FFCP PHASE1:Mm9::chr11:46250533..46250552,+: Difference between revisions
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{{FFCP|EntrezGene=66213|HGNC=|MCL_coexpression_id=210|UniProt=|association_with_transcript=26bp_to_ENSMUST00000156073_5end|description=CAGE_peak_4_at_Med7_5end|id=chr11:46250533..46250552,+|ontology_enrichment_celltype=CL:0000988!2.05e-11!32;CL:0002032!2.05e-11!32;CL:0000037!2.05e-11!32;CL:0000566!2.05e-11!32;CL:0000837!2.05e-11!32;CL:0002320!5.22e-10!46;CL:0000134!5.22e-10!46;CL:0000219!4.65e-09!54;CL:0002031!6.42e-08!25;CL:0000838!8.80e-08!12;CL:0000542!8.84e-08!13;CL:0000051!8.84e-08!13;CL:0000084!2.99e-07!11;CL:0000827!2.99e-07!11;CL:0000738!4.71e-07!17;CL:0002087!4.71e-07!17;CL:0000063!5.53e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,1.53e-19,32;CL:0002032,1.53e-19,32;CL:0000037,1.53e-19,32;CL:0000837,1.53e-19,32;CL:0002320,1.33e-17,46;CL:0000134,1.33e-17,46;CL:0000838,4.86e-17,12;CL:0000084,1.00e-15,11;CL:0000827,1.00e-15,11;CL:0000542,1.68e-15,13;CL:0000051,1.68e-15,13;CL:0000219,5.94e-14,54;CL:0000791,3.35e-13,9;CL:0000789,3.35e-13,9;CL:0002420,3.35e-13,9;CL:0002419,3.35e-13,9;CL:0000790,3.35e-13,9;CL:0002031,1.29e-12,25;CL:0000624,2.63e-12,8;CL:0000738,3.61e-11,17;CL:0002087,3.61e-11,17;CL:0000034,9.84e-11,97;CL:0000893,4.96e-09,6;CL:0002489,4.96e-09,6;CL:0000898,4.96e-09,6;CL:0000809,4.96e-09,6;CL:0000810,4.96e-09,6;CL:0000895,4.96e-09,6;CL:0000808,4.96e-09,6;CL:0000894,4.96e-09,6;CL:0000806,4.96e-09,6;CL:0000807,4.96e-09,6;CL:0000805,4.96e-09,6;CL:0002425,4.96e-09,6;CL:0002436,4.96e-09,6;CL:0002427,4.96e-09,6;CL:0002428,4.96e-09,6;CL:0002429,4.96e-09,6;CL:0002433,4.96e-09,6;CL:0002431,4.96e-09,6;CL:0002432,4.96e-09,6;CL:0000723,7.82e-09,91;CL:0000048,7.82e-09,91;CL:0000049,5.85e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.18e-14!70;UBERON:0002390!5.49e-13!45;UBERON:0003061!5.49e-13!45;UBERON:0002193!1.24e-12!48;UBERON:0002384!5.22e-10!46;UBERON:0005057!5.17e-09!51;UBERON:0000926!1.38e-08!193;UBERON:0004120!1.38e-08!193;UBERON:0006603!1.38e-08!193;UBERON:0004177!6.28e-08!29;UBERON:0003081!8.85e-08!88;UBERON:0000072!5.79e-07!27;UBERON:0003408!6.29e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.33e-17,46;UBERON:0002193,9.88e-13,48;UBERON:0002405,9.88e-13,48;UBERON:0002390,1.59e-12,45;UBERON:0003061,1.59e-12,45;UBERON:0004177,2.23e-08,29;UBERON:0005057,2.23e-08,29;UBERON:0000077,1.27e-07,35;UBERON:0002370,4.18e-07,23;UBERON:0000974,4.18e-07,23;UBERON:0004807,4.18e-07,23;UBERON:0005058,4.18e-07,23;UBERON:0003351,4.18e-07,23;UBERON:0009113,4.18e-07,23;UBERON:0003295,4.18e-07,23;UBERON:0009722,4.18e-07,23;UBERON:0005562,4.18e-07,23;UBERON:0007690,4.18e-07,23;UBERON:0000072,7.88e-07,27|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0,3.74457637980571,1.83025338797167,1.17032263160997,1.88339765048055,1.19658238493005,1.19840510951844,1.74840804837995,1.33243904726265,1.01237633694913,2.09868563438444,0.946386496074713,1.50825876966313,0.42438965179803,1.44573593256819,1.19149141441062,1.82839852397255,0,0.22940928106717,0.57423196411502,0.86152399231815,0,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0,0,3.76678467663217,2.3440060335714,2.09409497589519,3.52938892818609,2.04913645487534,2.42755176515577,0.125896817975577,0.405507724878058,0.367093504323363,0,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,1.51004345451963,2.17608642603403,1.00828139742739,0.771778308107841,0.286533439938757,0,0.404632921719196,0,1.26766280701236,0,0,0.899899717281399,0.988866362566974,1.4209602298922,0.299600110518405,0.768436610643109,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.377857800533928,11.0148505706638,0,1.3599426674155,1.07940638327563,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,0.865964164044856,1.52015919285059,0.505524445014783,0.22836775943812,1.8125651855302,