FFCP PHASE1:Mm9::chr1:133904946..133904974,+: Difference between revisions
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{{FFCP|EntrezGene=13714|HGNC=|MCL_coexpression_id=345|UniProt=Q8C6Q0|association_with_transcript=72bp_to_ENSMUST00000146432_5end|description=CAGE_peak_7_at_Elk4_5end|id=chr1:133904946..133904974,+|ontology_enrichment_celltype=CL:0000838!5.14e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,1.87e-09,12;CL:0000084,7.01e-09,11;CL:0000827,7.01e-09,11;CL:0000542,2.06e-08,13;CL:0000051,2.06e-08,13;CL:0000791,4.37e-08,9;CL:0000789,4.37e-08,9;CL:0002420,4.37e-08,9;CL:0002419,4.37e-08,9;CL:0000790,4.37e-08,9;CL:0000624,3.10e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.97e-18!128;UBERON:0001555!1.97e-18!128;UBERON:0007026!1.97e-18!128;UBERON:0004119!9.41e-18!130;UBERON:0000925!9.41e-18!130;UBERON:0006595!9.41e-18!130;UBERON:0003929!1.41e-17!55;UBERON:0004921!1.62e-17!126;UBERON:0004185!1.62e-17!126;UBERON:0005911!5.32e-16!69;UBERON:0005057!8.04e-15!51;UBERON:0000490!1.20e-12!66;UBERON:0002405!1.46e-11!70;UBERON:0002368!7.04e-10!60;UBERON:0004177!1.49e-08!29;UBERON:0002530!2.88e-08!65;UBERON:0001041!3.34e-08!92;UBERON:0000344!5.98e-08!15;UBERON:0000949!8.08e-08!72;UBERON:0002370!1.01e-07!23;UBERON:0000974!1.01e-07!23;UBERON:0004807!1.01e-07!23;UBERON:0005058!1.01e-07!23;UBERON:0003351!1.01e-07!23;UBERON:0009113!1.01e-07!23;UBERON:0003295!1.01e-07!23;UBERON:0009722!1.01e-07!23;UBERON:0005562!1.01e-07!23;UBERON:0007690!1.01e-07!23;UBERON:0000077!2.43e-07!97;UBERON:0006562!3.34e-07!24;UBERON:0001557!3.34e-07!24;UBERON:0001042!3.34e-07!24;UBERON:0008814!3.34e-07!24;UBERON:0009145!3.34e-07!24;UBERON:0001242!3.79e-07!13;UBERON:0000060!3.79e-07!13;UBERON:0001262!3.79e-07!13;UBERON:0004786!3.79e-07!13;UBERON:0000160!3.84e-07!43;UBERON:0002107!4.41e-07!22;UBERON:0007499!4.41e-07!22;UBERON:0006925!4.41e-07!22;UBERON:0009497!4.41e-07!22;UBERON:0000015!4.41e-07!22;UBERON:0002423!4.41e-07!22;UBERON:0006235!4.41e-07!22;UBERON:0008835!4.41e-07!22;UBERON:0003894!4.41e-07!22;UBERON:0004161!4.41e-07!22;UBERON:0008836!4.41e-07!22;UBERON:0004923!4.60e-07!24;UBERON:0003408!7.24e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.24e-25,116;UBERON:0001555,6.24e-25,116;UBERON:0007026,6.24e-25,116;UBERON:0003929,4.46e-24,55;UBERON:0004119,4.61e-24,118;UBERON:0000925,4.61e-24,118;UBERON:0006595,4.61e-24,118;UBERON:0004921,1.25e-23,114;UBERON:0005911,5.83e-19,69;UBERON:0000490,5.40e-18,66;UBERON:0000160,9.40e-14,31;UBERON:0004177,1.29e-12,29;UBERON:0005057,1.29e-12,29;UBERON:0002370,3.28e-12,23;UBERON:0000974,3.28e-12,23;UBERON:0004807,3.28e-12,23;UBERON:0005058,3.28e-12,23;UBERON:0003351,3.28e-12,23;UBERON:0009113,3.28e-12,23;UBERON:0003295,3.28e-12,23;UBERON:0009722,3.28e-12,23;UBERON:0005562,3.28e-12,23;UBERON:0007690,3.28e-12,23;UBERON:0002368,3.42e-12,60;UBERON:0006562,2.16e-11,24;UBERON:0003408,2.16e-11,24;UBERON:0001557,2.16e-11,24;UBERON:0001042,2.16e-11,24;UBERON:0008814,2.16e-11,24;UBERON:0009145,2.16e-11,24;UBERON:0001041,3.41e-11,80;UBERON:0002193,2.17e-10,48;UBERON:0002405,2.17e-10,48;UBERON:0002530,2.93e-10,65;UBERON:0000072,3.06e-10,27;UBERON:0000077,6.39e-10,35;UBERON:0000344,7.31e-10,15;UBERON:0005409,1.02e-09,47;UBERON:0000949,1.18e-09,72;UBERON:0001242,1.04e-08,13;UBERON:0001262,1.04e-08,13;UBERON:0004786,1.04e-08,13;UBERON:0002390,1.08e-08,45;UBERON:0003061,1.08e-08,45;UBERON:0002107,1.90e-08,22;UBERON:0007499,1.90e-08,22;UBERON:0006925,1.90e-08,22;UBERON:0009497,1.90e-08,22;UBERON:0000015,1.90e-08,22