FFCP PHASE1:Mm9::chr12:84938061..84938071,-: Difference between revisions
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{{FFCP|EntrezGene=217695|HGNC=|UniProt=Q810J8|association_with_transcript=25bp_to_ENSMUST00000048319,NM_183154,uc007odg.1,uc007odh.1,uc007odi.1_5end|description=CAGE_peak_4_at_Zfyve1_5end|id=chr12:84938061..84938071,-|ontology_enrichment_celltype=CL:0000221!4.85e-17!44;CL:0000133!4.85e-17!44;CL:0002319!1.30e-16!43;CL:0000055!5.62e-16!50;CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39;CL:0000540!2.29e-12!33;CL:0000047!2.29e-12!33;CL:0000031!2.29e-12!33;CL:0000404!2.29e-12!33;CL:0002321!1.55e-10!70;CL:0000220!1.55e-10!70|ontology_enrichment_celltype_v019_2=CL:0002319,2.86e-27,43;CL:0000221,1.56e-26,44;CL:0000133,1.56e-26,44;CL:0000117,1.40e-25,23;CL:0000337,1.40e-25,23;CL:0002321,5.67e-22,70;CL:0000393,6.12e-20,39;CL:0000211,6.12e-20,39;CL:0000540,5.34e-19,33;CL:0000047,5.34e-19,33;CL:0000031,5.34e-19,33;CL:0000404,5.34e-19,33;CL:0000723,2.18e-14,91;CL:0000048,2.18e-14,91;CL:0000034,3.84e-13,97;CL:0002453,1.49e-11,8;CL:0002609,7.82e-11,6;CL:0000333,4.19e-09,10;CL:0000095,4.19e-09,10;CL:0000243,4.19e-09,10;CL:0000123,4.19e-09,10;CL:0000125,4.19e-09,10;CL:0000030,4.19e-09,10;CL:0000339,4.19e-09,10;CL:0002610,3.05e-08,3;CL:0000128,5.81e-07,6;CL:0000126,5.81e-07,6;CL:0000127,5.81e-07,6;CL:0000878,7.62e-07,2;CL:0000129,7.62e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.98e-15!75;UBERON:0001016!5.98e-15!75;UBERON:0001017!5.32e-14!73;UBERON:0005743!5.32e-14!73;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0001049!1.35e-08!52;UBERON:0005068!1.35e-08!52;UBERON:0006241!1.35e-08!52;UBERON:0007135!1.35e-08!52;UBERON:0002020!1.99e-08!34;UBERON:0002616!8.50e-08!49;UBERON:0000033!9.85e-08!63;UBERON:0002346!1.04e-07!71;UBERON:0003075!1.04e-07!71;UBERON:0007284!1.04e-07!71;UBERON:0000955!2.60e-07!50;UBERON:0006238!2.60e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.49e-17,73;UBERON:0001016,2.95e-16,75;UBERON:0004121,1.12e-11,95;UBERON:0000924,1.12e-11,95;UBERON:0006601,1.12e-11,95;UBERON:0000073,2.03e-11,54;UBERON:0002020,3.09e-10,34;UBERON:0003528,9.43e-09,29;UBERON:0002791,9.43e-09,29;UBERON:0001893,9.43e-09,29;UBERON:0004684,3.05e-08,3;UBERON:0002275,3.05e-08,3;UBERON:0002420,6.65e-08,8;UBERON:0007245,6.65e-08,8;UBERON:0010009,6.65e-08,8;UBERON:0010011,6.65e-08,8;UBERON:0000454,6.65e-08,8;UBERON:0001049,6.93e-08,52;UBERON:0005068,6.93e-08,52;UBERON:0006241,6.93e-08,52;UBERON:0007135,6.93e-08,52;UBERON:0002780,3.80e-07,39;UBERON:0001890,3.80e-07,39;UBERON:0006240,3.80e-07,39;UBERON:0003080,6.56e-07,40;UBERON:0002616,9.53e-07,46|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.503637815735669,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0.198581902401771,0,0.319984845586813,0.22940928106717,1.72269589234506,0.430761996159075,0.861884930743556,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,2.3440060335714,0,0,0,0.485510353031154,0.125896817975577,0.304130793658544,0,0,1.09012578190223,1.75748946187577,0.58328969722285,1.1198913730029,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,3.09403255366465,0.809265843438391,1.5869729378161,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,2.8419204597844,2.39680088414724,3.45796474789399,1.45165457231869,2.16009501330705,1.05162480675691,0.571301968807607,0.662605622854841,0.734944795289724,2.1086003624012,1.83843757322004,1.10115880999389,1.91531007127782,1.53606533256243,0.395658863190582,3.65950574409639,1.04182674111352,0.279182999001381,3.37657566019008,1.37518422999129,1.76777151284201,0.854230084794618,1.3047961207771,0.832988126665025,0.982430281388212,0,0,0,3.77792234146472,0,1.79210754838934,0.561777680527007,0.511290967734173,0,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0,0.445326417194474,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0.376999773989026,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0.457500602818626,1.00523481690292,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0.101839363850316,0.248813941220186,0.505445516867349,0.631325567659422,0.260240885925407,0.459804208866946,0,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0.568326998791185,0,0,0.36012412292203,0,0.393528463494808,0,0.232533944750408,0.536546802799238,0.233530684734339,0.16455984991348,0,0.324275238183423,0.438599962275997,0,0.268412837520744,0,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.994782360205754,0,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0,1.1270773567308,0.203651327845314,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217695 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q810J8 | |||
