FFCP PHASE1:Hg19::chr6:37140215..37140268,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5292 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8986 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000468243,uc011dtw.1_5end | |||
|cluster_id=chr6:37140215..37140268,+ | |||
|description=CAGE_peak_3_at_PIM1_5end | |||
|id=chr6:37140215..37140268,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.80e-29!172;CL:0000566!8.80e-29!172;CL:0002032!5.41e-27!165;CL:0000837!5.41e-27!165;CL:0000988!3.71e-25!182;CL:0000763!1.90e-17!112;CL:0000049!1.90e-17!112;CL:0000738!2.61e-17!140;CL:0000791!5.57e-16!18;CL:0000789!5.57e-16!18;CL:0002420!5.57e-16!18;CL:0002419!5.57e-16!18;CL:0000790!5.57e-16!18;CL:0002087!9.71e-16!119;CL:0002031!5.37e-15!124;CL:0000084!9.12e-14!25;CL:0000827!9.12e-14!25;CL:0000625!7.02e-11!11;CL:0000838!1.80e-09!52;CL:0000542!4.29e-09!53;CL:0000051!4.29e-09!53;CL:0000766!3.65e-08!76;CL:0002057!2.15e-07!42;CL:0000839!3.43e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.31e-29;18!CL:0000789;2.31e-29;18!CL:0002419;2.31e-29;18!CL:0000084;6.87e-22;25!CL:0000625;1.76e-19;11!CL:0000624;3.11e-10;6!CL:0000763;1.33e-07;100!CL:0000988;1.53e-07;177!CL:0000542;3.77e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.14e-34,168;CL:0002032,3.77e-33,161;CL:0000837,3.77e-33,161;CL:0000988,6.75e-32,177;CL:0000791,2.47e-29,18;CL:0000789,2.47e-29,18;CL:0002420,2.47e-29,18;CL:0002419,2.47e-29,18;CL:0000790,2.47e-29,18;CL:0000084,6.81e-22,25;CL:0000827,6.81e-22,25;CL:0000625,1.73e-19,11;CL:0000763,2.44e-19,108;CL:0000049,2.44e-19,108;CL:0000738,1.27e-16,136;CL:0002087,1.59e-15,115;CL:0002031,1.06e-14,120;CL:0000838,2.38e-13,52;CL:0000542,5.69e-13,53;CL:0000051,5.69e-13,53;CL:0000624,3.06e-10,6;CL:0000134,9.02e-08,354;CL:0002320,2.63e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-29;18!CL:0000051;3.77e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!1.05e-09!31;DOID:2531!1.40e-08!51;DOID:0060083!1.40e-08!51;DOID:1240!3.13e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.42e-18;31!DOID:1240;2.33e-12;39!DOID:1036;2.56e-11;8!DOID:2531;6.04e-10;51!DOID:0060083;6.04e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.85e-19,31;DOID:1240,1.29e-15,39;DOID:2531,6.67e-13,51;DOID:0060083,6.67e-13,51;DOID:1036,2.79e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.88e-12!115;UBERON:0002390!6.68e-11!102;UBERON:0003061!6.68e-11!102;UBERON:0002193!1.13e-09!112;UBERON:0000178!8.69e-09!15;UBERON:0000179!8.69e-09!15;UBERON:0000463!8.69e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.98e-17;15!UBERON:0000179;5.98e-17;15!UBERON:0000463;5.98e-17;15!UBERON:0002390;2.79e-10;32!UBERON:0002193;7.32e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.31e-17,15;UBERON:0000179,6.31e-17,15;UBERON:0000463,6.31e-17,15;UBERON:0002390,5.39e-12,98;UBERON:0003061,5.39e-12,98;UBERON:0002193,1.25e-11,108;UBERON:0004177,4.84e-08,7;UBERON:0005057,4.84e-08,7;UBERON:0002370,8.97e-07,4;UBERON:0005058,8.97e-07,4;UBERON:0009113,8.97e-07,4;UBERON:0003295,8.97e-07,4;UBERON:0005562,8.97e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8956850405167,5.75744097145819,1.23852898652861,0,0,0,0.0774672005803016,0.426507697462265,0.293600439334847,2.21598163412751,0.601633342410425,1.08505435357926,0.671746422719773,0.647787332037959,0.77272670290256,0.290796477559129,0.755751887377619,0.242584061187816,2.09186133215116,1.23350366406548,1.54853185447552,2.8769239232215,4.61089271752381,5.91205574721463,0,1.29096936716765,0,0,0.272906150057846,0.674170453335254,0,0.320929027076094,1.27867425159808,10.8850929061616,8.7764009353518,9.80316926225197,0.290209238628584,0,0,4.01997864410789,2.60741459210101,4.56096573880745,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,8.96813700770458,1.31692042387539,5.11445402295966,4.32311839024081,2.67281948699362,113.51963037027,7.49621213257258,8.04861269749047,5.84480185223734,34.7600625481742,2.65145316727353,3.1014745241707,4.33286182024025,52.2612584480755,50.202908158113,32.2298293023205,32.3329520809443,38.2540073170269,8.89719378972362,7.49114318651197,6.27213142829861,34.8992775508504,9.58051234004803,8.93431358254838,8.6026695286631,18.4767940307976,20.8346705234054,14.2567806667256,12.0460095262218,12.6706745042874,16.240994451805,16.1008531389931,19.7070719261051,3.22570789159572,5.88368430723716,3.76543