;UBERON:0002423,1.90e-08,22;UBERON:0006235,1.90e-08,22;UBERON:0008835,1.90e-08,22;UBERON:0003894,1.90e-08,22;UBERON:0004161,1.90e-08,22;UBERON:0008836,1.90e-08,22;UBERON:0004923,4.84e-08,24;UBERON:0009854,7.83e-08,23;UBERON:0009856,7.83e-08,23;UBERON:0002365,9.14e-07,25;UBERON:0002330,9.14e-07,25|phase1_expression=0.320297694209588,5.93258192986914,3.63999391511629,14.8207463540347,13.023288978605,0.839396359559449,3.97141489012394,4.51931632045517,7.03943610758334,7.0219357896598,2.91070545983358,1.99430397488341,9.92964233600993,8.13009742496676,0.666219523631325,2.42970320867791,0,6.94016763788123,8.91243818437302,4.66828616977833,1.7008658030214,2.18440092641948,2.87319768052829,2.87986361028132,4.12936705920906,5.16808767703518,2.15380998079537,4.09395342103189,5.51067916423484,5.04060259519861,2.88249663851896,0.635030673459631,0.61506478758457,0,2.59966457776147,2.32728503501889,3.06254034393554,0,0,0,0.588231488031014,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,0,0.439372365468944,0.777719596297134,0.279972843250725,0,3.6912173332702,4.35217285206807,6.72187598284928,0.257259436035947,1.14613375975503,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0.151143120213571,2.31891590961342,2.58127163094416,4.0798280022465,4.85732872474035,9.09686984426737,14.3368603871147,2.52799956237153,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13714 | |||
|HGNC= | |||
|MCL_coexpression_id=345 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C6Q0 | |||
|association_with_transcript=72bp_to_ENSMUST00000146432_5end | |||
|cluster_id=chr1:133904946..133904974,+ | |||
|description=CAGE_peak_7_at_Elk4_5end | |||
|id=chr1:133904946..133904974,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.14e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.87e-09,12;CL:0000084,7.01e-09,11;CL:0000827,7.01e-09,11;CL:0000542,2.06e-08,13;CL:0000051,2.06e-08,13;CL:0000791,4.37e-08,9;CL:0000789,4.37e-08,9;CL:0002420,4.37e-08,9;CL:0002419,4.37e-08,9;CL:0000790,4.37e-08,9;CL:0000624,3.10e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.97e-18!128;UBERON:0001555!1.97e-18!128;UBERON:0007026!1.97e-18!128;UBERON:0004119!9.41e-18!130;UBERON:0000925!9.41e-18!130;UBERON:0006595!9.41e-18!130;UBERON:0003929!1.41e-17!55;UBERON:0004921!1.62e-17!126;UBERON:0004185!1.62e-17!126;UBERON:0005911!5.32e-16!69;UBERON:0005057!8.04e-15!51;UBERON:0000490!1.20e-12!66;UBERON:0002405!1.46e-11!70;UBERON:0002368!7.04e-10!60;UBERON:0004177!1.49e-08!29;UBERON:0002530!2.88e-08!65;UBERON:0001041!3.34e-08!92;UBERON:0000344!5.98e-08!15;UBERON:0000949!8.08e-08!72;UBERON:0002370!1.01e-07!23;UBERON:0000974!1.01e-07!23;UBERON:0004807!1.01e-07!23;UBERON:0005058!1.01e-07!23;UBERON:0003351!1.01e-07!23;UBERON:0009113!1.01e-07!23;UBERON:0003295!1.01e-07!23;UBERON:0009722!1.01e-07!23;UBERON:0005562!1.01e-07!23;UBERON:0007690!1.01e-07!23;UBERON:0000077!2.43e-07!97;UBERON:0006562!3.34e-07!24;UBERON:0001557!3.34e-07!24;UBERON:0001042!3.34e-07!24;UBERON:0008814!3.34e-07!24;UBERON:0009145!3.34e-07!24;UBERON:0001242!3.79e-07!13;UBERON:0000060!3.79e-07!13;UBERON:0001262!3.79e-07!13;UBERON:0004786!3.79e-07!13;UBERON:0000160!3.84e-07!43;UBERON:0002107!4.41e-07!22;UBERON:0007499!4.41e-07!22;UBERON:0006925!4.41e-07!22;UBERON:0009497!4.41e-07!22;UBERON:0000015!4.41e-07!22;UBERON:0002423!4.41e-07!22;UBERON:0006235!4.41e-07!22;UBERON:0008835!4.41e-07!22;UBERON:0003894!4.41e-07!22;UBERON:0004161!4.41e-07!22;UBERON:0008836!4.41e-07!22;UBERON:0004923!4.60e-07!24;UBERON:0003408!7.24