,0.213233981900981,0.23806443146374,0.645889098360061,0.682821857254437,0,0.12729431655633,0,0.653150243690884,0,1.0776328482334,0.860666464712116,0,0.244209805832924,0.533636729388577,0,0.179650404213174,0,0.366724332548599,0,1.33151354837103,0.603821380773079,1.28227396921293 | |||
|short_description=p4@AFTPH | |||
}} |
Latest revision as of 23:46, 17 September 2015
Short description: | p4@AFTPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AFTPH_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 24bp_to_ENST00000498706_5end |
EntrezGene: | AFTPH |
HGNC: | 25951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.70e-84 | 98 |
blood island | 7.70e-84 | 98 |
hemolymphoid system | 4.22e-78 | 108 |
bone marrow | 2.17e-69 | 76 |
immune system | 3.07e-63 | 93 |
bone element | 6.81e-63 | 82 |
skeletal element | 1.41e-55 | 90 |
skeletal system | 4.42e-48 | 100 |
lateral plate mesoderm | 1.40e-29 | 203 |
musculoskeletal system | 3.47e-22 | 167 |
connective tissue | 5.88e-21 | 371 |
blood | 1.88e-14 | 15 |
haemolymphatic fluid | 1.88e-14 | 15 |
organism substance | 1.88e-14 | 15 |
mesoderm | 4.35e-13 | 315 |
mesoderm-derived structure | 4.35e-13 | 315 |
presumptive mesoderm | 4.35e-13 | 315 |