FFCP PHASE1:Mm9::chr18:38115198..38115277,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=225392|HGNC=|MCL_coexpression_id=1|UniProt=Q8BRJ3,Q8CFT0,E9Q2K0|association_with_transcript=0bp_to_ENSMUST00000070709,ENSMUST00000091932,ENSMUST00000169360,NM_153793,uc008erm.2,uc008ern.2_5end|description=CAGE_peak_1_at_Rell2_5end|id=chr18:38115198..38115277,+|ontology_enrichment_celltype=CL:0000117!2.63e-13!23;CL:0000337!2.63e-13!23;CL:0000540!1.31e-12!33;CL:0000047!1.31e-12!33;CL:0000031!1.31e-12!33;CL:0000404!1.31e-12!33;CL:0000221!4.47e-09!44;CL:0000133!4.47e-09!44;CL:0002319!7.33e-09!43;CL:0000393!6.90e-08!39;CL:0000211!6.90e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-17,23;CL:0000337,9.71e-17,23;CL:0000540,1.42e-14,33;CL:0000047,1.42e-14,33;CL:0000031,1.42e-14,33;CL:0000404,1.42e-14,33;CL:0000393,1.50e-10,39;CL:0000211,1.50e-10,39;CL:0000221,2.20e-09,44;CL:0000133,2.20e-09,44;CL:0002319,4.07e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.99e-25!73;UBERON:0005743!2.99e-25!73;UBERON:0000073!3.22e-25!75;UBERON:0001016!3.22e-25!75;UBERON:0000033!1.55e-23!63;UBERON:0001049!2.46e-23!52;UBERON:0005068!2.46e-23!52;UBERON:0006241!2.46e-23!52;UBERON:0007135!2.46e-23!52;UBERON:0002346!5.55e-23!71;UBERON:0003075!5.55e-23!71;UBERON:0007284!5.55e-23!71;UBERON:0004121!1.11e-22!102;UBERON:0000924!1.11e-22!102;UBERON:0006601!1.11e-22!102;UBERON:0000955!3.35e-22!50;UBERON:0006238!3.35e-22!50;UBERON:0002616!1.25e-21!49;UBERON:0003056!6.45e-19!49;UBERON:0007811!1.13e-18!86;UBERON:0003080!1.72e-18!40;UBERON:0002020!7.59e-18!34;UBERON:0002780!9.20e-18!39;UBERON:0001890!9.20e-18!39;UBERON:0006240!9.20e-18!39;UBERON:0000153!2.04e-15!94;UBERON:0002791!6.37e-15!29;UBERON:0003528!6.37e-15!29;UBERON:0001893!6.37e-15!29;UBERON:0000956!1.79e-10!21;UBERON:0001869!1.79e-10!21;UBERON:0000203!1.79e-10!21;UBERON:0002619!1.43e-08!17;UBERON:0002021!2.01e-07!10;UBERON:0000411!2.01e-07!10;UBERON:0001950!2.01e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-30,73;UBERON:0000073,3.94e-30,54;UBERON:0002346,1.81e-29,64;UBERON:0003075,1.81e-29,64;UBERON:0007284,1.81e-29,64;UBERON:0001016,8.70e-29,75;UBERON:0001049,2.66e-28,52;UBERON:0005068,2.66e-28,52;UBERON:0006241,2.66e-28,52;UBERON:0007135,2.66e-28,52;UBERON:0004121,1.23e-26,95;UBERON:0000924,1.23e-26,95;UBERON:0006601,1.23e-26,95;UBERON:0010371,1.05e-25,73;UBERON:0000955,3.93e-24,47;UBERON:0006238,3.93e-24,47;UBERON:0002616,2.03e-23,46;UBERON:0003056,2.75e-22,49;UBERON:0003080,6.22e-22,40;UBERON:0002020,9.40e-22,34;UBERON:0002780,5.25e-21,39;UBERON:0001890,5.25e-21,39;UBERON:0006240,5.25e-21,39;UBERON:0003528,5.41e-18,29;UBERON:0002791,5.41e-18,29;UBERON:0001893,5.41e-18,29;UBERON:0010314,1.88e-15,92;UBERON:0000956,2.76e-12,21;UBERON:0001869,2.76e-12,21;UBERON:0000203,2.76e-12,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,3.85e-09,10;UBERON:0000411,3.85e-09,10;UBERON:0001950,3.85e-09,10;UBERON:0002420,5.42e-07,8;UBERON:0007245,5.42e-07,8;UBERON:0010009,5.42e-07,8;UBERON:0010011,5.42e-07,8;UBERON:0000454,5.42e-07,8;UBERON:0003076,7.71e-07,12;UBERON:0003057,7.71e-07,12|phase1_expression=4.64431656603902,0.348975407639361,0,0,0,0,0,1.03298658753261,2.111830832275,1.40438715793196,3.76679530096111,1.91453181588807,2.39681021903688,1.83582845079895,0.333109761815663,0,0,1.41957974