FFCP PHASE1:Mm9::chr16:23175296..23175310,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=291|UniProt=|association_with_transcript=-42bp_to_uc007ytl.1_5end|description=CAGE_peak_3_at_uc007ytl.1_5end|id=chr16:23175296..23175310,+|ontology_enrichment_celltype=CL:0000624!1.09e-26!8;CL:0000791!1.41e-23!9;CL:0000789!1.41e-23!9;CL:0002420!1.41e-23!9;CL:0002419!1.41e-23!9;CL:0000790!1.41e-23!9;CL:0000893!1.86e-20!6;CL:0002489!1.86e-20!6;CL:0000898!1.86e-20!6;CL:0000809!1.86e-20!6;CL:0000810!1.86e-20!6;CL:0000895!1.86e-20!6;CL:0000808!1.86e-20!6;CL:0000894!1.86e-20!6;CL:0000806!1.86e-20!6;CL:0000807!1.86e-20!6;CL:0000805!1.86e-20!6;CL:0002425!1.86e-20!6;CL:0002436!1.86e-20!6;CL:0002427!1.86e-20!6;CL:0002428!1.86e-20!6;CL:0002429!1.86e-20!6;CL:0002433!1.86e-20!6;CL:0002431!1.86e-20!6;CL:0002432!1.86e-20!6;CL:0000084!4.76e-19!11;CL:0000827!4.76e-19!11;CL:0000838!2.38e-17!12;CL:0000542!6.53e-16!13;CL:0000051!6.53e-16!13;CL:0000738!7.54e-12!17;CL:0002087!7.54e-12!17;CL:0002031!1.35e-11!25;CL:0000988!1.20e-08!32;CL:0002032!1.20e-08!32;CL:0000037!1.20e-08!32;CL:0000566!1.20e-08!32;CL:0000837!1.20e-08!32|ontology_enrichment_celltype_v019_2=CL:0000624,2.02e-77,8;CL:0000791,7.69e-69,9;CL:0000789,7.69e-69,9;CL:0002420,7.69e-69,9;CL:0002419,7.69e-69,9;CL:0000790,7.69e-69,9;CL:0000893,1.71e-58,6;CL:0002489,1.71e-58,6;CL:0000898,1.71e-58,6;CL:0000809,1.71e-58,6;CL:0000810,1.71e-58,6;CL:0000895,1.71e-58,6;CL:0000808,1.71e-58,6;CL:0000894,1.71e-58,6;CL:0000806,1.71e-58,6;CL:0000807,1.71e-58,6;CL:0000805,1.71e-58,6;CL:0002425,1.71e-58,6;CL:0002436,1.71e-58,6;CL:0002427,1.71e-58,6;CL:0002428,1.71e-58,6;CL:0002429,1.71e-58,6;CL:0002433,1.71e-58,6;CL:0002431,1.71e-58,6;CL:0002432,1.71e-58,6;CL:0000084,2.37e-56,11;CL:0000827,2.37e-56,11;CL:0000838,1.15e-51,12;CL:0000542,1.06e-47,13;CL:0000051,1.06e-47,13;CL:0000738,1.72e-36,17;CL:0002087,1.72e-36,17;CL:0002031,8.28e-25,25;CL:0000988,2.32e-19,32;CL:0002032,2.32e-19,32;CL:0000037,2.32e-19,32;CL:0000837,2.32e-19,32;CL:0002320,2.04e-13,46;CL:0000134,2.04e-13,46;CL:0000219,2.15e-11,54;CL:0000815,7.19e-11,1;CL:0000792,7.19e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.47e-37!23;UBERON:0000974!2.47e-37!23;UBERON:0004807!2.47e-37!23;UBERON:0005058!2.47e-37!23;UBERON:0003351!2.47e-37!23;UBERON:0009113!2.47e-37!23;UBERON:0003295!2.47e-37!23;UBERON:0009722!2.47e-37!23;UBERON:0005562!2.47e-37!23;UBERON:0007690!2.47e-37!23;UBERON:0006562!1.25e-35!24;UBERON:0003408!1.25e-35!24;UBERON:0001557!1.25e-35!24;UBERON:0001042!1.25e-35!24;UBERON:0008814!1.25e-35!24;UBERON:0009145!1.25e-35!24;UBERON:0004177!1.57e-32!29;UBERON:0000072!2.82e-31!27;UBERON:0000063!3.14e-26!35;UBERON:0002193!3.43e-25!48;UBERON:0002390!1.80e-24!45;UBERON:0003061!1.80e-24!45;UBERON:0000065!2.39e-24!41;UBERON:0001004!1.13e-23!42;UBERON:0005057!6.34e-19!51;UBERON:0