|association_with_transcript=25bp_to_ENSMUST00000048319,NM_183154,uc007odg.1,uc007odh.1,uc007odi.1_5end | |||
|cluster_id=chr12:84938061..84938071,- | |||
|description=CAGE_peak_4_at_Zfyve1_5end | |||
|id=chr12:84938061..84938071,- | |||
|ontology_enrichment_celltype=CL:0000221!4.85e-17!44;CL:0000133!4.85e-17!44;CL:0002319!1.30e-16!43;CL:0000055!5.62e-16!50;CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39;CL:0000540!2.29e-12!33;CL:0000047!2.29e-12!33;CL:0000031!2.29e-12!33;CL:0000404!2.29e-12!33;CL:0002321!1.55e-10!70;CL:0000220!1.55e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.86e-27,43;CL:0000221,1.56e-26,44;CL:0000133,1.56e-26,44;CL:0000117,1.40e-25,23;CL:0000337,1.40e-25,23;CL:0002321,5.67e-22,70;CL:0000393,6.12e-20,39;CL:0000211,6.12e-20,39;CL:0000540,5.34e-19,33;CL:0000047,5.34e-19,33;CL:0000031,5.34e-19,33;CL:0000404,5.34e-19,33;CL:0000723,2.18e-14,91;CL:0000048,2.18e-14,91;CL:0000034,3.84e-13,97;CL:0002453,1.49e-11,8;CL:0002609,7.82e-11,6;CL:0000333,4.19e-09,10;CL:0000095,4.19e-09,10;CL:0000243,4.19e-09,10;CL:0000123,4.19e-09,10;CL:0000125,4.19e-09,10;CL:0000030,4.19e-09,10;CL:0000339,4.19e-09,10;CL:0002610,3.05e-08,3;CL:0000128,5.81e-07,6;CL:0000126,5.81e-07,6;CL:0000127,5.81e-07,6;CL:0000878,7.62e-07,2;CL:0000129,7.62e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.98e-15!75;UBERON:0001016!5.98e-15!75;UBERON:0001017!5.32e-14!73;UBERON:0005743!5.32e-14!73;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0001049!1.35e-08!52;UBERON:0005068!1.35e-08!52;UBERON:0006241!1.35e-08!52;UBERON:0007135!1.35e-08!52;UBERON:0002020!1.99e-08!34;UBERON:0002616!8.50e-08!49;UBERON:0000033!9.85e-08!63;UBERON:0002346!1.04e-07!71;UBERON:0003075!1.04e-07!71;UBERON:0007284!1.04e-07!71;UBERON:0000955!2.60e-07!50;UBERON:0006238!2.60e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.49e-17,73;UBERON:0001016,2.95e-16,75;UBERON:0004121,1.12e-11,95;UBERON:0000924,1.12e-11,95;UBERON:0006601,1.12e-11,95;UBERON:0000073,2.03e-11,54;UBERON:0002020,3.09e-10,34;UBERON:0003528,9.43e-09,29;UBERON:0002791,9.43e-09,29;UBERON:0001893,9.43e-09,29;UBERON:0004684,3.05e-08,3;UBERON:0002275,3.05e-08,3;UBERON:0002420,6.65e-08,8;UBERON:0007245,6.65e-08,8;UBERON:0010009,6.65e-08,8;UBERON:0010011,6.65e-08,8;UBERON:0000454,6.65e-08,8;UBERON:0001049,6.93e-08,52;UBERON:0005068,6.93e-08,52;UBERON:0006241,6.93e-08,52;UBERON:0007135,6.93e-08,52;UBERON:0002780,3.80e-07,39;UBERON:0001890,3.80e-07,39;UBERON:0006240,3.80e-07,39;UBERON:0003080,6.56e-07,40;UBERON:0002616,9.53e-07,46 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.503637815735669,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.765389611359628,0.198581902401771,0,0.319984845586813,0.22940928106717,1.72269589234506,0.430761996159075,0.861884930743556,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,2.3440060335714,0,0,0,0.485510353031154,0.125896817975577,0.304130793658544,0,0,1.09012578190223,1.75748946187577,0.58328969722285,1.1198913730029,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,3.09403255366465,0.809265843438391,1.5869729378161,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,2.8419204597844,2.39680088414724,3.45796474789399,1.45165457231869,2.16009501330705,1.05162480675691,0.571301968807607,0.662605622854841,0.734944795289724,2.1086003624012,1.83843757322004,1.10115880999389,1.91531007127782,1.53606533256243,0.395658863190582,3.65950574409639,1.04182674111352,0.279182999001381,3.37657566019008,1.37518422999129,1.76777151284201,0.854230084794618,1.3047961207771,0.832988126665025,0.982430281388212,0,0,0,3.77792234146472,0,1.79210754838934,0.561777680527007,0.511290967734173,0,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0,0.445326417194474,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0.376999773989026,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0.457500602818626,1.00523481690292,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0.101839363850316,0.248813941220186,