e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.24e-25,116;UBERON:0001555,6.24e-25,116;UBERON:0007026,6.24e-25,116;UBERON:0003929,4.46e-24,55;UBERON:0004119,4.61e-24,118;UBERON:0000925,4.61e-24,118;UBERON:0006595,4.61e-24,118;UBERON:0004921,1.25e-23,114;UBERON:0005911,5.83e-19,69;UBERON:0000490,5.40e-18,66;UBERON:0000160,9.40e-14,31;UBERON:0004177,1.29e-12,29;UBERON:0005057,1.29e-12,29;UBERON:0002370,3.28e-12,23;UBERON:0000974,3.28e-12,23;UBERON:0004807,3.28e-12,23;UBERON:0005058,3.28e-12,23;UBERON:0003351,3.28e-12,23;UBERON:0009113,3.28e-12,23;UBERON:0003295,3.28e-12,23;UBERON:0009722,3.28e-12,23;UBERON:0005562,3.28e-12,23;UBERON:0007690,3.28e-12,23;UBERON:0002368,3.42e-12,60;UBERON:0006562,2.16e-11,24;UBERON:0003408,2.16e-11,24;UBERON:0001557,2.16e-11,24;UBERON:0001042,2.16e-11,24;UBERON:0008814,2.16e-11,24;UBERON:0009145,2.16e-11,24;UBERON:0001041,3.41e-11,80;UBERON:0002193,2.17e-10,48;UBERON:0002405,2.17e-10,48;UBERON:0002530,2.93e-10,65;UBERON:0000072,3.06e-10,27;UBERON:0000077,6.39e-10,35;UBERON:0000344,7.31e-10,15;UBERON:0005409,1.02e-09,47;UBERON:0000949,1.18e-09,72;UBERON:0001242,1.04e-08,13;UBERON:0001262,1.04e-08,13;UBERON:0004786,1.04e-08,13;UBERON:0002390,1.08e-08,45;UBERON:0003061,1.08e-08,45;UBERON:0002107,1.90e-08,22;UBERON:0007499,1.90e-08,22;UBERON:0006925,1.90e-08,22;UBERON:0009497,1.90e-08,22;UBERON:0000015,1.90e-08,22;UBERON:0002423,1.90e-08,22;UBERON:0006235,1.90e-08,22;UBERON:0008835,1.90e-08,22;UBERON:0003894,1.90e-08,22;UBERON:0004161,1.90e-08,22;UBERON:0008836,1.90e-08,22;UBERON:0004923,4.84e-08,24;UBERON:0009854,7.83e-08,23;UBERON:0009856,7.83e-08,23;UBERON:0002365,9.14e-07,25;UBERON:0002330,9.14e-07,25 | |||
|phase1_expression=0.320297694209588,5.93258192986914,3.63999391511629,14.8207463540347,13.023288978605,0.839396359559449,3.97141489012394,4.51931632045517,7.03943610758334,7.0219357896598,2.91070545983358,1.99430397488341,9.92964233600993,8.13009742496676,0.666219523631325,2.42970320867791,0,6.94016763788123,8.91243818437302,4.66828616977833,1.7008658030214,2.18440092641948,2.87319768052829,2.87986361028132,4.12936705920906,5.16808767703518,2.15380998079537,4.09395342103189,5.51067916423484,5.04060259519861,2.88249663851896,0.635030673459631,0.61506478758457,0,2.59966457776147,2.32728503501889,3.06254034393554,0,0,0,0.588231488031014,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,0,0.439372365468944,0.777719596297134,0.279972843250725,0,3.6912173332702,4.35217285206807,6.72187598284928,0.257259436035947,1.14613375975503,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,0.207379224616955,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0.151143120213571,2.31891590961342,2.58127163094416,4.0798280022465,4.85732872474035,9.09686984426737,14.3368603871147,2.52799956237153,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,1.52015919285059,0,5.25245846707676,11.6522047641227,0.742210695324124,0,0.304465478312141,0.691846491768175,0.301445281105245,0.823120949949934,0.251333182659351,0.494389935468748,0.578397427679647,0,0.161766849947409,0.662524555381181,1.45462575940567,0,0,0,6.38642638021478,2.15667224110656,1.79970819298022,1.01656181658452,0,0,0,0.173824320192276,0,0,0,0.509196819251581,1.61729061793121,3.0326731012041,0,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0,0.0937017245597288,0,0,0.756424320671277,0.175951124163949,0,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0.257347907114715,0.568326998791185,0.621377317606506,0.469052119962192,0.180062