FFCP PHASE1:Hg19::chr8:32506698..32506701,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:32506698..32506701,+ | |||
|description=CAGE_peak_at_chr8:32506698..32506701,+ | |||
|id=chr8:32506698..32506701,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.67e-21;3!CL:0000128;8.91e-10;7!CL:0000126;8.91e-10;7!CL:0000127;8.91e-10;7!CL:0000047;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.17e-21,3;CL:0000128,7.64e-10,7;CL:0000126,7.64e-10,7;CL:0000127,7.64e-10,7;CL:0002453,7.64e-10,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.06e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!5.26e-09!173;UBERON:0006601!5.26e-09!173;UBERON:0004121!6.00e-08!169;UBERON:0000033!1.01e-07!123;UBERON:0000153!1.75e-07!129;UBERON:0007811!1.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.08e-31;2!UBERON:0002757;1.08e-31;2!UBERON:0010134;1.08e-31;2!UBERON:0005408;1.08e-31;2!UBERON:0001899;1.08e-31;2!UBERON:0003296;2.17e-16;4!UBERON:0010133;2.17e-16;4!UBERON:0002784;2.17e-16;4!UBERON:0002780;6.78e-10;41!UBERON:0001890;6.78e-10;41!UBERON:0001894;8.91e-10;7!UBERON:0000956;9.94e-10;25!UBERON:0000203;9.94e-10;25!UBERON:0002791;3.90e-08;32!UBERON:0001869;3.90e-08;32!UBERON:0003528;1.78e-07;34!UBERON:0002020;1.78e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.33e-32,2;UBERON:0002757,7.33e-32,2;UBERON:0010134,7.33e-32,2;UBERON:0005408,7.33e-32,2;UBERON:0001899,7.33e-32,2;UBERON:0003296,1.79e-16,4;UBERON:0010133,1.79e-16,4;UBERON:0002784,1.79e-16,4;UBERON:0002780,6.03e-13,41;UBERON:0001890,6.03e-13,41;UBERON:0003080,6.03e-13,41;UBERON:0006240,6.03e-13,41;UBERON:0000073,5.12e-10,53;UBERON:0002616,5.12e-10,53;UBERON:0001894,7.99e-10,7;UBERON:0006222,7.99e-10,7;UBERON:0000956,1.01e-09,25;UBERON:0000203,1.01e-09,25;UBERON:0001049,1.78e-09,56;UBERON:0005068,1.78e-09,56;UBERON:0006241,1.78e-09,56;UBERON:0007135,1.78e-09,56;UBERON:0003056,1.09e-08,61;UBERON:0001017,1.31e-08,81;UBERON:0001016,1.02e-07,89;UBERON:0002791,1.03e-07,32;UBERON:0001869,1.03e-07,32;UBERON:0000955,1.16e-07,68;UBERON:0006238,1.16e-07,68;UBERON:0003528,2.77e-07,34;UBERON:0002020,2.77e-07,34;UBERON:0001893,2.77e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,1.77936752594749,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0.358779271377724,0,0,0.300091096084402,0,0.772921620136887,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0,0.355009592516614,0.10075209822764,0,0.57978255948989,1.63647672354501,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,1.14851441245126,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,2.81974010175699,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0.552567831062295,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0.689486746482929,0.874813840149763,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0.587954384486266,0.0870592065804026,0,0.51595809741485,0,0,0,0.0969890164884194,0.441280633457501,0,0,0,0,0,0,0,0,0,1.14536596165916,0,0,0,0,0,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0,0.511164065356265,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.624902039810533,0,0,0,0,0,0,0,1.10961172300523,0,0.251567901752575,0,0,0,0,0.295710299979268,0,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.516644938982447,0,0.184105950251841,0,0,0.127894371303652,0.431299245586727,0,0.218419276384028,0.169732529954025,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,1.00828678488687,0,0,0,0.196295437002051,0.11796972334774,0.366857197043358,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,2.14280734351315,1.3451348888753,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,1.0135880080915,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0.404234377916439,0,0,0,0,0,0.244209805832924,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:32506698..32506701,+ | |||
}} |
Latest revision as of 17:59, 31 July 2015
Short description: | p@chr8:32506698..32506701, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:32506698..32506701, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.17e-21 | 3 |
oligodendrocyte | 7.64e-10 | 7 |
macroglial cell | 7.64e-10 | 7 |
astrocyte | 7.64e-10 | 7 |
oligodendrocyte precursor cell | 7.64e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.33e-32 | 2 |
regional part of epithalamus | 7.33e-32 | 2 |
secretory circumventricular organ | 7.33e-32 | 2 |
circumventricular organ | 7.33e-32 | 2 |
epithalamus | 7.33e-32 | 2 |
gland of diencephalon | 1.79e-16 | 4 |
neuroendocrine gland | 1.79e-16 | 4 |
regional part of diencephalon | 1.79e-16 | 4 |
regional part of forebrain | 6.03e-13 | 41 |
forebrain | 6.03e-13 | 41 |
anterior neural tube | 6.03e-13 | 41 |
future forebrain | 6.03e-13 | 41 |
regional part of nervous system | 5.12e-10 | 53 |
regional part of brain | 5.12e-10 | 53 |
diencephalon | 7.99e-10 | 7 |
future diencephalon | 7.99e-10 | 7 |
cerebral cortex | 1.01e-09 | 25 |
pallium | 1.01e-09 | 25 |
neural tube | 1.78e-09 | 56 |
neural rod | 1.78e-09 | 56 |
future spinal cord | 1.78e-09 | 56 |
neural keel | 1.78e-09 | 56 |
pre-chordal neural plate | 1.09e-08 | 61 |
central nervous system | 1.31e-08 | 81 |
nervous system | 1.02e-07 | 89 |
regional part of telencephalon | 1.03e-07 | 32 |
cerebral hemisphere | 1.03e-07 | 32 |
brain | 1.16e-07 | 68 |
future brain | 1.16e-07 | 68 |
brain grey matter | 2.77e-07 | 34 |
gray matter | 2.77e-07 | 34 |
telencephalon | 2.77e-07 | 34 |