FFCP PHASE1:Mm9::chr12:55340225..55340232,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1020|UniProt=|association_with_transcript=0bp_to_ENSMUST00000082671_5end|description=CAGE_peak_1_at_ENSMUST00000082671_5end|id=chr12:55340225..55340232,+|ontology_enrichment_celltype=CL:0000548!7.07e-32!115;CL:0000004!7.07e-32!115;CL:0000255!7.07e-32!115;CL:0002371!2.02e-31!118;CL:0000144!8.54e-31!121;CL:0000012!8.54e-31!121;CL:0002319!1.31e-29!43;CL:0000221!1.55e-28!44;CL:0000133!1.55e-28!44;CL:0002321!3.25e-28!70;CL:0000220!3.25e-28!70;CL:0000055!3.51e-28!50;CL:0000034!3.63e-27!97;CL:0000723!1.79e-26!91;CL:0000048!1.79e-26!91;CL:0000540!6.45e-23!33;CL:0000047!6.45e-23!33;CL:0000031!6.45e-23!33;CL:0000404!6.45e-23!33;CL:0000393!2.34e-22!39;CL:0000211!2.34e-22!39;CL:0000117!2.18e-19!23;CL:0000337!2.18e-19!23;CL:0000219!1.77e-11!54;CL:0002320!9.17e-08!46;CL:0000134!9.17e-08!46;CL:0000333!2.36e-07!10;CL:0000095!2.36e-07!10;CL:0000243!2.36e-07!10;CL:0000123!2.36e-07!10;CL:0000125!2.36e-07!10;CL:0000030!2.36e-07!10;CL:0000339!2.36e-07!10;CL:0002453!4.06e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,7.88e-40,43;CL:0000221,1.14e-38,44;CL:0000133,1.14e-38,44;CL:0002321,5.31e-37,70;CL:0000393,1.26e-34,39;CL:0000211,1.26e-34,39;CL:0000540,2.65e-34,33;CL:0000047,2.65e-34,33;CL:0000031,2.65e-34,33;CL:0000404,2.65e-34,33;CL:0000723,1.39e-30,91;CL:0000048,1.39e-30,91;CL:0000117,3.73e-30,23;CL:0000337,3.73e-30,23;CL:0000034,7.68e-28,97;CL:0002609,1.01e-08,6;CL:0002453,1.72e-08,8;CL:0000219,9.39e-08,54;CL:0000107,5.47e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.59e-24!75;UBERON:0001016!4.59e-24!75;UBERON:0001017!1.97e-23!73;UBERON:0005743!1.97e-23!73;UBERON:0002020!3.68e-19!34;UBERON:0002791!3.66e-15!29;UBERON:0003528!3.66e-15!29;UBERON:0001893!3.66e-15!29;UBERON:0004121!4.84e-14!102;UBERON:0000924!4.84e-14!102;UBERON:0006601!4.84e-14!102;UBERON:0001049!2.22e-12!52;UBERON:0005068!2.22e-12!52;UBERON:0006241!2.22e-12!52;UBERON:0007135!2.22e-12!52;UBERON:0002616!2.16e-11!49;UBERON:0000956!2.75e-11!21;UBERON:0001869!2.75e-11!21;UBERON:0000203!2.75e-11!21;UBERON:0000955!6.21e-11!50;UBERON:0006238!6.21e-11!50;UBERON:0003080!7.90e-10!40;UBERON:0002780!1.35e-09!39;UBERON:0001890!1.35e-09!39;UBERON:0006240!1.35e-09!39;UBERON:0002346!2.63e-09!71;UBERON:0003075!2.63e-09!71;UBERON:0007284!2.63e-09!71;UBERON:0002619!5.25e-09!17;UBERON:0002384!9.17e-08!46;UBERON:0002021!3.26e-07!10;UBERON:0000411!3.26e-07!10;UBERON:0001950!3.26e-07!10;UBERON:0000033!6.66e-07!63;UBERON:0003056!7.34e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.54e-29,73;UBERON:0001016,5.83e-28,75;UBERON:0002020,8.65e-23,34;UBERON:0004121,1.80e-19,95;UBERON:0000924,1.80e-19,95;UBERON:0006601,1.80e-19,95;UBERON:0003528,7.52e-17,29;UBERON:0002791,7.52e-17,29;UBERON:0001893,7.52e-17,29;UBERON:0000073,1.23e-16,54;UBERON:0001049,1.52e-13,52;UBERON:0005068,1.52e-13,52;UBERON:0006241,1.52e-13,52;UBERON:0007135,1.52e-13,52;UBERON:0000956,1.06e-11,21;UBERON:0001869,1.06e-11,21;UBERON:0000203,1.06e-11,21;UBERON:0002346,2.00e-11,64;UBERON:0003075,2.00e-11,64;UBERON:0007284,2.00e-11,64;UBERON:0002780,5.14e-11,39;UBERON:0001890,5.14e-11,39;UBERON:0006240,5.14e-11,39;UBERON:0003080,1.35e-10,40;UBERON:0002616,1.44e-09,46;UBERON:0002619,2.03e-09,17;UBERON:0000955,3.06e-09,47;UBERON:0006238,3.06e-09,47;UBERON:0010371,4.55e-09,73;UBERON:0010314,7.70e-08,92;UBERON:0001948,9.59e-08,5;UBERON:0002315,9.59e-08,5;UBERON:0003056,1.21e-07,49;UBERON:0011216,2.25e-07,194;UBERON:0002410,5.47e-07,9|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0.84473233291,0.234064526321993,0.34243593645101,0.239316476986009,0.513602189793617,0.174840804837995,1.33243904726265,0,2.79824751251259,0,0.685572168028694,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,3.17515336729816,21.52726756546,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,2.41654801007919,3.88859798148567,2.65974201088189,12.9377307928474,0,0,0,2.57259436035947,4.58453503902011,16.5015069528782,3.23706337375356,11.1088105647127,13.9442908771359,1.69422266034566,2.66788438833342,5.39939830368839,10.8775299882367,15.6305625288142,10.7856039786626,5.37905627450176,3.31806759387129,5.26523159493594,2.94454945891935,7.14127461009509,6.62605622854841,3.55223317723367,4.31304619582064,17.4651569455904,1.10115880999389,4.97980618532232,8.90917892886212,5.27545150920775,7.04454855738554,1.56274011167028,6.14202597803038,7.87867654044352,5.80633341551878,11.7851434189467,3.55929201997757,2.05039390407831,0.302904773332736,0.0755715601067855,0.869593466105033,0,2.719885334831,15.1116893658589,5.84798775702902,6.2723764193627,0,0,0.519572009205738,0,0,1.28326477414318,0,0,2.16491041011214,1.77351905832569,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,1.50791283939272,9.79030230873677,0,0,0,0.117211686592203,0,0,1.26203287766503,0.390438744296638,2.36965737506079,1.19484398976276,1.33679204449436,1.69845918473299,1.21443210502468,1.46127928955656,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.665957860122194,0.179427713218951,0.839423081820392,0,0.187682475451182,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,7.90524638780963,5.48066015816514,3.0215755895588,2.70009000092722,1.80128481289688,0.906284817968409,1.55328093525546,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p1@ENSMUST00000082671}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1020 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000082671_5end | |||
|cluster_id=chr12:55340225..55340232,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000082671_5end | |||
