FFCP PHASE1:Mm9::chr2:165705099..165705145,-: Difference between revisions
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{{FFCP|EntrezGene=228880|HGNC=|MCL_coexpression_id=580|UniProt=|association_with_transcript=-76bp_to_uc008nyg.1_5end|description=CAGE_peak_3_at_Zmynd8_5end|id=chr2:165705099..165705145,-|ontology_enrichment_celltype=CL:0000117!8.26e-15!23;CL:0000337!8.26e-15!23;CL:0000540!9.15e-10!33;CL:0000047!9.15e-10!33;CL:0000031!9.15e-10!33;CL:0000404!9.15e-10!33;CL:0000221!8.89e-08!44;CL:0000133!8.89e-08!44;CL:0002319!1.24e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-23,23;CL:0000337,4.92e-23,23;CL:0000540,8.92e-15,33;CL:0000047,8.92e-15,33;CL:0000031,8.92e-15,33;CL:0000404,8.92e-15,33;CL:0000393,2.64e-11,39;CL:0000211,2.64e-11,39;CL:0002319,1.46e-09,43;CL:0000221,3.53e-09,44;CL:0000133,3.53e-09,44;CL:0002609,6.93e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.64e-23!63;UBERON:0001049!1.53e-22!52;UBERON:0005068!1.53e-22!52;UBERON:0006241!1.53e-22!52;UBERON:0007135!1.53e-22!52;UBERON:0001017!5.77e-22!73;UBERON:0005743!5.77e-22!73;UBERON:0000955!1.37e-21!50;UBERON:0006238!1.37e-21!50;UBERON:0002020!1.95e-21!34;UBERON:0002616!8.18e-21!49;UBERON:0000073!1.53e-20!75;UBERON:0001016!1.53e-20!75;UBERON:0002346!1.70e-20!71;UBERON:0003075!1.70e-20!71;UBERON:0007284!1.70e-20!71;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0003056!5.01e-19!49;UBERON:0002791!1.58e-18!29;UBERON:0003528!1.58e-18!29;UBERON:0001893!1.58e-18!29;UBERON:0003080!3.99e-17!40;UBERON:0002780!1.43e-16!39;UBERON:0001890!1.43e-16!39;UBERON:0006240!1.43e-16!39;UBERON:0000956!1.01e-13!21;UBERON:0001869!1.01e-13!21;UBERON:0000203!1.01e-13!21;UBERON:0000153!1.42e-12!94;UBERON:0007811!1.07e-11!86;UBERON:0002619!4.16e-11!17;UBERON:0002021!3.33e-08!10;UBERON:0000411!3.33e-08!10;UBERON:0001950!3.33e-08!10;UBERON:0000025!1.08e-07!114;UBERON:0004111!1.36e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.08e-32,54;UBERON:0002020,6.16e-32,34;UBERON:0001049,6.72e-30,52;UBERON:0005068,6.72e-30,52;UBERON:0006241,6.72e-30,52;UBERON:0007135,6.72e-30,52;UBERON:0001017,4.20e-28,73;UBERON:0003528,3.20e-27,29;UBERON:0002791,3.20e-27,29;UBERON:0001893,3.20e-27,29;UBERON:0001016,6.51e-27,75;UBERON:0002346,1.01e-26,64;UBERON:0003075,1.01e-26,64;UBERON:0007284,1.01e-26,64;UBERON:0000955,1.35e-25,47;UBERON:0006238,1.35e-25,47;UBERON:0002616,1.96e-24,46;UBERON:0003080,5.79e-22,40;UBERON:0004121,8.41e-22,95;UBERON:0000924,8.41e-22,95;UBERON:0006601,8.41e-22,95;UBERON:0010371,1.44e-21,73;UBERON:0002780,4.19e-21,39;UBERON:0001890,4.19e-21,39;UBERON:0006240,4.19e-21,39;UBERON:0003056,7.09e-21,49;UBERON:0000956,1.89e-19,21;UBERON:0001869,1.89e-19,21;UBERON:0000203,1.89e-19,21;UBERON:0002619,2.96e-15,17;UBERON:0010314,3.99e-14,92;UBERON:0002021,2.51e-12,10;UBERON:0000411,2.51e-12,10;UBERON:0001950,2.51e-12,10;UBERON:0002420,8.51e-09,8;UBERON:0007245,8.51e-09,8;UBERON:0010009,8.51e-09,8;UBERON:0010011,8.51e-09,8;UBERON:0000454,8.51e-09,8;UBERON:0003076,2.70e-08,12;UBERON:0003057,2.70e-08,12;UBERON:0000025,4.44e-07,114|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,7.40587370980846,5.07065122804943,0,0,0,0,0,0.299600110518405,0.768436610643109,6.947204024668,9.04539786822327,7.15104868594699,2.28520787523043,3.75476519617743,8.32937434661688,5.75072826109418,9.19218786610021,4.40463523997555,5.2351808614927,5.52983519722476,4.74790635828698,6.12967212136145,6.25096044668112,3.62937898701795,5.6276261003168,4.12555268997387,5.00868595305235,6.40672563595963,5.77838282058432,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,21.958559775866,23.8769245767339,0,0,0,0,4.49371918214468,7.32