061461015,0,0.590292695242212,0,0.465067889500816,0.268273401399619,0.233530684734339,0,0.656669856316381,0.243206428637567,0.146199987425332,0.658650345873152,0.268412837520744,0,0.308713837137853,10.5734010554815,9.25576983322405,0,0.928946687441754,0.38660238396628,2.21851877085677,2.66853652613844,2.47293313946327,4.74529061544512,2.79988223030818,3.01602250560323,2.78539060857611,1.75467678407208,4.49409704327111,5.83572734661674,3.78368419183298,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.775809948670503,0.561086559122548,1.70738650235495,2.50937251565324,1.72698600625512,2.71473760627961,6.22550516883013,0.166845105716094,0.393117990226406,0.899448449539415,0.405720242777006,1.92941727801933,1.52775511068852,4.60313819921297,1.45921704097532,2.74561413188081,1.43768206527355,1.86070473834252,4.05648975048929,3.03094653536534,6.81710171383266,11.5786445127208,1.29327233116623,0.189491411770485,0.651859905768103,0.339490171550376,0.469380496577004,1.00503754465089,0.714130922658041,0.585400943573396,0.630540576424764,0.44292937929755,0.159454768657487,2.29408640602033,1.20879487306127,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.567760340833074,0.534196811001766,0.488660878060728,0.659880491890142,1.32745138339963,1.45668381692989,0,0.565815239267694,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0.632073515871632,0,0,1.70219802876894,0.18006109403131,0,0.643011105094777,0.886701168211368,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0,0.441056796109924,1.48397627647332,1.45317984026315,0.904693873922338,0.716234064018819,0.492422699235184,5.24665505933731,0,1.02522528478712,1.03193433981611,0.740778109478847,2.26042148405629,1.77702496037333,1.14389086603261,2.20971958992012,3.77868921273877,4.00779924032829,0,0,0.406638934253697,0.432021363287205,0.418176592028937,1.09181281873089,0.539457385539283,0.495920734352016,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.651021924219751,0.943734099831398,0.241584120826006,0.576060012515731,7.2682557744481,1.82452693761148,1.74608627180206,3.89762468933385,6.08690765269437,2.98022032171897,3.24527713703916,4.87375439676105,4.4425237977185,4.64861520595499,4.7388307014315,5.65255708290564,4.9068039236568,9.58390597888865,0.226730383615211,0.221985953374065,0.0897138566094757,0.335769232728157,0.386379188064381,0.563047426353546,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.486213434136588,0.419226325255965,0.735374033800057,1.33348036680969,1.44224540067226,0,0.758091635291392,0.25347929989024,0.943131706930381,0.655490552289177,0.384150914429216,0.804096565378586,0.952587382566147,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0.3428692523854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| |||
|short_description=p7@Elk4 | |||
}} |
Latest revision as of 08:51, 26 September 2015
Short description: | p7@Elk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Elk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:345 |
Association with transcript: | 72bp_to_ENSMUST00000146432_5end |
EntrezGene: | Elk4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.87e-09 | 12 |
T cell | 7.01e-09 | 11 |
pro-T cell | 7.01e-09 | 11 |
lymphocyte | 2.06e-08 | 13 |
common lymphoid progenitor | 2.06e-08 | 13 |
mature alpha-beta T cell | 4.37e-08 | 9 |
alpha-beta T cell | 4.37e-08 | 9 |
immature T cell | 4.37e-08 | 9 |
mature T cell | 4.37e-08 | 9 |
immature alpha-beta T cell | 4.37e-08 | 9 |
CD4-positive, alpha-beta T cell | 3.10e-07 | 8 |