002405!1.14e-17!70;UBERON:0003929!2.68e-15!55;UBERON:0005911!1.99e-14!69;UBERON:0002368!1.04e-13!60;UBERON:0003081!3.75e-13!88;UBERON:0002530!2.31e-12!65;UBERON:0000490!4.05e-12!66;UBERON:0001041!4.87e-11!92;UBERON:0000949!8.55e-11!72;UBERON:0000077!3.01e-10!97;UBERON:0000064!6.79e-09!99;UBERON:0004921!8.40e-08!126;UBERON:0004185!8.40e-08!126;UBERON:0001007!1.31e-07!128;UBERON:0001555!1.31e-07!128;UBERON:0007026!1.31e-07!128;UBERON:0004119!2.01e-07!130;UBERON:0000925!2.01e-07!130;UBERON:0006595!2.01e-07!130;UBERON:0000153!2.07e-07!94;UBERON:0007811!2.25e-07!86;UBERON:0003104!2.50e-07!131;UBERON:0009142!2.50e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.24e-20,23;UBERON:0000974,1.24e-20,23;UBERON:0004807,1.24e-20,23;UBERON:0005058,1.24e-20,23;UBERON:0003351,1.24e-20,23;UBERON:0009113,1.24e-20,23;UBERON:0003295,1.24e-20,23;UBERON:0009722,1.24e-20,23;UBERON:0005562,1.24e-20,23;UBERON:0007690,1.24e-20,23;UBERON:0006562,9.00e-20,24;UBERON:0003408,9.00e-20,24;UBERON:0001557,9.00e-20,24;UBERON:0001042,9.00e-20,24;UBERON:0008814,9.00e-20,24;UBERON:0009145,9.00e-20,24;UBERON:0000072,1.43e-17,27;UBERON:0004177,2.36e-16,29;UBERON:0005057,2.36e-16,29;UBERON:0000077,1.56e-13,35;UBERON:0002384,2.04e-13,46;UBERON:0007811,3.74e-13,36;UBERON:0000065,1.57e-11,41;UBERON:0001004,2.98e-11,42;UBERON:0000153,5.49e-11,43;UBERON:0002390,1.72e-10,45;UBERON:0003061,1.72e-10,45;UBERON:0002193,8.01e-10,48;UBERON:0002405,8.01e-10,48;UBERON:0003929,1.52e-08,55;UBERON:0002368,8.24e-08,60;UBERON:0002530,3.45e-07,65;UBERON:0000490,4.48e-07,66;UBERON:0005911,9.37e-07,69|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,2.956563165185,2.10658073689794,3.76679530096111,1.51567102091139,4.10881751834894,4.02133851127388,0.333109761815663,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0.198681354781265,0.721172697119813,0.738447635872886,0.807731599585181,0.381034033274999,0.604957110821043,0.292373642219257,1.34696578296461,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@uc007ytl.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=291 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_uc007ytl.1_5end | |||
|cluster_id=chr16:23175296..23175310,+ | |||
|description=CAGE_peak_3_at_uc007ytl.1_5end | |||
|id=chr16:23175296..23175310,+ | |||
|ontology_enrichment_celltype=CL:0000624!1.09e-26!8;CL:0000791!1.41e-23!9;CL:0000789!1.41e-23!9;CL:0002420!1.41e-23!9;CL:0002419!1.41e-23!9;CL:0000790!1.41e-23!9;CL:0000893!1.86e-20!6;CL:0002489!1.86e-20!6;CL:0000898!1.86e-20!6;CL:0000809!1.86e-20!6;CL:0000810!1.86e-20!6;CL:0000895!1.86e-20!6;CL:0000808!1.86e-20!6;CL:0000894!1.86e-20!6;CL:0000806!1.86e-20!6;CL:0000807!1.86e-20!6;CL:0000805!1.86e-20!6;CL:0002425!1.86e-20!6;CL:0002436!1.86e-20!6;CL:0002427!1.86e-20!6;CL:0002428!1.86e-20!6;CL:0002429!1.86e-20!6;CL:0002433!1.86e-20!