411207,0.548457734422955,1.27316895539409,23.3869047915442,0,0,0.47997726838022,0,0,0,0.861884930743556,0,0,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.878744730937887,0.194429899074283,0,0,1.34226084846189,1.45072428402269,2.68875039313971,0,0,0,38.8447604850428,51.8411159686592,32.9592329823213,0.677689064138264,0,0,0.988866362566974,2.1314403448383,0.299600110518405,1.15265491596466,13.0648911508682,18.4958135514416,11.9885227970288,96.2643817440818,89.0100220035003,20.4559634688973,18.7857123195743,15.6267193723704,99.1042928994498,110.066485429432,101.226705415864,38.3789097294864,45.3778712267952,35.4221091978597,109.439735608541,70.34532625396,73.6487554284225,66.5860603170489,70.9010970379533,62.0710154598251,0.984440513331393,0.906858721281426,0,0,0,0.539703191637817,0,0,5.19644354487482,0,0,0,4.08445917352373,0,0,0,0.216491041011214,0,0.505524445014783,3.65388415100992,1.03575153458869,0.890652834388949,0.867426633830679,0.913396434936424,0.230615497256059,0.60289056221049,0.587943535678524,0.502666365318702,0,0,2.65383165584962,0,0.220841518460394,0,0,72.9024184558752,59.4828647350212,0.255457055208591,0.239630249011841,0,0.127070227073065,120.281883442073,86.925114535539,89.9685161128109,98.5583895490208,110.213362109372,111.374391883924,98.3182054190611,0,0.373220911830279,0.252722758433675,2.73574412652416,0.260240885925407,0.229902104433473,1.26043490863744,3.0140963567143,5.3748834329549,6.14945857367279,5.24729657534481,10.0894314588216,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0.205782136407943,1.79130840136644,0,0,0,0,0,0,0,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,71.2882925632391,28.9161960785789,0.660837565967596,0,0.213288250535234,0.464473343720877,0.38660238396628,0.605050573870028,0.667134131534611,1.14135375667535,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.456994050438915,0,0,0,0.350679099451593,0,0.147610147979602,0,0.370191491765402,0.889357881261447,0.166845105716094,0,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,1.47529281905711,0.275936746304732,126.51386491038,126.705833206172,0,0,2.2085575359138,1.95219372148319,2.15423397732799,0.955875191810208,1.55959071857676,0.283076530788832,0.404810701674894,2.04579100537918,1.58115111178609,57.1951943230817,0.283880170416537,0.712262414669021,0.81443479676788,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.922305443831782,0,0,0.712994756769443,0,0,1.03135543248187,8.85142974959849,0.720244376125241,1.68166288917581,1.50035924522115,3.19212420556092,6.0645397984704,8.88564711251453,10.0473433207818,0.23467170806371,0.847328283455281,1.32317038832977,0.16488625294148,0.322928853391811,0,0.238744688006273,0.328281799490123,0.291480836629851,119.9701704008,1.02522528478712,0.206386867963223,0.370389054739423,0.565105371014073,0.956859594047176,0.228778173206523,1.01987057996313,0.979660166265606,1.65839968565309,0,0.790839983952838,0.406638934253697,0.540026704109006,0.627264888043406,0.218362563746178,0.674321731924103,0.165306911450672,0.785267825952089,0.129614973291793,3.72803587852155,1.69107881605257,0.897099276263873,0.992750942742586,0.194451188344048,0.904118764344118,0.506868376472335,1.40828686374905,0.13020438484395,1.25831213310853,3.8653459332161,2.30424005006292,0.316011120