FFCP PHASE1:Mm9::chr6:144157968..144157989,-: Difference between revisions
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{{FFCP|EntrezGene=20678|HGNC=|MCL_coexpression_id=76|UniProt=Q2TBA9|association_with_transcript=0bp_to_ENSMUST00000077160_5end|description=CAGE_peak_7_at_Sox5_5end|id=chr6:144157968..144157989,-|ontology_enrichment_celltype=CL:0000540!7.80e-12!33;CL:0000047!7.80e-12!33;CL:0000031!7.80e-12!33;CL:0000404!7.80e-12!33;CL:0000393!6.21e-09!39;CL:0000211!6.21e-09!39;CL:0000221!1.50e-08!44;CL:0000133!1.50e-08!44;CL:0002319!4.81e-08!43;CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23|ontology_enrichment_celltype_v019_2=CL:0002609,5.35e-12,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.98e-20!73;UBERON:0005743!7.98e-20!73;UBERON:0000073!5.26e-19!75;UBERON:0001016!5.26e-19!75;UBERON:0001049!3.07e-16!52;UBERON:0005068!3.07e-16!52;UBERON:0006241!3.07e-16!52;UBERON:0007135!3.07e-16!52;UBERON:0003080!5.48e-16!40;UBERON:0002780!7.46e-16!39;UBERON:0001890!7.46e-16!39;UBERON:0006240!7.46e-16!39;UBERON:0002020!5.25e-15!34;UBERON:0000955!8.10e-15!50;UBERON:0006238!8.10e-15!50;UBERON:0002616!2.19e-14!49;UBERON:0003056!9.45e-14!49;UBERON:0002791!1.14e-13!29;UBERON:0003528!1.14e-13!29;UBERON:0001893!1.14e-13!29;UBERON:0000033!4.28e-13!63;UBERON:0002346!4.18e-12!71;UBERON:0003075!4.18e-12!71;UBERON:0007284!4.18e-12!71;UBERON:0004121!2.53e-11!102;UBERON:0000924!2.53e-11!102;UBERON:0006601!2.53e-11!102;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0002619!8.18e-08!17;UBERON:0000025!1.33e-07!114;UBERON:0000153!3.93e-07!94;UBERON:0004111!4.82e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.45e-21,29;UBERON:0002791,1.45e-21,29;UBERON:0001893,1.45e-21,29;UBERON:0002780,9.46e-20,39;UBERON:0001890,9.46e-20,39;UBERON:0006240,9.46e-20,39;UBERON:0003080,4.38e-19,40;UBERON:0000956,1.19e-17,21;UBERON:0001869,1.19e-17,21;UBERON:0000203,1.19e-17,21;UBERON:0002020,1.67e-17,34;UBERON:0003056,3.00e-17,49;UBERON:0002616,1.04e-15,46;UBERON:0000955,3.13e-15,47;UBERON:0006238,3.13e-15,47;UBERON:0001049,3.97e-13,52;UBERON:0005068,3.97e-13,52;UBERON:0006241,3.97e-13,52;UBERON:0007135,3.97e-13,52;UBERON:0002346,8.61e-13,64;UBERON:0003075,8.61e-13,64;UBERON:0007284,8.61e-13,64;UBERON:0000073,2.13e-12,54;UBERON:0010371,2.32e-12,73;UBERON:0002102,4.40e-12,7;UBERON:0004710,4.40e-12,7;UBERON:0005419,4.40e-12,7;UBERON:0005417,4.40e-12,7;UBERON:0005729,4.40e-12,7;UBERON:0002619,1.31e-11,17;UBERON:0001017,1.83e-11,73;UBERON:0001016,5.86e-11,75;UBERON:0010708,2.12e-10,8;UBERON:0000026,2.69e-10,12;UBERON:0004708,2.69e-10,12;UBERON:0002101,2.69e-10,12;UBERON:0004357,2.69e-10,12;UBERON:0004347,2.69e-10,12;UBERON:0005732,2.69e-10,12;UBERON:0005733,2.69e-10,12;UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0010707,2.38e-09,13;UBERON:0010314,5.54e-09,92;UBERON:0000369,9.19e-09,5;UBERON:0002435,9.19e-09,5;UBERON:0000204,9.19e-09,5;UBERON:0010082,9.19e-09,5|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,13.894408049336,9.45041568321835,14.302097371894,0.856952953211411,0.883474163806454,5.63457676388789,4.98396449294829,2.75765635983006,0,0.510749352340751,0.307213066512487,2.50583946687368,1.64677758484337,1.56274011167028,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.711858403995515,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0.679971333707751,1.07940638327563,0,1.34408066129201,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29413479957927,0.441683036920787,1.45462575940567,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,1.83000241127451,2.01046963380583,1.91206752211504,2.55715457330331,0.20778804455956,1.62241263067758,0.101839