0.505445516867349,0.631325567659422,0.260240885925407,0.459804208866946,0,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0,0.568326998791185,0,0,0.36012412292203,0,0.393528463494808,0,0.232533944750408,0.536546802799238,0.233530684734339,0.16455984991348,0,0.324275238183423,0.438599962275997,0,0.268412837520744,0,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.994782360205754,0,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.210407459670956,0.189709611372772,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0.315270288212382,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0.321101179975584,0.35163505977661,0.163934945376675,0.757412781613119,0,0.390438744296638,0.646270193198397,0.716906393857656,0.222798674082394,0,0.404810701674894,1.16902343164525,0.395287777946524,0,0.283880170416537,0.35613120733451,0.325773918707152,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.129358683782755,0,0.709360934569094,0.535106452806212,1.15184314421485,0.608929898229199,0.23467170806371,1.48282449604674,0.661585194164886,0,0.807322133479528,0.301564624640779,0.119372344003136,0,0.291480836629851,0.556275906031529,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0,0.324016022465404,0.209088296014469,0,0,0.247960367176008,0,0.388844919875379,0.621339313086926,0.56369293868419,0.299033092087958,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.538283139656854,0.503653849092235,0.19318959403219,0,0.183151624267265,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0.906284817968409,0,0.207574695168353,0,0.512200817262403,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0,0.463537303779422,0.38581844092741,0.412085900803307,0.147198920134397,0,0.532427418478012,0.715308569841963,0,0.188218760830661,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p4@Zfyve1 | |||
}} |
Latest revision as of 21:46, 26 September 2015
Short description: | p4@Zfyve1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zfyve1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000048319, NM_183154, uc007odg.1, uc007odh.1, uc007odi.1_5end |
EntrezGene: | Zfyve1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.86e-27 | 43 |
ectodermal cell | 1.56e-26 | 44 |
neurectodermal cell | 1.56e-26 | 44 |
CNS neuron (sensu Vertebrata) | 1.40e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-25 | 23 |
embryonic cell | 5.67e-22 | 70 |
electrically responsive cell | 6.12e-20 | 39 |
electrically active cell | 6.12e-20 | 39 |
neuron | 5.34e-19 | 33 |
neuronal stem cell | 5.34e-19 | 33 |
neuroblast | 5.34e-19 | 33 |
electrically signaling cell | 5.34e-19 | 33 |
somatic stem cell | 2.18e-14 | 91 |
multi fate stem cell | 2.18e-14 | 91 |
stem cell | 3.84e-13 | 97 |
oligodendrocyte precursor cell | 1.49e-11 | 8 |
neuron of cerebral cortex | 7.82e-11 | 6 |
migratory neural crest cell | 4.19e-09 | 10 |
neuron associated cell | 4.19e-09 | 10 |
glial cell (sensu Vertebrata) | 4.19e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 4.19e-09 | 10 |
glial cell | 4.19e-09 | 10 |
glioblast | 4.19e-09 | 10 |
glioblast (sensu Vertebrata) | 4.19e-09 | 10 |
raphe nuclei neuron | 3.05e-08 | 3 |
oligodendrocyte | 5.81e-07 | 6 |
macroglial cell | 5.81e-07 | 6 |
astrocyte | 5.81e-07 | 6 |
central nervous system macrophage | 7.62e-07 | 2 |
microglial cell | 7.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.49e-17 | 73 |
nervous system | 2.95e-16 | 75 |
ectoderm-derived structure | 1.12e-11 | 95 |
ectoderm | 1.12e-11 | 95 |
presumptive ectoderm | 1.12e-11 | 95 |
regional part of nervous system | 2.03e-11 | 54 |
gray matter | 3.09e-10 | 34 |
brain grey matter | 9.43e-09 | 29 |
regional part of telencephalon | 9.43e-09 | 29 |
telencephalon | 9.43e-09 | 29 |
raphe nuclei | 3.05e-08 | 3 |
reticular formation | 3.05e-08 | 3 |
basal ganglion | 6.65e-08 | 8 |
nuclear complex of neuraxis | 6.65e-08 | 8 |
aggregate regional part of brain | 6.65e-08 | 8 |
collection of basal ganglia | 6.65e-08 | 8 |
cerebral subcortex | 6.65e-08 | 8 |
neural tube | 6.93e-08 | 52 |
neural rod | 6.93e-08 | 52 |
future spinal cord | 6.93e-08 | 52 |
neural keel | 6.93e-08 | 52 |
regional part of forebrain | 3.80e-07 | 39 |
forebrain | 3.80e-07 | 39 |
future forebrain | 3.80e-07 | 39 |
anterior neural tube | 6.56e-07 | 40 |
regional part of brain | 9.53e-07 | 46 |