628178,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,0.39736270956253,0.721172697119813,0.738447635872886,0.504832249740738,0.609654453239999,0.604957110821043,0.779663045918019,0.481059208201647,0.233753804363138,1.13365191807606,1.77588762699252,0.448569283047378,0.671538465456314,0.386379188064381,0.187682475451182,0,0.643105137237198,1.00314420807073,93.748805874433,82.8585425712918,91.6632821503035,70.4598047609119,89.7458100899541,99.7119944554405,89.1029700305984,97.2693798964316,93.3473362507461,106.140863909123,0.726511433089237,1.99512436700516,4.43907374960749,5.10524105843418,5.65955539095552,8.45680138870065,7.77863547305653,6.59312183164461,6.09746498224449,6.06473308233114,5.83002389747551,7.1678009726709,6.9294715527713,8.83547103187196,8.15583659169708,4.76293691283074,7.76424983830532,9.06673336179414,8.24171801606613,7.21274708658547,9.25746981440622,7.45398385869217,6.43777712857767,5.23247099876383,5.8347815857505,6.93839784711747,7.86590283352922,4.73525480588117,6.3827933507555,8.41713407486608,8.77899134118889,7.88035859004508,5.72923460437565,6.66228417099654,5.98010494041538,23.9818154820428,5.14649538579898,7.52048689169044,4.78220830172108,3.52946270591225,3.2461496986859|short_description=p1@Rell2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225392 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BRJ3,Q8CFT0,E9Q2K0 | |||
|association_with_transcript=0bp_to_ENSMUST00000070709,ENSMUST00000091932,ENSMUST00000169360,NM_153793,uc008erm.2,uc008ern.2_5end | |||
|cluster_id=chr18:38115198..38115277,+ | |||
|description=CAGE_peak_1_at_Rell2_5end | |||
|id=chr18:38115198..38115277,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.63e-13!23;CL:0000337!2.63e-13!23;CL:0000540!1.31e-12!33;CL:0000047!1.31e-12!33;CL:0000031!1.31e-12!33;CL:0000404!1.31e-12!33;CL:0000221!4.47e-09!44;CL:0000133!4.47e-09!44;CL:0002319!7.33e-09!43;CL:0000393!6.90e-08!39;CL:0000211!6.90e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-17,23;CL:0000337,9.71e-17,23;CL:0000540,1.42e-14,33;CL:0000047,1.42e-14,33;CL:0000031,1.42e-14,33;CL:0000404,1.42e-14,33;CL:0000393,1.50e-10,39;CL:0000211,1.50e-10,39;CL:0000221,2.20e-09,44;CL:0000133,2.20e-09,44;CL:0002319,4.07e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.99e-25!73;UBERON:0005743!2.99e-25!73;UBERON:0000073!3.22e-25!75;UBERON:0001016!3.22e-25!75;UBERON:0000033!1.55e-23!63;UBERON:0001049!2.46e-23!52;UBERON:0005068!2.46e-23!52;UBERON:0006241!2.46e-23!52;UBERON:0007135!2.46e-23!52;UBERON:0002346!5.55e-23!71;UBERON:0003075!5.55e-23!71;UBERON:0007284!5.55e-23!71;UBERON:0004121!1.11e-22!102;UBERON:0000924!1.11e-22!102;UBERON:0006601!1.11e-22!102;UBERON:0000955!3.35e-22!50;UBERON:0006238!3.35e-22!50;UBERON:0002616!1.25e-21!49;UBERON:0003056!6.45e-19!49;UBERON:0007811!1.13e-18!86;UBERON:0003080!1.72e-18!40;UBERON:0002020!7.59e-18!34;UBERON:0002780!9.20e-18!39;UBERON:0001890!9.20e-18!39;UBERON:0006240!9.20e-18!39;UBERON:0000153!2.04e-15!94;UBERON:0002791!6.37e-15!29;UBERON:0003528!6.37e-15!29;UBERON:0001893!6.37e-15!29;UBERON:0000956!1.79e-10!21;UBERON:0001869!1.79e-10!21;UBERON:0000203!1.79e-10!21;UBERON:0002619!1.43e-08!17;UBERON:0002021!2.01e-07!10;UBERON:0000411!2.01e-07!10;UBERON:0001950!2.01e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