000964509802,7.413606774659,5.73620256634512,6.64860189058859,5.40248915854856,7.46309810111685,0.509196819251581,0.373220911830279,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.753524089178575,1.08858398642125,1.66547836370305,1.3118241438362,3.88055056108524,0,1.32374256117473,1.58356011747554,1.31517439456545,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,0.164167464079095,0.891756905004413,0.438599962275997,0.439100230582101,0.536825675041487,10.7247873767705,12.5543627102727,0,0,0,0.232236671860439,0.257734922644187,0,0.667134131534611,0,0,0.494096864172033,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0,0.569003702859245,0,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228880 | |||
|HGNC= | |||
|MCL_coexpression_id=580 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-76bp_to_uc008nyg.1_5end | |||
|cluster_id=chr2:165705099..165705145,- | |||
|description=CAGE_peak_3_at_Zmynd8_5end | |||
|id=chr2:165705099..165705145,- | |||
|ontology_enrichment_celltype=CL:0000117!8.26e-15!23;CL:0000337!8.26e-15!23;CL:0000540!9.15e-10!33;CL:0000047!9.15e-10!33;CL:0000031!9.15e-10!33;CL:0000404!9.15e-10!33;CL:0000221!8.89e-08!44;CL:0000133!8.89e-08!44;CL:0002319!1.24e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-23,23;CL:0000337,4.92e-23,23;CL:0000540,8.92e-15,33;CL:0000047,8.92e-15,33;CL:0000031,8.92e-15,33;CL:0000404,8.92e-15,33;CL:0000393,2.64e-11,39;CL:0000211,2.64e-11,39;CL:0002319,1.46e-09,43;CL:0000221,3.53e-09,44;CL:0000133,3.53e-09,44;CL:0002609,6.93e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.64e-23!63;UBERON:0001049!1.53e-22!52;UBERON:0005068!1.53e-22!52;UBERON:0006241!1.53e-22!52;UBERON:0007135!1.53e-22!52;UBERON:0001017!5.77e-22!73;UBERON:0005743!5.77e-22!73;UBERON:0000955!1.37e-21!50;UBERON:0006238!1.37e-21!50;UBERON:0002020!1.95e-21!34;UBERON:0002616!8.18e-21!49;UBERON:0000073!1.53e-20!75;UBERON:0001016!1.53e-20!75;UBERON:0002346!1.70e-20!71;UBERON:0003075!1.70e-20!71;UBERON:0007284!1.70e-20!71;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0003056!5.01e-19!49;UBERON:0002791!1.58e-18!29;UBERON:0003528!1.58e-18!29;UBERON:0001893!1.58e-18!29;UBERON:0003080!3.99e-17!40;UBERON:0002780!1.43e-16!39;UBERON:0001890!1.43e-16!39;UBERON:0006240!1.43e-16!39;UBERON:0000956!1.01e-13!21;UBERON:0001869!1.01e-13!21;UBERON:0000203!1.01e-13!21;UBERON:0000153!1.42e-12!94;UBERON:0007811!1.07e-11!86;UBERON:0002619!4.16e-11!17;UBERON:0002021!3.33e-08!10;UBERON:0000411!3.33e-08!10;UBERON:0001950!3.33e-08!10;UBERON:0000025!1.08e-07!114;UBERON:0004111!1.36e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.08e-32,54;UBERON:0002020,6.16e-32,34;UBERON:0001049,6.72e-30,52;UBERON:0005068,6.72e-30,52;UBERON:0006241,6.72e-30,52;UBERON:0007135,6.72e-30,52;UBERON:0001017,4.20e-28,73;UBERON:0003528,3.20e-27,29;UBERON:0002791,3.20e-27,29;UBERON:0001893,3.20e-27,29;UBERON:0001016,6.51e-27,75;UBERON:0002346,1.01e-26,64;UBERON:0003075,1.01e-26,64;UBERON:0007284,1.01e-26,64;UBERON:0000955,1.35e-25,47;UBERON:0006238,1.35e-25,47;UBERON:0002616,1.96e-24,46;UBERON:0003080,5.79e-22,40;UBERON:0004121,8.41e-22,95;UBERON:0000924,8.41e-22,95;UBERON:0006601,8.41e-22,95;UBERON:0010371,1.44e-21,73;UBERON:0002780,4.19e-21,39;UBERON:0001890,4.19e-21,39;UBERON:0006240,4.19e-21,39;UBERON:0003056,7.09e-21,49;UBERON:0000956,1.89e-19,21;UBERON:0001869,1.89e-19,21;UBERON:0000203,1.89e-19,21;UBERON:0002619,2.96e-15,17;UBERON:0010314,3.99e-14,92;UBERON:0002021,2.51e-12,10;UBERON:0000411,2.51e-12,10;UBERON:0001950,2.51e-12,10;UBERON:0002420,8.51e-09,8;UBERON:0007245,8.51e-09,8;UBERON:0010009,8.51e-09,8;UBERON:0010011,8.51e-09,8;UBERON:0000454,8.51e-09,8;UBERON:0003076,2.70e-08,12;UBERON:0003057,2.70e-08,12;UBERON:0000025,4.44e-07,114 