6;CL:0002431!1.86e-20!6;CL:0002432!1.86e-20!6;CL:0000084!4.76e-19!11;CL:0000827!4.76e-19!11;CL:0000838!2.38e-17!12;CL:0000542!6.53e-16!13;CL:0000051!6.53e-16!13;CL:0000738!7.54e-12!17;CL:0002087!7.54e-12!17;CL:0002031!1.35e-11!25;CL:0000988!1.20e-08!32;CL:0002032!1.20e-08!32;CL:0000037!1.20e-08!32;CL:0000566!1.20e-08!32;CL:0000837!1.20e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.02e-77,8;CL:0000791,7.69e-69,9;CL:0000789,7.69e-69,9;CL:0002420,7.69e-69,9;CL:0002419,7.69e-69,9;CL:0000790,7.69e-69,9;CL:0000893,1.71e-58,6;CL:0002489,1.71e-58,6;CL:0000898,1.71e-58,6;CL:0000809,1.71e-58,6;CL:0000810,1.71e-58,6;CL:0000895,1.71e-58,6;CL:0000808,1.71e-58,6;CL:0000894,1.71e-58,6;CL:0000806,1.71e-58,6;CL:0000807,1.71e-58,6;CL:0000805,1.71e-58,6;CL:0002425,1.71e-58,6;CL:0002436,1.71e-58,6;CL:0002427,1.71e-58,6;CL:0002428,1.71e-58,6;CL:0002429,1.71e-58,6;CL:0002433,1.71e-58,6;CL:0002431,1.71e-58,6;CL:0002432,1.71e-58,6;CL:0000084,2.37e-56,11;CL:0000827,2.37e-56,11;CL:0000838,1.15e-51,12;CL:0000542,1.06e-47,13;CL:0000051,1.06e-47,13;CL:0000738,1.72e-36,17;CL:0002087,1.72e-36,17;CL:0002031,8.28e-25,25;CL:0000988,2.32e-19,32;CL:0002032,2.32e-19,32;CL:0000037,2.32e-19,32;CL:0000837,2.32e-19,32;CL:0002320,2.04e-13,46;CL:0000134,2.04e-13,46;CL:0000219,2.15e-11,54;CL:0000815,7.19e-11,1;CL:0000792,7.19e-11,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.47e-37!23;UBERON:0000974!2.47e-37!23;UBERON:0004807!2.47e-37!23;UBERON:0005058!2.47e-37!23;UBERON:0003351!2.47e-37!23;UBERON:0009113!2.47e-37!23;UBERON:0003295!2.47e-37!23;UBERON:0009722!2.47e-37!23;UBERON:0005562!2.47e-37!23;UBERON:0007690!2.47e-37!23;UBERON:0006562!1.25e-35!24;UBERON:0003408!1.25e-35!24;UBERON:0001557!1.25e-35!24;UBERON:0001042!1.25e-35!24;UBERON:0008814!1.25e-35!24;UBERON:0009145!1.25e-35!24;UBERON:0004177!1.57e-32!29;UBERON:0000072!2.82e-31!27;UBERON:0000063!3.14e-26!35;UBERON:0002193!3.43e-25!48;UBERON:0002390!1.80e-24!45;UBERON:0003061!1.80e-24!45;UBERON:0000065!2.39e-24!41;UBERON:0001004!1.13e-23!42;UBERON:0005057!6.34e-19!51;UBERON:0002405!1.14e-17!70;UBERON:0003929!2.68e-15!55;UBERON:0005911!1.99e-14!69;UBERON:0002368!1.04e-13!60;UBERON:0003081!3.75e-13!88;UBERON:0002530!2.31e-12!65;UBERON:0000490!4.05e-12!66;UBERON:0001041!4.87e-11!92;UBERON:0000949!8.55e-11!72;UBERON:0000077!3.01e-10!97;UBERON:0000064!6.79e-09!99;UBERON:0004921!8.40e-08!126;UBERON:0004185!8.40e-08!126;UBERON:0001007!1.31e-07!128;UBERON:0001555!1.31e-07!128;UBERON:0007026!1.31e-07!128;UBERON:0004119!2.01e-07!130;UBERON:0000925!2.01e-07!130;UBERON:0006595!2.01e-07!130;UBERON:0000153!2.07e-07!94;UBERON:0007811!2.25e-07!86;UBERON:0003104!2.50e-07!131;UBERON:0009142!2.50e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.24e-20,23;UBERON:0000974,1.24e-20,23;UBERON:0004807,1.24e-20,23;UBERON:0005058,1.24e-20,23;UBERON