-30,73;UBERON:0000073,3.94e-30,54;UBERON:0002346,1.81e-29,64;UBERON:0003075,1.81e-29,64;UBERON:0007284,1.81e-29,64;UBERON:0001016,8.70e-29,75;UBERON:0001049,2.66e-28,52;UBERON:0005068,2.66e-28,52;UBERON:0006241,2.66e-28,52;UBERON:0007135,2.66e-28,52;UBERON:0004121,1.23e-26,95;UBERON:0000924,1.23e-26,95;UBERON:0006601,1.23e-26,95;UBERON:0010371,1.05e-25,73;UBERON:0000955,3.93e-24,47;UBERON:0006238,3.93e-24,47;UBERON:0002616,2.03e-23,46;UBERON:0003056,2.75e-22,49;UBERON:0003080,6.22e-22,40;UBERON:0002020,9.40e-22,34;UBERON:0002780,5.25e-21,39;UBERON:0001890,5.25e-21,39;UBERON:0006240,5.25e-21,39;UBERON:0003528,5.41e-18,29;UBERON:0002791,5.41e-18,29;UBERON:0001893,5.41e-18,29;UBERON:0010314,1.88e-15,92;UBERON:0000956,2.76e-12,21;UBERON:0001869,2.76e-12,21;UBERON:0000203,2.76e-12,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,3.85e-09,10;UBERON:0000411,3.85e-09,10;UBERON:0001950,3.85e-09,10;UBERON:0002420,5.42e-07,8;UBERON:0007245,5.42e-07,8;UBERON:0010009,5.42e-07,8;UBERON:0010011,5.42e-07,8;UBERON:0000454,5.42e-07,8;UBERON:0003076,7.71e-07,12;UBERON:0003057,7.71e-07,12 | |||
|phase1_expression=4.64431656603902,0.348975407639361,0,0,0,0,0,1.03298658753261,2.111830832275,1.40438715793196,3.76679530096111,1.91453181588807,2.39681021903688,1.83582845079895,0.333109761815663,0,0,1.41957974411207,0.548457734422955,1.27316895539409,23.3869047915442,0,0,0.47997726838022,0,0,0,0.861884930743556,0,0,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.878744730937887,0.194429899074283,0,0,1.34226084846189,1.45072428402269,2.68875039313971,0,0,0,38.8447604850428,51.8411159686592,32.9592329823213,0.677689064138264,0,0,0.988866362566974,2.1314403448383,0.299600110518405,1.15265491596466,13.0648911508682,18.4958135514416,11.9885227970288,96.2643817440818,89.0100220035003,20.4559634688973,18.7857123195743,15.6267193723704,99.1042928994498,110.066485429432,101.226705415864,38.3789097294864,45.3778712267952,35.4221091978597,109.439735608541,70.34532625396,73.6487554284225,66.5860603170489,70.9010970379533,62.0710154598251,0.984440513331393,0.906858721281426,0,0,0,0.539703191637817,0,0,5.19644354487482,0,0,0,4.08445917352373,0,0,0,0.216491041011214,0,0.505524445014783,3.65388415100992,1.03575153458869,0.890652834388949,0.867426633830679,0.913396434936424,0.230615497256059,0.60289056221049,0.587943535678524,0.502666365318702,0,0,2.65383165584962,0,0.220841518460394,0,0,72.9024184558752,59.4828647350212,0.255457055208591,0.239630249011841,0,0.127070227073065,120.281883442073,86.925114535539,89.9685161128109,98.5583895490208,110.213362109372,111.374391883924,98.3182054190611,0,0.373220911830279,0.252722758433675,2.73574412652416,0.260240885925407,0.229902104433473,1.26043490863744,3.0140963567143,5.3748834329549,6.14945857367279,5.24729657534481,10.0894314588216,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0.205782136407943,1.79130840136644,0,0,0,0,0,0,0,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,71.2882925632391,28.9161960785789,0.660837565967596,0,0.213288250535234,0.464473343720877,0.38660238396628,0.605050573870028,0.667134131534611,1.14135375667535,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.456994050438915,0,0,0,0.350679099451593,0,0.147610147979602,0,0.370191491765402,0.889357881261447,0.166845