FFCP PHASE1:Hg19::chr9:118915956..118915981,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |||
|TSSclassifier=strong | |||
|UniProt=Q13219,Q7Z613,Q86YM8,Q8IWT8 | |||
|association_with_transcript=-89bp_to_NM_002581,uc004bjn.2_5end | |||
|cluster_id=chr9:118915956..118915981,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_8_at_PAPPA_5end | |||
|id=chr9:118915956..118915981,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-30!180;CL:0000187!2.83e-22!54;CL:0000680!6.03e-22!57;CL:0000056!6.03e-22!57;CL:0000355!6.03e-22!57;CL:0000183!1.91e-21!59;CL:0000057!1.80e-19!75;CL:0000393!6.73e-19!60;CL:0000211!6.73e-19!60;CL:0000192!1.27e-15!42;CL:0000514!1.27e-15!42;CL:0000359!1.81e-15!32;CL:0002620!1.86e-09!23;CL:0002494!2.56e-09!16;CL:0000222!2.25e-08!119;CL:0002539!6.76e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.72e-18;32!CL:0000187;4.39e-16;55!CL:0000192;9.75e-15;43!CL:0002494;2.88e-14;16!CL:0000393;3.12e-12;61!CL:0000211;3.12e-12;61!CL:0002539;2.79e-11;10!CL:0000569;4.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,3.19e-28,55;CL:0000680,3.77e-26,58;CL:0000056,3.77e-26,58;CL:0000355,3.77e-26,58;CL:0000393,2.74e-24,61;CL:0000211,2.74e-24,61;CL:0000192,1.53e-20,43;CL:0000514,1.53e-20,43;CL:0000359,5.54e-20,32;CL:0002494,9.80e-15,16;CL:0002539,1.05e-11,10;CL:0000222,2.50e-10,121;CL:0000057,5.20e-09,76;CL:0000569,1.79e-07,4;CL:0000011,1.79e-07,4;CL:0000048,2.78e-07,427;CL:0000723,6.72e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000355;3.55e-15;58!CL:0000514;9.75e-15;43!CL:0000011;4.07e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!2.35e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.26e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.96e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.35e-19!83;UBERON:0002329!1.35e-19!83;UBERON:0003077!1.35e-19!83;UBERON:0003059!1.35e-19!83;UBERON:0007282!1.35e-19!83;UBERON:0009618!1.35e-19!83;UBERON:0007285!1.35e-19!83;UBERON:0004290!1.64e-19!70;UBERON:0001134!3.16e-19!61;UBERON:0002036!3.16e-19!61;UBERON:0003082!3.16e-19!61;UBERON:0002385!5.18e-18!63;UBERON:0001015!5.18e-18!63;UBERON:0000383!5.18e-18!63;UBERON:0000486!2.13e-17!82;UBERON:0005256!2.78e-12!143;UBERON:0004872!4.48e-12!84;UBERON:0001637!5.07e-11!42;UBERON:0003509!5.07e-11!42;UBERON:0004572!5.07e-11!42;UBERON:0004573!2.00e-10!33;UBERON:0004571!2.00e-10!33;UBERON:0001009!1.80e-09!113;UBERON:0002049!2.05e-09!79;UBERON:0007798!2.05e-09!79;UBERON:0004535!2.09e-09!110;UBERON:0000475!1.39e-08!365;UBERON:0002100!1.83e-08!216;UBERON:0002200!2.27e-08!11;UBERON:0006876!2.27e-08!11;UBERON:0003914!1.17e-07!118;UBERON:0000490!1.38e-07!138;UBERON:0001981!2.65e-07!60;UBERON:0007500!2.65e-07!60;UBERON:0004537!2.65e-07!60;UBERON:0006965!2.65e-07!60;UBERON:0002199!5.50e-07!45;UBERON:0002416!5.50e-07!45;UBERON:0001135!5.54e-07!15;UBERON:0004237!6.76e-07!10;UBERON:0004695!6.76e-07!10;UBERON:0002111!6.76e-07!10;UBERON:0004178!6.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;2.79e-11;10!UBERON:0004695;2.79e-11;10!UBERON:0002111;2.79e-11;10!UBERON:0004178;2.79e-11;10!UBERON:0004573;3.40e-11;33!UBERON:0004571;3.40e-11;33!UBERON:0000948;6.34e-11;22!UBERON:0001135;1.36e-10;15!UBERON:0001637;3.64e-10;42!UBERON:0003509;3.64e-10;42!UBERON:0004572;3.64e-10;42!UBERON:0002385;6.48e-10;31!UBERON:0001015;6.48e-10;31!UBERON:0000383;6.48e-10;31!UBERON:0007100;3.64e-09;25!UBERON:0006876;1.75e-08;11!UBERON:0000992;2.28e-08;13!UBERON:0000947;2.78e-08;21!UBERON:0010191;2.78e-08;21!UBERON:0000488;2.25e-07;4!UBERON:0002119;6.85e-07;4!UBERON:0002203;7.03e-07;6!UBERON:0001768;7.03e-07;6!UBERON:0002200;7.03e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.04e-23,62;UBERON:0002036,1.04e-23,62;UBERON:0003082,1.04e-23,62;UBERON:0002385,1.32e-22,64;UBERON:0001015,1.32e-22,64;UBERON:0000383,1.32e-22,64;UBERON:0002329,8.11e-22,71;UBERON:0003059,8.11e-22,71;UBERON:0007282,8.11e-22,71;UBERON:0004290,8.11e-22,71;UBERON:0009618,8.11e-22,71;UBERON:0003077,2.39e-21,72;UBERON:0007285,2.39e-21,72;UBERON:0004872,6.68e-21,83;UBERON:0007524,6.82e-21,73;UBERON:0007503,8.46e-19,78;UBERON:0000486,4.02e-18,83;UBERON:0004535,7.97e-18,109;UBERON:0001009,5.53e-17,112;UBERON:0001637,2.46e-15,42;UBERON:0003509,2.46e-15,42;UBERON:0004572,2.46e-15,42;UBERON:0002049,8.44e-15,78;UBERON:0007798,8.44e-15,78;UBERON:0004573,8.51e-13,33;UBERON:0004571,8.51e-13,33;UBERON:0007500,7.50e-12,59;UBERON:0001981,7.50e-12,59;UBERON:0004537,7.50e-12,59;UBERON:0006965,7.50e-12,59;UBERON:0004237,1.05e-11,10;UBERON:0004695,1.05e-11,10;UBERON:0002111,1.05e-11,10;UBERON:0004178,1.05e-11,10;UBERON:0000948,1.15e-11,24;UBERON:0005498,1.15e-11,24;UBERON:0004140,1.15e-11,24;UBERON:0009881,1.15e-11,24;UBERON:0004141,1.15e-11,24;UBERON:0003084,1.15e-11,24;UBERON:0007005,1.15e-11,24;UBERON:0004139,1.15e-11,24;UBERON:0004291,1.15e-11,24;UBERON:0003914,5.16e-11,117;UBERON:0001135,6.05e-11,15;UBERON:0005256,7.64e-11,122;UBERON:0007100,6.59e-10,27;UBERON:0000055,2.65e-09,68;UBERON:0003124,3.36e-09,7;UBERON:0000490,7.21e-09,148;UBERON:0000992,1.56e-08,13;UBERON:0000947,1.66e-08,21;UBERON:0010191,1.66e-08,21;UBERON:0006876,2.24e-08,11;UBERON:0000926,1.32e-07,315;UBERON:0004120,1.32e-07,315;UBERON:0006603,1.32e-07,315;UBERON:0000488,2.04e-07,4;UBERON:0003104,2.65e-07,160;UBERON:0009142,2.65e-07,160;UBERON:0005631,6.17e-07,14;UBERON:0000158,6.17e-07,14;UBERON:0002119,6.98e-07,4;UBERON:0002203,9.64e-07,6;UBERON:0001768,9.64e-07,6;UBERON:0002200,9.64e-07,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,0,0,0,0,1.26343974685366,0.261185628199839,0,0,2.83973783769224,1.84636884759917,0.37129905888014,0.662794751455832,2.6893005858071,1.80808358407193,1.46062018077475,1.95173119516203,0,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,1.2786256184353,0,0,0.289693037921647,0.795285947051099,0,2.26883561193763,2.66075276955077,2.63504357079378,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39293562831038,4.237093786023,3.44203944898576,0.709336764396714,0.560677600142307,0,1.48000529050296,2.8008993185979,4.98429486657846,2.28846664358842,1.51357427644931,4.03323147135999,0.937285727335186,1.24864030732128,0,0.448346041655403,0.23486899728753,0.323745888736263,0.280901613404497,0.408308342509787,0,0.619954687054593,1.18800285728205,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.901428353439581,2.04177929688038,0.717558542755448,1.49490172172997,1.90738711043606,0.900273288253207,1.23663035086127,0.257640540045629,0.558350568994769,2.02531598689519,0.292311015483596,1.00973509697646,1.56484827691909,1.45481451136931,1.06502877754984,0.302256294682921,0.169560592310488,0.386521706326594,0,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0.252320850875628,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.236613600079688,0,0.482022059766964,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,2.057870056657,0,0,0,0,0,0,6.17644117074692,0.219500570817251,0,0,0,0.325808305310325,0,0,1.04337364477569,7.98379120803587,0,0,0,0,0,0,0,0,0,1.6798212819886,1.84307626415102,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0.857867