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,7.40587370980846,5.07065122804943,0,0,0,0,0,0.299600110518405,0.768436610643109,6.947204024668,9.04539786822327,7.15104868594699,2.28520787523043,3.75476519617743,8.32937434661688,5.75072826109418,9.19218786610021,4.40463523997555,5.2351808614927,5.52983519722476,4.74790635828698,6.12967212136145,6.25096044668112,3.62937898701795,5.6276261003168,4.12555268997387,5.00868595305235,6.40672563595963,5.77838282058432,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,21.958559775866,23.8769245767339,0,0,0,0,4.49371918214468,7.32000964509802,7.413606774659,5.73620256634512,6.64860189058859,5.40248915854856,7.46309810111685,0.509196819251581,0.373220911830279,0.758168275301024,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.753524089178575,1.08858398642125,1.66547836370305,1.3118241438362,3.88055056108524,0,1.32374256117473,1.58356011747554,1.31517439456545,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,0.164167464079095,0.891756905004413,0.438599962275997,0.439100230582101,0.536825675041487,10.7247873767705,12.5543627102727,0,0,0,0.232236671860439,0.257734922644187,0,0.667134131534611,0,0,0.494096864172033,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0,0.569003702859245,0,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.788175720530955,1.10732344824387,0.637819074629948,0,0,0,0,0,0,0,4.81651769963376,3.6335622843583,0,0,0.631016438832513,0.390438744296638,0,0,1.11399337041197,0,0,0,0,10.6036034419196,0,0,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.968786560175433,0.542816324353403,0.238744688006273,0.164140899745061,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0.139951452323658,0,1.90934123603023,0.474503990371703,0,0.540026704109006,0,0,0.134864346384821,0.743881101528023,0,0.648074866458964,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0,0,12.4245405375755,8.74617949363636,8.02053718815155,5.32744865265431,4.11049511862385,10.5755145634558,8.10027000278167,10.3573876741571,8.60970577069989,10.8729665467882,0.207574695168353,0.798049746802062,1.19513524027894,0.972426868273176,0.838452650511929,1.83843508450014,1.55572709461131,1.44224540067226,1.28367683836726,1.01078884705519,0.50695859978048,1.13175804831646,1.591905626988,1.08842759088278,1.20614484806788,1.90517476513229,0.347652977834566,0.192909220463705,1.64834360321323,1.17759136107518,1.02860775715625,1.59728225543404,1.1921809497366,1.59881058295561,1.41164070622996,0.846146078916765,1.46342378298218,2.10455769150274,1.22223702461276,2.24456908663095,1.30498519936592,1.0835493061312,2.04615521584845,1.08455788830176,1.35034627686799,3.2475375131933,0.935726433781634,1.28922632428979,0.191288332068843,0.882365676478062,0 | |||
|short_description=p3@Zmynd8 | |||
}} |
Latest revision as of 04:17, 26 September 2015
Short description: | p3@Zmynd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zmynd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:580 |
Association with transcript: | -76bp_to_uc008nyg.1_5end |
EntrezGene: | Zmynd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.92e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.92e-23 | 23 |
neuron | 8.92e-15 | 33 |
neuronal stem cell | 8.92e-15 | 33 |
neuroblast | 8.92e-15 | 33 |
electrically signaling cell | 8.92e-15 | 33 |
electrically responsive cell | 2.64e-11 | 39 |
electrically active cell | 2.64e-11 | 39 |
neural cell | 1.46e-09 | 43 |
ectodermal cell | 3.53e-09 | 44 |
neurectodermal cell | 3.53e-09 | 44 |
neuron of cerebral cortex | 6.93e-08 | 6 |