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FFCP PHASE1:Mm9::chr11:118770953..118771053,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:118770953..118771053,- |short_description=p2@Rbfox3 |description=CAGE_peak_2_at_Rbfox3_5end |association_with_transcript=-67bp_to_ENSMUST00000017576,ENSMU...")
 
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{{FFCP
{{FFCP
|id=chr11:118770953..118771053,-
|DHSsupport=NA
|short_description=p2@Rbfox3
|DPIdataset=NA
|description=CAGE_peak_2_at_Rbfox3_5end
|association_with_transcript=-67bp_to_ENSMUST00000017576,ENSMUST00000106279,NM_001024931,NM_001039167,NM_001039168,uc007mpl.1,uc007mpm.1,uc007mpn.1,uc007mpo.1_5end
|EntrezGene=52897
|EntrezGene=52897
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q8BIF2,A2A4W7,D1GI07,Q8VI61
|UniProt=Q8BIF2,A2A4W7,D1GI07,Q8VI61
|association_with_transcript=-67bp_to_ENSMUST00000017576,ENSMUST00000106279,NM_001024931,NM_001039167,NM_001039168,uc007mpl.1,uc007mpm.1,uc007mpn.1,uc007mpo.1_5end
|cluster_id=chr11:118770953..118771053,-
|description=CAGE_peak_2_at_Rbfox3_5end
|id=chr11:118770953..118771053,-
|ontology_enrichment_celltype=CL:0000540!4.36e-14!33;CL:0000047!4.36e-14!33;CL:0000031!4.36e-14!33;CL:0000404!4.36e-14!33;CL:0000117!6.79e-14!23;CL:0000337!6.79e-14!23;CL:0000221!5.10e-12!44;CL:0000133!5.10e-12!44;CL:0002319!7.62e-12!43;CL:0000393!4.90e-10!39;CL:0000211!4.90e-10!39;CL:0000055!2.50e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-17,23;CL:0000337,1.34e-17,23;CL:0000540,9.20e-15,33;CL:0000047,9.20e-15,33;CL:0000031,9.20e-15,33;CL:0000404,9.20e-15,33;CL:0000393,6.14e-11,39;CL:0000211,6.14e-11,39;CL:0000221,6.50e-10,44;CL:0000133,6.50e-10,44;CL:0002319,1.09e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.10e-31!73;UBERON:0005743!8.10e-31!73;UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0002346!5.38e-27!71;UBERON:0003075!5.38e-27!71;UBERON:0007284!5.38e-27!71;UBERON:0004121!2.26e-25!102;UBERON:0000924!2.26e-25!102;UBERON:0006601!2.26e-25!102;UBERON:0001049!4.27e-25!52;UBERON:0005068!4.27e-25!52;UBERON:0006241!4.27e-25!52;UBERON:0007135!4.27e-25!52;UBERON:0000033!3.17e-24!63;UBERON:0000955!1.36e-23!50;UBERON:0006238!1.36e-23!50;UBERON:0002616!8.08e-23!49;UBERON:0003056!8.31e-21!49;UBERON:0002020!9.68e-20!34;UBERON:0003080!5.62e-19!40;UBERON:0002780!2.74e-18!39;UBERON:0001890!2.74e-18!39;UBERON:0006240!2.74e-18!39;UBERON:0002791!2.13e-16!29;UBERON:0003528!2.13e-16!29;UBERON:0001893!2.13e-16!29;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0007811!3.99e-11!86;UBERON:0000153!9.01e-10!94;UBERON:0002619!1.12e-09!17;UBERON:0002021!9.74e-09!10;UBERON:0000411!9.74e-09!10;UBERON:0001950!9.74e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.86e-30,73;UBERON:0000073,3.91e-30,54;UBERON:0002346,1.68e-29,64;UBERON:0003075,1.68e-29,64;UBERON:0007284,1.68e-29,64;UBERON:0001016,4.88e-29,75;UBERON:0001049,1.57e-28,52;UBERON:0005068,1.57e-28,52;UBERON:0006241,1.57e-28,52;UBERON:0007135,1.57e-28,52;UBERON:0004121,2.35e-25,95;UBERON:0000924,2.35e-25,95;UBERON:0006601,2.35e-25,95;UBERON:0010371,3.66e-25,73;UBERON:0002020,6.33e-25,34;UBERON:0000955,3.39e-24,47;UBERON:0006238,3.39e-24,47;UBERON:0002616,3.02e-23,46;UBERON:0003056,2.48e-22,49;UBERON:0003080,2.60e-21,40;UBERON:0003528,1.40e-20,29;UBERON:0002791,1.40e-20,29;UBERON:0001893,1.40e-20,29;UBERON:0002780,1.91e-20,39;UBERON:0001890,1.91e-20,39;UBERON:0006240,1.91e-20,39;UBERON:0010314,8.81e-16,92;UBERON:0000956,1.25e-14,21;UBERON:0001869,1.25e-14,21;UBERON:0000203,1.25e-14,21;UBERON:0002619,7.59e-12,17;UBERON:0002021,6.80e-11,10;UBERON:0000411,6.80e-11,10;UBERON:0001950,6.80e-11,10;UBERON:0003076,1.22e-07,12;UBERON:0003057,1.22e-07,12;UBERON:0002420,3.97e-07,8;UBERON:0007245,3.97e-07,8;UBERON:0010009,3.97e-07,8;UBERON:0010011,3.97e-07,8;UBERON:0000454,3.97e-07,8
|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1377056468904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,15.9830004079082,15.340738398889,15.2119536841483,0,0,0,0,0,0.599200221036809,0.768436610643109,9.95420278161385,13.095576018174,11.1472229516232,36.8489769880907,29.5963844875162,9.92175473641128,8.62609239164127,15.6267193723704,20.9220173898839,27.5804650264005,21.3513081226178,14.7712642257817,16.6507511356386,17.1901412283731,25.4056529091257,14.6318278608237,25.6701056265041,31.8198872311561,30.8946547334053,28.1463163196204,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.24711072210803,0,0,0,1.54927761754349,0,0,0,0,0,0,1.59857431606684,0,0.593768556259299,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,173.326231830836,223.68908287677,0,0,0,0,34.9012189813237,54.4425717354165,15.5811396619952,76.6565252047939,91.290418266928,26.5968697036237,49.9703090248694,0.81471491080253,1.8661045591514,0.505445516867349,2.10441855886474,0.260240885925407,0.689706313300419,1.80062129805349,3.31550599238573,2.4493139694478,1.92170580427275,2.99845518