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0.741584903203122,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,2.27648736561249,1.79970819298022,2.1601938602421,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0.497627882440372,1.0108910337347,0,0.130120442962704,0,0.540186389416048,0,0.340182495756639,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,2.1066395619397,1.80143534980301,1.42081749697796,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0.569003702859245,0.114248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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66213 | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENSMUST00000156073_5end | |||
|cluster_id=chr11:46250533..46250552,+ | |||
|description=CAGE_peak_4_at_Med7_5end | |||
|id=chr11:46250533..46250552,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.05e-11!32;CL:0002032!2.05e-11!32;CL:0000037!2.05e-11!32;CL:0000566!2.05e-11!32;CL:0000837!2.05e-11!32;CL:0002320!5.22e-10!46;CL:0000134!5.22e-10!46;CL:0000219!4.65e-09!54;CL:0002031!6.42e-08!25;CL:0000838!8.80e-08!12;CL:0000542!8.84e-08!13;CL:0000051!8.84e-08!13;CL:0000084!2.99e-07!11;CL:0000827!2.99e-07!11;CL:0000738!4.71e-07!17;CL:0002087!4.71e-07!17;CL:0000063!5.53e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.53e-19,32;CL:0002032,1.53e-19,32;CL:0000037,1.53e-19,32;CL:0000837,1.53e-19,32;CL:0002320,1.33e-17,46;CL:0000134,1.33e-17,46;CL:0000838,4.86e-17,12;CL:0000084,1.00e-15,11;CL:0000827,1.00e-15,11;CL:0000542,1.68e-15,13;CL:0000051,1.68e-15,13;CL:0000219,5.94e-14,54;CL:0000791,3.35e-13,9;CL:0000789,3.35e-13,9;CL:0002420,3.35e-13,9;CL:0002419,3.35e-13,9;CL:0000790,3.35e-13,9;CL:0002031,1.29e-12,25;CL:0000624,2.63e-12,8;CL:0000738,3.61e-11,17;CL:0002087,3.61e-11,17;CL:0000034,9.84e-11,97;CL:0000893,4.96e-09,6;CL:0002489,4.96e-09,6;CL:0000898,4.96e-09,6;CL:0000809,4.96e-09,6;CL:0000810,4.96e-09,6;CL:0000895,4.96e-09,6;CL:0000808,4.96e-09,6;CL:0000894,4.96e-09,6;CL:0000806,4.96e-09,6;CL:0000807,4.96e-09,6;CL:0000805,4.96e-09,6;CL:0002425,4.96e-09,6;CL:0002436,4.96e-09,6;CL:0002427,4.96e-09,6;CL:0002428,4.96e-09,6;CL:0002429,4.96e-09,6;CL:0002433,4.96e-09,6;CL:0002431,4.96e-09,6;CL:0002432,4.96e-09,6;CL:0000723,7.82e-09,91;CL:0000048,7.82e-09,91;CL:0000049,5.85e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.18e-14!70;UBERON:0002390!5.49e-13!45;UBERON:0003061!5.49e-13!45;UBERON:0002193!1.24e-12!48;UBERON:0002384!5.22e-10!46;UBERON:0005057!5.17e-09!51;UBERON:0000926!1.38e-08!193;UBERON:0004120!1.38e-08!193;UBERON:0006603!1.38e-08!193;UBERON:0004177!6.28e-08!29;UBERON:0003081!8.85e-08!88;UBERON:0000072!5.79e-07!27;UBERON:0003408!6.29e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.33e-17,46;UBERON:0002193,9.88e-13,48;UBERON:0002405,9.88e-13,48;UBERON:0002390,1.59e-12,45;UBERON:0003061,1.59e-12,45;UBERON:0004177,2.23e-08,29;UBERON:0005057,2.23e-08,29;UBERON:0000077,1.27e-07,35;UBERON:0002370,4.18e-07,23;UBERON:0000974,4.18e-07,23;UBERON:0004807,4.18e-07,23;UBERON:0005058,4.18e-07,23;UBERON:0003351,4.18e-07,23;UBERON:0009113,4.18e-07,23;UBERON:0003295,4.18e-07,23;UBERON:0009722,4.18e-07,23;UBERON:0005562,4.18e-07,23;UBERON:0007690,4.18e-07,23;UBERON:0000072,7.88e-07,27 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0,3.74457637980571,1.83025338797167,1.17032263160997,1.88339765048055,1.19658238493005,1.19840510951844,1.74840804837995,1.33243904726265,1.01237633694913,2.09868563438444,0.946386496074713,1.50825876966313,0.42438965179803,1.44573593256819,1.19149141441062,1.82839852397255,0,0.22940928106717,0.57423196411502,0.86152399231815,0,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0,0,3.76678467663217,2.3440060335714,2.09409497589519,3.52938892818609,2.04913645487534,2.42755176515577,0.125896817975577,0.405507724878058,0.367093504323363,0,