|id=chr12:55340225..55340232,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.07e-32!115;CL:0000004!7.07e-32!115;CL:0000255!7.07e-32!115;CL:0002371!2.02e-31!118;CL:0000144!8.54e-31!121;CL:0000012!8.54e-31!121;CL:0002319!1.31e-29!43;CL:0000221!1.55e-28!44;CL:0000133!1.55e-28!44;CL:0002321!3.25e-28!70;CL:0000220!3.25e-28!70;CL:0000055!3.51e-28!50;CL:0000034!3.63e-27!97;CL:0000723!1.79e-26!91;CL:0000048!1.79e-26!91;CL:0000540!6.45e-23!33;CL:0000047!6.45e-23!33;CL:0000031!6.45e-23!33;CL:0000404!6.45e-23!33;CL:0000393!2.34e-22!39;CL:0000211!2.34e-22!39;CL:0000117!2.18e-19!23;CL:0000337!2.18e-19!23;CL:0000219!1.77e-11!54;CL:0002320!9.17e-08!46;CL:0000134!9.17e-08!46;CL:0000333!2.36e-07!10;CL:0000095!2.36e-07!10;CL:0000243!2.36e-07!10;CL:0000123!2.36e-07!10;CL:0000125!2.36e-07!10;CL:0000030!2.36e-07!10;CL:0000339!2.36e-07!10;CL:0002453!4.06e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.88e-40,43;CL:0000221,1.14e-38,44;CL:0000133,1.14e-38,44;CL:0002321,5.31e-37,70;CL:0000393,1.26e-34,39;CL:0000211,1.26e-34,39;CL:0000540,2.65e-34,33;CL:0000047,2.65e-34,33;CL:0000031,2.65e-34,33;CL:0000404,2.65e-34,33;CL:0000723,1.39e-30,91;CL:0000048,1.39e-30,91;CL:0000117,3.73e-30,23;CL:0000337,3.73e-30,23;CL:0000034,7.68e-28,97;CL:0002609,1.01e-08,6;CL:0002453,1.72e-08,8;CL:0000219,9.39e-08,54;CL:0000107,5.47e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.59e-24!75;UBERON:0001016!4.59e-24!75;UBERON:0001017!1.97e-23!73;UBERON:0005743!1.97e-23!73;UBERON:0002020!3.68e-19!34;UBERON:0002791!3.66e-15!29;UBERON:0003528!3.66e-15!29;UBERON:0001893!3.66e-15!29;UBERON:0004121!4.84e-14!102;UBERON:0000924!4.84e-14!102;UBERON:0006601!4.84e-14!102;UBERON:0001049!2.22e-12!52;UBERON:0005068!2.22e-12!52;UBERON:0006241!2.22e-12!52;UBERON:0007135!2.22e-12!52;UBERON:0002616!2.16e-11!49;UBERON:0000956!2.75e-11!21;UBERON:0001869!2.75e-11!21;UBERON:0000203!2.75e-11!21;UBERON:0000955!6.21e-11!50;UBERON:0006238!6.21e-11!50;UBERON:0003080!7.90e-10!40;UBERON:0002780!1.35e-09!39;UBERON:0001890!1.35e-09!39;UBERON:0006240!1.35e-09!39;UBERON:0002346!2.63e-09!71;UBERON:0003075!2.63e-09!71;UBERON:0007284!2.63e-09!71;UBERON:0002619!5.25e-09!17;UBERON:0002384!9.17e-08!46;UBERON:0002021!3.26e-07!10;UBERON:0000411!3.26e-07!10;UBERON:0001950!3.26e-07!10;UBERON:0000033!6.66e-07!63;UBERON:0003056!7.34e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.54e-29,73;UBERON:0001016,5.83e-28,75;UBERON:0002020,8.65e-23,34;UBERON:0004121,1.80e-19,95;UBERON:0000924,1.80e-19,95;UBERON:0006601,1.80e-19,95;UBERON:0003528,7.52e-17,29;UBERON:0002791,7.52e-17,29;UBERON:0001893,7.52e-17,29;UBERON:0000073,1.23e-16,54;UBERON:0001049,1.52e-13,52;UBERON:0005068,1.52e-13,52;UBERON:0006241,1.52e-13,52;UBERON:0007135,1.52e-13,52;UBERON:0000956,1.06e-11,21;UBERON:0001869,1.06e-11,21;UBERON:0000203,1.06e-11,21;UBERON:0002346,2.00e-11,64;UBERON:0003075,2.00e-11,64;UBERON:0007284,2.00e-11,64;UBERON:0002780,5.14e-11,39;UBERON:0001890,5.14e-11,39;UBERON:0006240,5.14e-11,39;UBERON:0003080,1.35e-10,40;UBERON:0002616,1.44e-09,46;UBERON:0002619,2.03e-09,17;UBERON:0000955,3.06e-09,47;UBERON:0006238,3.06e-09,47;UBERON:0010371,4.55e-09,73;UBERON:0010314,7.70e-08,92;UBERON:0001948,9.59e-08,5;UBERON:0002315,9.59e-08,5;UBERON:0003056,1.21e-07,49;UBERON:0011216,2.25e-07,194;UBERON:0002410,5.47e-07,9 