105716094,0,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,1.47529281905711,0.275936746304732,126.51386491038,126.705833206172,0,0,2.2085575359138,1.95219372148319,2.15423397732799,0.955875191810208,1.55959071857676,0.283076530788832,0.404810701674894,2.04579100537918,1.58115111178609,57.1951943230817,0.283880170416537,0.712262414669021,0.81443479676788,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.922305443831782,0,0,0.712994756769443,0,0,1.03135543248187,8.85142974959849,0.720244376125241,1.68166288917581,1.50035924522115,3.19212420556092,6.0645397984704,8.88564711251453,10.0473433207818,0.23467170806371,0.847328283455281,1.32317038832977,0.16488625294148,0.322928853391811,0,0.238744688006273,0.328281799490123,0.291480836629851,119.9701704008,1.02522528478712,0.206386867963223,0.370389054739423,0.565105371014073,0.956859594047176,0.228778173206523,1.01987057996313,0.979660166265606,1.65839968565309,0,0.790839983952838,0.406638934253697,0.540026704109006,0.627264888043406,0.218362563746178,0.674321731924103,0.165306911450672,0.785267825952089,0.129614973291793,3.72803587852155,1.69107881605257,0.897099276263873,0.992750942742586,0.194451188344048,0.904118764344118,0.506868376472335,1.40828686374905,0.13020438484395,1.25831213310853,3.8653459332161,2.30424005006292,0.316011120628178,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,0.39736270956253,0.721172697119813,0.738447635872886,0.504832249740738,0.609654453239999,0.604957110821043,0.779663045918019,0.481059208201647,0.233753804363138,1.13365191807606,1.77588762699252,0.448569283047378,0.671538465456314,0.386379188064381,0.187682475451182,0,0.643105137237198,1.00314420807073,93.748805874433,82.8585425712918,91.6632821503035,70.4598047609119,89.7458100899541,99.7119944554405,89.1029700305984,97.2693798964316,93.3473362507461,106.140863909123,0.726511433089237,1.99512436700516,4.43907374960749,5.10524105843418,5.65955539095552,8.45680138870065,7.77863547305653,6.59312183164461,6.09746498224449,6.06473308233114,5.83002389747551,7.1678009726709,6.9294715527713,8.83547103187196,8.15583659169708,4.76293691283074,7.76424983830532,9.06673336179414,8.24171801606613,7.21274708658547,9.25746981440622,7.45398385869217,6.43777712857767,5.23247099876383,5.8347815857505,6.93839784711747,7.86590283352922,4.73525480588117,6.3827933507555,8.41713407486608,8.77899134118889,7.88035859004508,5.72923460437565,6.66228417099654,5.98010494041538,23.9818154820428,5.14649538579898,7.52048689169044,4.78220830172108,3.52946270591225,3.2461496986859 | |||
|short_description=p1@Rell2 | |||
}} |
Latest revision as of 06:09, 27 September 2015
Short description: | p1@Rell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000070709, ENSMUST00000091932, ENSMUST00000169360, NM_153793, uc008erm.2, uc008ern.2_5end |
EntrezGene: | Rell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.71e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.71e-17 | 23 |
neuron | 1.42e-14 | 33 |
neuronal stem cell | 1.42e-14 | 33 |
neuroblast | 1.42e-14 | 33 |
electrically signaling cell | 1.42e-14 | 33 |
electrically responsive cell | 1.50e-10 | 39 |
electrically active cell | 1.50e-10 | 39 |
ectodermal cell | 2.20e-09 | 44 |
neurectodermal cell | 2.20e-09 | 44 |
neural cell | 4.07e-09 | 43 |