FFCP PHASE1:Mm9::chr11:4839936..4839944,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=602|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:4839936..4839944,-|id=chr11:4839936..4839944,-|ontology_enrichment_celltype=CL:0000117!4.30e-09!23;CL:0000337!4.30e-09!23|ontology_enrichment_celltype_v019_2=CL:0002610,4.57e-21,3;CL:0000117,2.54e-18,23;CL:0000337,2.54e-18,23;CL:0000540,1.42e-12,33;CL:0000047,1.42e-12,33;CL:0000031,1.42e-12,33;CL:0000404,1.42e-12,33;CL:0000393,1.56e-10,39;CL:0000211,1.56e-10,39;CL:0002614,2.17e-10,3;CL:0002612,6.83e-10,3;CL:0002319,1.74e-09,43;CL:0000221,2.97e-09,44;CL:0000133,2.97e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.65e-19!52;UBERON:0005068!2.65e-19!52;UBERON:0006241!2.65e-19!52;UBERON:0007135!2.65e-19!52;UBERON:0000073!4.65e-17!75;UBERON:0001016!4.65e-17!75;UBERON:0001017!1.22e-16!73;UBERON:0005743!1.22e-16!73;UBERON:0002616!8.41e-16!49;UBERON:0002346!2.35e-15!71;UBERON:0003075!2.35e-15!71;UBERON:0007284!2.35e-15!71;UBERON:0000955!2.41e-15!50;UBERON:0006238!2.41e-15!50;UBERON:0000033!3.30e-15!63;UBERON:0003076!6.12e-14!12;UBERON:0003057!6.12e-14!12;UBERON:0007811!8.64e-14!86;UBERON:0004121!9.75e-14!102;UBERON:0000924!9.75e-14!102;UBERON:0006601!9.75e-14!102;UBERON:0000153!7.48e-12!94;UBERON:0002298!1.83e-11!6;UBERON:0002240!4.37e-11!6;UBERON:0005174!4.37e-11!6;UBERON:0001137!4.37e-11!6;UBERON:0002020!2.34e-10!34;UBERON:0003056!1.90e-09!49;UBERON:0001948!2.36e-09!5;UBERON:0002315!2.36e-09!5;UBERON:0003080!4.29e-09!40;UBERON:0002780!3.66e-08!39;UBERON:0001890!3.66e-08!39;UBERON:0006240!3.66e-08!39;UBERON:0002950!4.42e-08!4;UBERON:0001891!4.42e-08!4;UBERON:0009616!4.42e-08!4|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.57e-21,3;UBERON:0002275,4.57e-21,3;UBERON:0003076,3.57e-20,12;UBERON:0003057,3.57e-20,12;UBERON:0002240,2.45e-18,6;UBERON:0005174,2.45e-18,6;UBERON:0001137,2.45e-18,6;UBERON:0000073,5.79e-17,54;UBERON:0001896,8.97e-15,2;UBERON:0002298,8.97e-15,2;UBERON:0005290,8.97e-15,2;UBERON:0010096,8.97e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001948,1.27e-12,5;UBERON:0002315,1.27e-12,5;UBERON:0001049,4.17e-12,52;UBERON:0005068,4.17e-12,52;UBERON:0006241,4.17e-12,52;UBERON:0007135,4.17e-12,52;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002038,2.17e-10,3;UBERON:0009663,2.17e-10,3;UBERON:0009661,2.17e-10,3;UBERON:0000125,2.17e-10,3;UBERON:0002308,2.17e-10,3;UBERON:0002257,6.83e-10,3;UBERON:0002346,1.21e-09,64;UBERON:0003075,1.21e-09,64;UBERON:0007284,1.21e-09,64;UBERON:0010371,2.53e-08,73;UBERON:0002950,5.22e-08,4;UBERON:0001891,5.22e-08,4;UBERON:0009616,5.22e-08,4;UBERON:0010286,5.22e-08,4;UBERON:0002020,6.55e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0.34243593645101,0.159544317990673,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.662605622854841,0,0.191690942036473,0,1.10115880999389,3.31987079021488,4.91540906419979,0,0,0,4.74611098302348,0.56276261003168,4.27835093775068,1.76777151284201,1.85083185038834,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.486723789203273,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.6335622843583,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr11:4839936..4839944,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=602 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:4839936..4839944,- | |||
|description=CAGE_peak_at_chr11:4839936..4839944,- | |||
|id=chr11:4839936..4839944,- | |||