961948885,0,0,0.65147236858747,0.355391948742546,0,1.20575750823834,0.871533458600294,1.59956785891291,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,3.95144636908534,4.46072471992904,2.52323864054295,3.39710103478868,0.300946099727719,0,0,0,0.368738337083406,0.868836144680828,0.195801157462741,0,0,0,0,0,3.32870879020994,2.41912234663744,0.744323423456331,0.920771839728375,0.280660094433074,1.28139149255701,0,1.12597744800525,0,0.616838775210622,0.887808626565635,1.47828880824856,1.03850885836724,1.74315567689939,0,0.200506470303285,0,1.14814448164607,0.546273504020151,0.262248829918848,0,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.256450125116389,1.64007322849853,0.650756789328606,16.2804798403401,0,0,0.574265537996172,0,0,1.54673149267395,0.616194468458578,1.5350367472613,0.551346289938122,3.00776685631166,2.46528379654188,1.87498580315422,0.0890320356467374,0,0,0,0,3.253918845081,10.7036197922418,3.485186350803,1.84820148105653,1.06461206063404,0,2.96518750566272,0.858749320451947,0.744316738719335,0.949138274156178,2.2875623270859,0,1.28381696410176,4.77304871888905,0.78494864019923,0.719489830333259,2.74537029736055,2.23843564456804,1.61745985258653,0,1.68503382495592,0,0,2.11300293513511,0.682499557039929,1.1312434556297,0,4.41092274836899,1.32687795048244,0.438450885253763,0,1.31178950409327,3.44947640836597,1.54911749049875,1.40847801266121,2.00775893085672,1.17898849215745,1.426684205925,0,0,1.64647446479951,0.379473173765715,1.04980416073495,0,0,0,14.5922891204008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0.895105873378046,0,0.0986434056369336,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,6.69902435437031,2.65633020865401,7.46248686426089,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.505492637027904,0,0,0,0,0.627865836814451,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.290268993867255,0.219267951258557,0.164230914106418,0.290967049465258,0.441280633457501,0,1.37041924646751,0,0,0,1.12222348352147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0,0.223171457441873,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,1.25501137532991,0.959575986597226,0,0,3.051222451857,0.542999601753713,0,0.653174720218818,0,0,1.19271615249795,0.339936274560377,0,0,0.129282956361551,0,1.53978154095896,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0.32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| |||
|short_description=p8@PAPPA | |||
}} |
Latest revision as of 17:48, 24 September 2015
Short description: | p8@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAPPA_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -89bp_to_NM_002581, uc004bjn.2_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219Q7Z613Q86YM8Q8IWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 3.19e-28 | 55 |
muscle precursor cell | 3.77e-26 | 58 |
myoblast | 3.77e-26 | 58 |
multi-potent skeletal muscle stem cell | 3.77e-26 | 58 |
electrically responsive cell | 2.74e-24 | 61 |
electrically active cell | 2.74e-24 | 61 |
smooth muscle cell | 1.53e-20 | 43 |
smooth muscle myoblast | 1.53e-20 | 43 |
vascular associated smooth muscle cell | 5.54e-20 | 32 |
cardiocyte | 9.80e-15 | 16 |
aortic smooth muscle cell | 1.05e-11 | 10 |
mesodermal cell | 2.50e-10 | 121 |
fibroblast | 5.20e-09 | 76 |
cardiac mesenchymal cell | 1.79e-07 | 4 |
migratory trunk neural crest cell | 1.79e-07 | 4 |
multi fate stem cell | 2.78e-07 | 427 |
somatic stem cell | 6.72e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.96e-09 | 14 |