450095277,0,0.670700859703636,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0.348259474598534,0.26591592103773,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0,0.141775097242386,0,0,0,0,1.76096868026452,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,2.01753259188349,4.3346767244424,5.60631694634745,5.13372145118993,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,3.23571301227925,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.9749358226032,41.3068012619343,0,0,0,0.721287081534056,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.03558180854457,0.43050537267123,0,0,0,57.3415798432351,64.2295253999595,62.0915434019837,18.8203102611653,12.752230465672,42.7992385387193,50.2229236631447,47.5875105776562,0.320472213382419,0,0,0,0,0.0711418433484141,0,9.77938920020801,25.4702142276048,6.98522822988813,0,21.6213827147363,0,0,30.0761372508081,14.8976764465411,20.3946855381698,4.237793851012,0,0,0,0,0,0,0,6.15436994738562,6.76139196189958,2.33150377598474,1.4098700508785,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0,0,1.10513566212459,0,0,0.246169610922139,0,0.0898683511473268,0,0.511572370226872,0.295930216910801,19.1586473877552,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0.278847488557207,0.384751292518985,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0.533034776018635,0,5.02336820464079,4.48771541130422,11.279783030859,9.60706418156924,7.38414982693708,11.5749776961753,15.2579115821164,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,1.82454789215666,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.758238955541855,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,1.35784623083787,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0.916292769327325,0,0,0.248505071130865,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0.669514372325618,0.671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0.275078873194468,0.83088067605837,0,0,0.0607495566580247,0.335434687599266,0.157611414598396,0.681909645754975,0,0,0,0,0,0,0,0,0,0,40.4716127294241,0,0,0,5.30027555648885,0,0.66116300871345,0,0,0.640724475406168,2.51526888159466,0.414239055347196,1.48849806543585,0,0.121792598380896,0,0,0,0.306345576763462,0.655745261419609,0,0,0,0.1251909307065,0,0.443716206147409,0.496771223531068,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,2.79982354196902,0,0,0,0,0.279759015438889,0,0,0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| |||
|short_description=p3@PIM1 | |||
}} |
Latest revision as of 14:22, 18 September 2015
Short description: | p3@PIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468243, uc011dtw.1_5end |
EntrezGene: | PIM1 |
HGNC: | 8986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.14e-34 | 168 |
hematopoietic oligopotent progenitor cell | 3.77e-33 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-33 | 161 |
hematopoietic cell | 6.75e-32 | 177 |
mature alpha-beta T cell | 2.47e-29 | 18 |
alpha-beta T cell | 2.47e-29 | 18 |
immature T cell | 2.47e-29 | 18 |
mature T cell | 2.47e-29 | 18 |
immature alpha-beta T cell | 2.47e-29 | 18 |
T cell | 6.81e-22 | 25 |
pro-T cell | 6.81e-22 | 25 |
CD8-positive, alpha-beta T cell | 1.73e-19 | 11 |
myeloid cell | 2.44e-19 | 108 |
common myeloid progenitor | 2.44e-19 | 108 |
leukocyte | 1.27e-16 | 136 |
nongranular leukocyte | 1.59e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.06e-14 | 120 |
lymphoid lineage restricted progenitor cell | 2.38e-13 | 52 |
lymphocyte | 5.69e-13 | 53 |
common lymphoid progenitor | 5.69e-13 | 53 |
CD4-positive, alpha-beta T cell | 3.06e-10 | 6 |
mesenchymal cell | 9.02e-08 | 354 |
connective tissue cell | 2.63e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 6.31e-17 | 15 |
haemolymphatic fluid | 6.31e-17 | 15 |
organism substance | 6.31e-17 | 15 |
hematopoietic system | 5.39e-12 | 98 |
blood island | 5.39e-12 | 98 |
hemolymphoid system | 1.25e-11 | 108 |
hemopoietic organ | 4.84e-08 | 7 |
immune organ | 4.84e-08 | 7 |
thymus | 8.97e-07 | 4 |
hemolymphoid system gland | 8.97e-07 | 4 |
thymic region | 8.97e-07 | 4 |
pharyngeal gland | 8.97e-07 | 4 |
thymus primordium | 8.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.85e-19 | 31 |
leukemia | 1.29e-15 | 39 |
hematologic cancer | 6.67e-13 | 51 |
immune system cancer | 6.67e-13 | 51 |
chronic leukemia | 2.79e-11 | 8 |