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,1.3118241438362,1.55222022443409,1.5089759505299,4.72765200419548,4.04687585577082,1.31517439456545,2.78047249225598,2.089512999133,2.67516777330327,0.199034266818493,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,2.16099685996497,0,0,0.639864751605702,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0,0.505157755894224,0.358794827043824,0.964887042726734,0,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.94652465824877,0.780877488593277,2.58508077279359,3.34556317133573,0.891194696329576,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,3.24109969256358,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,1.15184314421485,0.304464949114599,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0,0.279902904647316,0,0,0.632671987162271,1.01659733563424,0.432021363287205,0.418176592028937,0,0.269728692769641,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,1.12950368523413,3.22227665555024,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.518936737920883,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.655490552289177,0.960377286073039,0.976402972245426,1.42888107384922,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.752875043322645,0.676916863133412,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.985044823755635,0,1.08455788830176,1.35034627686799,0.499621155875892,0.467863216890817,0.644613162144895,1.53030665655075,0.661774257358546,0.695603506861264|short_description=p7@Sox5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20678 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TBA9 | |||
|association_with_transcript=0bp_to_ENSMUST00000077160_5end | |||
|cluster_id=chr6:144157968..144157989,- | |||
|description=CAGE_peak_7_at_Sox5_5end | |||
|id=chr6:144157968..144157989,- | |||
|ontology_enrichment_celltype=CL:0000540!7.80e-12!33;CL:0000047!7.80e-12!33;CL:0000031!7.80e-12!33;CL:0000404!7.80e-12!33;CL:0000393!6.21e-09!39;CL:0000211!6.21e-09!39;CL:0000221!1.50e-08!44;CL:0000133!1.50e-08!44;CL:0002319!4.81e-08!43;CL:0000117!1.28e-07!23;CL:0000337!1.28e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.35e-12,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.98e-20!73;UBERON:0005743!7.98e-20!73;UBERON:0000073!5.26e-19!75;UBERON:0001016!5.26e-19!75;UBERON:0001049!3.07e-16!52;UBERON:0005068!3.07e-16!52;UBERON:0006241!3.07e-16!52;UBERON:0007135!3.07e-16!52;UBERON:0003080!5.48e-16!40;UBERON:0002780!7.46e-16!39;UBERON:0001890!7.46e-16!39;UBERON:0006240!7.46e-16!39;UBERON:0002020!5.25e-15!34;UBERON:0000955!8.10e-15!50;UBERON:0006238!8.10e-15!50;UBERON:0002616!2.19e-14!49;UBERON:0003056!9.45e-14!49;UBERON:0002791!1.14e-13!29;UBERON:0003528!1.14e-13!29;UBERON:0001893!1.14e-13!29;UBERON:0000033!4.28e-13!63;UBERON:0002346!4.18e-12!71;UBERON:0003075!4.18e-12!71;UBERON:0007284!4.18e-12!71;UBERON:0004121!2.53e-11!102;UBERON:0000924!2.53e-11!102;UBERON:0006601!2.53e-11!102;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0002619!8.18e-08!17;UBERON:0000025!1.33e-07!114;UBERON:0000153!3.93e-07!94;UBERON:0004111!4.82e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.45e-21,29;UBERON:0002791,1.45e-21,29;UBERON:0001893,1.45e-21,29;UBERON:0002780,9.46e-20,39;UBERON:0001890,9.46e-20,39;UBERON:0006240,9.46e-20,39;UBERON:0003080,4.38e-19,40;UBERON:0000956,1.19e-17,21;UBERON:0001869,1.19e-17,21;UBERON:0000203,1.19e-17,21;UBERON:0002020,1.67e-17,34;UBERON:0003056,3.00e-17,49;UBERON:0002616,1.04e-15,46;UBERON:0000955,3.13e-15,47;UBERON:0006238,3.13e-15,47;UBERON:0001049,3.97e-13,52;UBERON:0005068,3.97e-13,52;UBERON:0006241,3.97e-13,52;UBERON:0007135,3.97e-13,52;UBERON:0002346,8.61e-13,64;UBERON:0003075,8