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,1.51004345451963,2.17608642603403,1.00828139742739,0.771778308107841,0.286533439938757,0,0.404632921719196,0,1.26766280701236,0,0,0.899899717281399,0.988866362566974,1.4209602298922,0.299600110518405,0.768436610643109,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.377857800533928,11.0148505706638,0,1.3599426674155,1.07940638327563,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,0.865964164044856,1.52015919285059,0.505524445014783,0.22836775943812,1.8125651855302,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0.741584903203122,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,2.27648736561249,1.79970819298022,2.1601938602421,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0.497627882440372,1.0108910337347,0,0.130120442962704,0,0.540186389416048,0,0.340182495756639,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,2.1066395619397,1.80143534980301,1.42081749697796,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0.102904612379284,0,0,0.426576501070468,0,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.156998727841375,0.370191491765402,0.592905254174298,0.500535317148282,1.17935397067922,0.899448449539415,0.202860121388503,1.4470629585145,0.25462585178142,0.575392274901621,0.324270453550071,1.09824565275233,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0.369506380333209,1.32643988239339,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,0.117211686592203,0.327869890753351,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.283880170416537,0.178065603667255,0,0.494910368917606,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0.532020700926821,0,0.164549020602121,0.304464949114599,0.704015124191131,0.847328283455281,0.220528398054962,0,0.322928853391811,0.120625849856312,0,0,0,0.18542530201051,1.53783792718067,0.206386867963223,0.370389054739423,1.13021074202815,1.23024804948923,0.457556346413045,5.77926661979108,5.87796099759364,3.86959926652387,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0.621339313086926,3.38215763210514,0.448549638131936,0.165458490457098,0.388902376688095,0.774958940866387,0.168956125490778,0.234714477291508,0.781226309063701,0.524296722128554,1.93267296660805,1.72818003754719,0.948033361884535,0.608175645870493,0.410843828659309,1.16928740680016,1.25318686967237,1.78813219303138,0.480781798079875,1.77227432609493,1.11063094942962,0.533447646584999,0.907435666231565,0.877120926657772,1.34696578296461,0.701261413089414,0,0.221985953374065,0.538283139656854,0.503653849092235,0.19318959403219,0.563047426353546,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0.64183841918363,0,0,0,0,0,0.114870937911227,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0.436039249896986,0.376437521661322,0,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Med7 | |||
}} |
Latest revision as of 13:32, 1 October 2015
Short description: | p4@Med7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Med7_5end |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | 26bp_to_ENSMUST00000156073_5end |
EntrezGene: | Med7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.33e-17 | 46 |
hemolymphoid system | 9.88e-13 | 48 |
immune system | 9.88e-13 | 48 |
hematopoietic system | 1.59e-12 | 45 |
blood island | 1.59e-12 | 45 |
hemopoietic organ | 2.23e-08 | 29 |
immune organ | 2.23e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 1.27e-07 | 35 |
thymus | 4.18e-07 | 23 |
neck | 4.18e-07 | 23 |
respiratory system epithelium | 4.18e-07 | 23 |
hemolymphoid system gland | 4.18e-07 | 23 |
pharyngeal epithelium | 4.18e-07 | 23 |
thymic region | 4.18e-07 | 23 |
pharyngeal gland | 4.18e-07 | 23 |
entire pharyngeal arch endoderm | 4.18e-07 | 23 |
thymus primordium | 4.18e-07 | 23 |
early pharyngeal endoderm | 4.18e-07 | 23 |
segment of respiratory tract | 7.88e-07 | 27 |