|ontology_enrichment_celltype=CL:0000117!4.30e-09!23;CL:0000337!4.30e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.57e-21,3;CL:0000117,2.54e-18,23;CL:0000337,2.54e-18,23;CL:0000540,1.42e-12,33;CL:0000047,1.42e-12,33;CL:0000031,1.42e-12,33;CL:0000404,1.42e-12,33;CL:0000393,1.56e-10,39;CL:0000211,1.56e-10,39;CL:0002614,2.17e-10,3;CL:0002612,6.83e-10,3;CL:0002319,1.74e-09,43;CL:0000221,2.97e-09,44;CL:0000133,2.97e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-19!52;UBERON:0005068!2.65e-19!52;UBERON:0006241!2.65e-19!52;UBERON:0007135!2.65e-19!52;UBERON:0000073!4.65e-17!75;UBERON:0001016!4.65e-17!75;UBERON:0001017!1.22e-16!73;UBERON:0005743!1.22e-16!73;UBERON:0002616!8.41e-16!49;UBERON:0002346!2.35e-15!71;UBERON:0003075!2.35e-15!71;UBERON:0007284!2.35e-15!71;UBERON:0000955!2.41e-15!50;UBERON:0006238!2.41e-15!50;UBERON:0000033!3.30e-15!63;UBERON:0003076!6.12e-14!12;UBERON:0003057!6.12e-14!12;UBERON:0007811!8.64e-14!86;UBERON:0004121!9.75e-14!102;UBERON:0000924!9.75e-14!102;UBERON:0006601!9.75e-14!102;UBERON:0000153!7.48e-12!94;UBERON:0002298!1.83e-11!6;UBERON:0002240!4.37e-11!6;UBERON:0005174!4.37e-11!6;UBERON:0001137!4.37e-11!6;UBERON:0002020!2.34e-10!34;UBERON:0003056!1.90e-09!49;UBERON:0001948!2.36e-09!5;UBERON:0002315!2.36e-09!5;UBERON:0003080!4.29e-09!40;UBERON:0002780!3.66e-08!39;UBERON:0001890!3.66e-08!39;UBERON:0006240!3.66e-08!39;UBERON:0002950!4.42e-08!4;UBERON:0001891!4.42e-08!4;UBERON:0009616!4.42e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.57e-21,3;UBERON:0002275,4.57e-21,3;UBERON:0003076,3.57e-20,12;UBERON:0003057,3.57e-20,12;UBERON:0002240,2.45e-18,6;UBERON:0005174,2.45e-18,6;UBERON:0001137,2.45e-18,6;UBERON:0000073,5.79e-17,54;UBERON:0001896,8.97e-15,2;UBERON:0002298,8.97e-15,2;UBERON:0005290,8.97e-15,2;UBERON:0010096,8.97e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001948,1.27e-12,5;UBERON:0002315,1.27e-12,5;UBERON:0001049,4.17e-12,52;UBERON:0005068,4.17e-12,52;UBERON:0006241,4.17e-12,52;UBERON:0007135,4.17e-12,52;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002038,2.17e-10,3;UBERON:0009663,2.17e-10,3;UBERON:0009661,2.17e-10,3;UBERON:0000125,2.17e-10,3;UBERON:0002308,2.17e-10,3;UBERON:0002257,6.83e-10,3;UBERON:0002346,1.21e-09,64;UBERON:0003075,1.21e-09,64;UBERON:0007284,1.21e-09,64;UBERON:0010371,2.53e-08,73;UBERON:0002950,5.22e-08,4;UBERON:0001891,5.22e-08,4;UBERON:0009616,5.22e-08,4;UBERON:0010286,5.22e-08,4;UBERON:0002020,6.55e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0.34243593645101,0.159544317990673,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.662605622854841,0,0.191690942036473,0,1.10115880999389,3.31987079021488,4.91540906419979,0,0,0,4.74611098302348,0.56276261003168,4.27835093775068,1.76777151284201,1.85083185038834,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.486723789203273,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.6335622843583,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:4839936..4839944,- | |||
}} |
Latest revision as of 23:17, 5 August 2015
Short description: | p@chr11:4839936..4839944, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:4839936..4839944, - |
Coexpression cluster: | MCL_coexpression_mm9:602 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.57e-21 | 3 |
CNS neuron (sensu Vertebrata) | 2.54e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.54e-18 | 23 |
neuron | 1.42e-12 | 33 |
neuronal stem cell | 1.42e-12 | 33 |
neuroblast | 1.42e-12 | 33 |
electrically signaling cell | 1.42e-12 | 33 |
electrically responsive cell | 1.56e-10 | 39 |
electrically active cell | 1.56e-10 | 39 |
neuron of the substantia nigra | 2.17e-10 | 3 |
neuron of the ventral spinal cord | 6.83e-10 | 3 |
neural cell | 1.74e-09 | 43 |
ectodermal cell | 2.97e-09 | 44 |
neurectodermal cell | 2.97e-09 | 44 |