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.387369970324729,0.84473233291,0.234064526321993,0.34243593645101,0.239316476986009,0.513602189793617,0.174840804837995,1.33243904726265,0,2.79824751251259,0,0.685572168028694,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,3.17515336729816,21.52726756546,0,0,0,0,0.837063261473815,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,2.41654801007919,3.88859798148567,2.65974201088189,12.9377307928474,0,0,0,2.57259436035947,4.58453503902011,16.5015069528782,3.23706337375356,11.1088105647127,13.9442908771359,1.69422266034566,2.66788438833342,5.39939830368839,10.8775299882367,15.6305625288142,10.7856039786626,5.37905627450176,3.31806759387129,5.26523159493594,2.94454945891935,7.14127461009509,6.62605622854841,3.55223317723367,4.31304619582064,17.4651569455904,1.10115880999389,4.97980618532232,8.90917892886212,5.27545150920775,7.04454855738554,1.56274011167028,6.14202597803038,7.87867654044352,5.80633341551878,11.7851434189467,3.55929201997757,2.05039390407831,0.302904773332736,0.0755715601067855,0.869593466105033,0,2.719885334831,15.1116893658589,5.84798775702902,6.2723764193627,0,0,0.519572009205738,0,0,1.28326477414318,0,0,2.16491041011214,1.77351905832569,0.505524445014783,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,1.50791283939272,9.79030230873677,0,0,0,0.117211686592203,0,0,1.26203287766503,0.390438744296638,2.36965737506079,1.19484398976276,1.33679204449436,1.69845918473299,1.21443210502468,1.46127928955656,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.665957860122194,0.179427713218951,0.839423081820392,0,0.187682475451182,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,7.90524638780963,5.48066015816514,3.0215755895588,2.70009000092722,1.80128481289688,0.906284817968409,1.55328093525546,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000082671 | |||
}} |
Latest revision as of 02:38, 5 August 2015
Short description: | p1@ENSMUST00000082671 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082671_5end |
Coexpression cluster: | MCL_coexpression_mm9:1020 |
Association with transcript: | 0bp_to_ENSMUST00000082671_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.88e-40 | 43 |
ectodermal cell | 1.14e-38 | 44 |
neurectodermal cell | 1.14e-38 | 44 |
embryonic cell | 5.31e-37 | 70 |
electrically responsive cell | 1.26e-34 | 39 |
electrically active cell | 1.26e-34 | 39 |
neuron | 2.65e-34 | 33 |
neuronal stem cell | 2.65e-34 | 33 |
neuroblast | 2.65e-34 | 33 |
electrically signaling cell | 2.65e-34 | 33 |
somatic stem cell | 1.39e-30 | 91 |
multi fate stem cell | 1.39e-30 | 91 |
CNS neuron (sensu Vertebrata) | 3.73e-30 | 23 |
neuroblast (sensu Vertebrata) | 3.73e-30 | 23 |
stem cell | 7.68e-28 | 97 |
neuron of cerebral cortex | 1.01e-08 | 6 |
oligodendrocyte precursor cell | 1.72e-08 | 8 |
motile cell | 9.39e-08 | 54 |
autonomic neuron | 5.47e-07 | 9 |