.61e-13,64;UBERON:0007284,8.61e-13,64;UBERON:0000073,2.13e-12,54;UBERON:0010371,2.32e-12,73;UBERON:0002102,4.40e-12,7;UBERON:0004710,4.40e-12,7;UBERON:0005419,4.40e-12,7;UBERON:0005417,4.40e-12,7;UBERON:0005729,4.40e-12,7;UBERON:0002619,1.31e-11,17;UBERON:0001017,1.83e-11,73;UBERON:0001016,5.86e-11,75;UBERON:0010708,2.12e-10,8;UBERON:0000026,2.69e-10,12;UBERON:0004708,2.69e-10,12;UBERON:0002101,2.69e-10,12;UBERON:0004357,2.69e-10,12;UBERON:0004347,2.69e-10,12;UBERON:0005732,2.69e-10,12;UBERON:0005733,2.69e-10,12;UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0010707,2.38e-09,13;UBERON:0010314,5.54e-09,92;UBERON:0000369,9.19e-09,5;UBERON:0002435,9.19e-09,5;UBERON:0000204,9.19e-09,5;UBERON:0010082,9.19e-09,5 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0.768436610643109,13.894408049336,9.45041568321835,14.302097371894,0.856952953211411,0.883474163806454,5.63457676388789,4.98396449294829,2.75765635983006,0,0.510749352340751,0.307213066512487,2.50583946687368,1.64677758484337,1.56274011167028,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.711858403995515,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0.679971333707751,1.07940638327563,0,1.34408066129201,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29413479957927,0.441683036920787,1.45462575940567,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,1.83000241127451,2.01046963380583,1.91206752211504,2.55715457330331,0.20778804455956,1.62241263067758,0.101839363850316,0.373220911830279,0,0,0.130120442962704,0,0,0,0.204109497453984,0.2562274405697,1.3118241438362,1.55222022443409,1.5089759505299,4.72765200419548,4.04687585577082,1.31517439456545,2.78047249225598,2.089512999133,2.67516777330327,0.199034266818493,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,0,0.196764231747404,0.308534225774757,0,0.536546802799238,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,2.16099685996497,0,0,0.639864751605702,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0,0.505157755894224,0.358794827043824,0.964887042726734,0,1.13694847062291,0.162964976442026,0.339490171550376,0.234690248288502,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.94652465824877,0.780877488593277,2.58508077279359,3.34556317133573,0.891194696329576,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,3.24109969256358,0.517434735131018,0.428674070063185,0.354680467284547,0.535106452806212,1.15184314421485,0.304464949114599,0,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0,0.279902904647316,0,0,0.632671987162271,1.01659733563424,0.432021363287205,0.418176592028937,0,0.269728692769641,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,1.12950368523413,3.22227665555024,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.518936737920883,0.399024873401031,2.04880326904961,1.45864030240976,1.46729213839588,0.367687016900028,1.11123363900808,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.655490552289177,0.960377286073039,0.976402972245426,1.42888107384922,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.752875043322645,0.676916863133412,1.28049581010941,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.985044823755635,0,1.08455788830176,1.35034627686799,0.499621155875892,0.467863216890817,0.644613162144895,1.53030665655075,0.661774257358546,0.695603506861264 | |||
|short_description=p7@Sox5 | |||
}} |
Latest revision as of 21:46, 26 September 2015
Short description: | p7@Sox5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sox5_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 0bp_to_ENSMUST00000077160_5end |
EntrezGene: | Sox5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.35e-12 | 6 |