FFCP PHASE1:Hg19::chr3:157824156..157824164,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10854 | |||
|TSSclassifier=strong | |||
|UniProt=O60902 | |||
|association_with_transcript=127bp_to_ENST00000389589_5end | |||
|cluster_id=chr3:157824156..157824164,- | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_4_at_SHOX2_5end | |||
|id=chr3:157824156..157824164,- | |||
|ontology_enrichment_celltype=CL:0002620!2.79e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.54e-23;2!CL:0000242;8.54e-23;2!CL:0000312;1.06e-09;5!CL:0000240;3.13e-08;6!CL:0000311;3.13e-08;6!CL:0000079;3.13e-08;6!CL:0000237;3.13e-08;6!CL:0002535;4.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.89e-23,2;CL:0000312,8.49e-10,5;CL:0000240,2.61e-08,6;CL:0000311,2.61e-08,6;CL:0000079,2.61e-08,6;CL:0000237,2.61e-08,6;CL:0000036,2.61e-08,6;CL:0000357,2.61e-08,6;CL:0000114,2.61e-08,6;CL:0002535,4.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.05e-12;1!UBERON:0003852;1.05e-12;1!CL:0000357;3.13e-08;6!CL:0000114;3.13e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.28e-07!45;UBERON:0002416!1.28e-07!45;UBERON:0002097!3.95e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.05e-12;1!UBERON:0008193;1.05e-12;1!UBERON:0010912;1.05e-12;1!UBERON:0002514;1.05e-12;1!UBERON:0003457;1.05e-12;1!UBERON:0008907;1.05e-12;1!UBERON:0008001;1.05e-12;1!UBERON:0007213;1.05e-12;1!UBERON:0009891;1.05e-12;1!UBERON:0007914;1.05e-12;1!UBERON:0007375;1.05e-12;1!UBERON:0003323;1.05e-12;1!UBERON:0010258;1.05e-12;1!UBERON:0005253;1.05e-12;1!UBERON:0007842;1.05e-12;1!UBERON:0002397;1.05e-12;1!UBERON:0003113;1.05e-12;1!UBERON:0003277;1.05e-12;1!UBERON:0001709;1.05e-12;1!UBERON:0002244;1.05e-12;1!UBERON:0005620;1.05e-12;1!UBERON:0010364;1.05e-12;1!UBERON:0004288;1.05e-12;1!UBERON:0002331;1.49e-10;10!UBERON:0000178;3.32e-07;15!UBERON:0000179;3.32e-07;15!UBERON:0000463;3.32e-07;15!UBERON:0006955;4.82e-07;2!UBERON:0004801;4.82e-07;2!UBERON:0004089;5.57e-07;2!UBERON:0001905;9.01e-07;2!UBERON:0002148;9.01e-07;2!UBERON:0002757;9.01e-07;2!UBERON:0010134;9.01e-07;2!UBERON:0006331;9.01e-07;2!UBERON:0009662;9.01e-07;2!UBERON:0005408;9.01e-07;2!UBERON:0001899;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.11e-12,1;UBERON:0008193,1.11e-12,1;UBERON:0010912,1.11e-12,1;UBERON:0002514,1.11e-12,1;UBERON:0003457,1.11e-12,1;UBERON:0008907,1.11e-12,1;UBERON:0008001,1.11e-12,1;UBERON:0007213,1.11e-12,1;UBERON:0009891,1.11e-12,1;UBERON:0007914,1.11e-12,1;UBERON:0009292,1.11e-12,1;UBERON:0003099,1.11e-12,1;UBERON:0007375,1.11e-12,1;UBERON:0003323,1.11e-12,1;UBERON:0010258,1.11e-12,1;UBERON:0007842,1.11e-12,1;UBERON:0009494,1.11e-12,1;UBERON:0010042,1.11e-12,1;UBERON:0010045,1.11e-12,1;UBERON:0010259,1.11e-12,1;UBERON:0010359,1.11e-12,1;UBERON:0009526,1.11e-12,1;UBERON:0002397,1.11e-12,1;UBERON:0003113,1.11e-12,1;UBERON:0003277,1.11e-12,1;UBERON:0001709,1.11e-12,1;UBERON:0004066,1.11e-12,1;UBERON:0002244,1.11e-12,1;UBERON:0005620,1.11e-12,1;UBERON:0004362,1.11e-12,1;UBERON:0010364,1.11e-12,1;UBERON:0010046,1.11e-12,1;UBERON:0005868,1.11e-12,1;UBERON:0007238,1.11e-12,1;UBERON:0004288,1.11e-12,1;UBERON:0004068,1.11e-12,1;UBERON:0010334,1.11e-12,1;UBERON:0003852,1.11e-12,1;UBERON:0010253,1.11e-12,1;UBERON:0002331,1.09e-10,10;UBERON:0000358,1.09e-10,10;UBERON:0000307,1.09e-10,10;UBERON:0000091,1.09e-10,10;UBERON:0000087,1.09e-10,10;UBERON:0007010,1.09e-10,10;UBERON:0007806,1.09e-10,10;UBERON:0008780,1.09e-10,10;UBERON:0005728,1.09e-10,10;UBERON:0000178,2.71e-07,15;UBERON:0000179,2.71e-07,15;UBERON:0000463,2.71e-07,15;UBERON:0006955,4.83e-07,2;UBERON:0004801,4.83e-07,2;UBERON:0005253,5.73e-07,2;UBERON:0004089,5.73e-07,2;UBERON:0002148,8.52e-07,2;UBERON:0006331,8.52e-07,2;UBERON:0009662,8.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.423863802319124,0,0.309157587715317,0.515281080091258,0.37223371266318,0,0,0,0.184099797284599,0,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824125183365091,1.15513299888823,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,2.28234679033192,0,0,0,0,0,0,0,0.614481528616916,0.894704431569664,2.0021897005429,0,1.11362469558097,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80218419206545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,4.13692047889758,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0.335643173951685,0.189753732724185,0,0,0.163232808159148,0,0.216388639742091,0,0,0,3.85477467284809,1.97702302314405,1.98401704060365,0.134802265961354,0,0.702793337176017,0,0,0.485560759068186,0,0,0,0,0.150323419414493,0.414752765588989,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0.160317640503067,0,0,0,0,35.8633545531506,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.101998217636322,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.08270229666224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0.511164065356265,0,0,0,1.29282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0.303298235083296,0,0,1.40500471742064,1.88397337194073,0,0,0,0.378806010550178,0.251567901752575,0,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0.754773679776773,0,0.655257829152084,0,0.637724760305049,0,0,0.318004350653419,0.0788617450012534,0,3.52675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,1.00885116665647,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,1.14028650910293,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SHOX2 | |||
}} |
Latest revision as of 08:16, 16 September 2015
Short description: | p4@SHOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHOX2_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | 127bp_to_ENST00000389589_5end |
EntrezGene: | SHOX2 |
HGNC: | 10854 |
UniProt: | O60902 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.89e-23 | 2 |
keratinocyte | 8.49e-10 | 5 |
stratified squamous epithelial cell | 2.61e-08 | 6 |
keratin accumulating cell | 2.61e-08 | 6 |
stratified epithelial cell | 2.61e-08 | 6 |
keratinizing barrier epithelial cell | 2.61e-08 | 6 |
epithelial fate stem cell | 2.61e-08 | 6 |
stratified epithelial stem cell | 2.61e-08 | 6 |
surface ectodermal cell | 2.61e-08 | 6 |
epithelial cell of cervix | 4.83e-07 | 2 |