:0003351,1.24e-20,23;UBERON:0009113,1.24e-20,23;UBERON:0003295,1.24e-20,23;UBERON:0009722,1.24e-20,23;UBERON:0005562,1.24e-20,23;UBERON:0007690,1.24e-20,23;UBERON:0006562,9.00e-20,24;UBERON:0003408,9.00e-20,24;UBERON:0001557,9.00e-20,24;UBERON:0001042,9.00e-20,24;UBERON:0008814,9.00e-20,24;UBERON:0009145,9.00e-20,24;UBERON:0000072,1.43e-17,27;UBERON:0004177,2.36e-16,29;UBERON:0005057,2.36e-16,29;UBERON:0000077,1.56e-13,35;UBERON:0002384,2.04e-13,46;UBERON:0007811,3.74e-13,36;UBERON:0000065,1.57e-11,41;UBERON:0001004,2.98e-11,42;UBERON:0000153,5.49e-11,43;UBERON:0002390,1.72e-10,45;UBERON:0003061,1.72e-10,45;UBERON:0002193,8.01e-10,48;UBERON:0002405,8.01e-10,48;UBERON:0003929,1.52e-08,55;UBERON:0002368,8.24e-08,60;UBERON:0002530,3.45e-07,65;UBERON:0000490,4.48e-07,66;UBERON:0005911,9.37e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,2.956563165185,2.10658073689794,3.76679530096111,1.51567102091139,4.10881751834894,4.02133851127388,0.333109761815663,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0,0,0.198681354781265,0.721172697119813,0.738447635872886,0.807731599585181,0.381034033274999,0.604957110821043,0.292373642219257,1.34696578296461,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@uc007ytl.1 | |||
}} |
Latest revision as of 05:28, 6 August 2015
Short description: | p3@uc007ytl.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc007ytl.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:291 |
Association with transcript: | -42bp_to_uc007ytl.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.24e-20 | 23 |
neck | 1.24e-20 | 23 |
respiratory system epithelium | 1.24e-20 | 23 |
hemolymphoid system gland | 1.24e-20 | 23 |
pharyngeal epithelium | 1.24e-20 | 23 |
thymic region | 1.24e-20 | 23 |
pharyngeal gland | 1.24e-20 | 23 |
entire pharyngeal arch endoderm | 1.24e-20 | 23 |
thymus primordium | 1.24e-20 | 23 |
early pharyngeal endoderm | 1.24e-20 | 23 |
pharynx | 9.00e-20 | 24 |
gland of gut | 9.00e-20 | 24 |
upper respiratory tract | 9.00e-20 | 24 |
chordate pharynx | 9.00e-20 | 24 |
pharyngeal arch system | 9.00e-20 | 24 |
pharyngeal region of foregut | 9.00e-20 | 24 |
segment of respiratory tract | 1.43e-17 | 27 |
hemopoietic organ | 2.36e-16 | 29 |
immune organ | 2.36e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 1.56e-13 | 35 |
connective tissue | 2.04e-13 | 46 |
craniocervical region | 3.74e-13 | 36 |
respiratory tract | 1.57e-11 | 41 |
respiratory system | 2.98e-11 | 42 |
anterior region of body | 5.49e-11 | 43 |
hematopoietic system | 1.72e-10 | 45 |
blood island | 1.72e-10 | 45 |
hemolymphoid system | 8.01e-10 | 48 |
immune system | 8.01e-10 | 48 |
gut epithelium | 1.52e-08 | 55 |
endocrine gland | 8.24e-08 | 60 |
gland | 3.45e-07 | 65 |
unilaminar epithelium | 4.48e-07 | 66 |
endo-epithelium | 9.37e-07 | 69 |