591132,7.24369438069244,2.58681591519411,2.64748512234947,0.351902248327898,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,64.7693041577512,22.3303008863047,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0,0.329397909448022,0,0.397912944082302,1.36474860983384,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,23.7614873181932,31.0610969469338,0,0,1.57754109708128,0.780877488593277,1.93881057959519,0.477937595905104,0.222798674082394,1.13230612315533,0.809621403349789,1.16902343164525,1.18586333383957,74.2252240934374,0.567760340833074,0,0.162886959353576,1.81467135269789,0,0.971122544619926,0.604647113929502,0,0,0.922305443831782,0,0.727067458955011,0,0,0,0,3.06395645178409,0.36012218806262,0.646793418913773,0.857348140126369,1.24138163549592,1.78368817602071,1.48094118541909,2.13125464380219,0,0,4.41056796109924,0,0,0,0,0,0,32.4494278518392,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.42323626988794,0.756037385752609,0.627264888043406,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,1.69107881605257,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,19.7053385912834,1.12609485270709,4.76194223094889,0.643105137237198,11.5361583928134,119.727390634818,91.6047220649282,89.9445956099853,71.490923854974,72.6187470956881,103.488963942389,75.6025200259622,73.8526773287722,70.2370733925517,79.7350880097803,1.03787347584177,3.19219898720825,3.24393850932855,2.43106717068294,2.51535795153579,3.12533964365024,2.889207461421,3.91466608753899,3.53011130550997,1.76888048234658,4.30914809813408,3.77252682772152,3.09016974650612,3.9695594491019,4.25022470271538,4.76293691283074,3.01299247456624,3.6652751888104,6.1812885120496,3.53277408322554,2.40008476669791,3.37204031702741,2.14592570952589,4.21504608233753,3.01150017329058,3.63842813934209,3.29270351170991,3.15683653725411,3.93831930152999,3.36685362994643,3.44041552560105,3.34915240076916,2.45538625901814,3.25367366490529,2.3148793317737,8.49355964989016,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1377056468904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,15.9830004079082,15.340738398889,15.2119536841483,0,0,0,0,0,0.599200221036809,0.768436610643109,9.95420278161385,13.095576018174,11.1472229516232,36.8489769880907,29.5963844875162,9.92175473641128,8.62609239164127,15.6267193723704,20.9220173898839,27.5804650264005,21.3513081226178,14.7712642257817,16.6507511356386,17.1901412283731,25.4056529091257,14.6318278608237,25.6701056265041,31.8198872311561,30.8946547334053,28.1463163196204,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.24711072210803,0,0,0,1.54927761754349,0,0,0,0,0,0,1.59857431606684,0,0.593768556259299,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,173.326231830836,223.68908287677,0,0,0,0,34.9012189813237,54.4425717354165,15.5811396619952,76.6565252047939,91.290418266928,26.5968697036237,49.9703090248694,0.81471491080253,1.8661045591514,0.505445516867349,2.10441855886474,0.260240885925407,0.689706313300419,1.80062129805349,3.31550599238573,2.4493139694478,1.92170580427275,2.99845518591132,7.24369438069244,2.58681591519411,2.64748512234947,0.351902248327898,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,64.7693041577512,22.3303008863047,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0,0.329397909448022,0,0.397912944082302,1.36474860983384,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,23.7614873181932,31.0610969469338,0,0,1.57754109708128,0.780877488593277,1.93881057959519,0.477937595905104,0.222798674082394,1.13230612315533,0.809621403349789,1.16902343164525,1.18586333383957,74.2252240934374,0.567760340833074,0,0.162886959353576,1.81467135269789,0,0.971122544619926,0.604647113929502,0,0,0.922305443831782,0,0.727067458955011,0,0,0,0,3.06395645178409,0.36012218806262,0.646793418913773,0.857348140126369,1.24138163549592,1.78368817602071,1.48094118541909,2.13125464380219,0,0,4.41056796109924,0,0,0,0,0,0,32.4494278518392,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.42323626988794,0.756037385752609,0.627264888043406,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,1.69107881605257,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,19.7053385912834,1.12609485270709,4.76194223094889,0.643105137237198,11.5361583928134,119.727390634818,91.6047220649282,89.9445956099853,71.490923854974,72.6187470956881,103.488963942389,75.6025200259622,73.8526773287722,70.2370733925517,79.7350880097803,1.03787347584177,3.19219898720825,3.24393850932855,2.43106717068294,2.51535795153579,3.12533964365024,2.889207461421,3.91466608753899,3.53011130550997,1.76888048234658,4.30914809813408,3.77252682772152,3.09016974650612,3.9695594491019,4.25022470271538,4.76293691283074,3.01299247456624,3.6652751888104,6.1812885120496,3.53277408322554,2.40008476669791,3.37204031702741,2.14592570952589,4.21504608233753,3.01150017329058,3.63842813934209,3.29270351170991,3.15683653725411,3.93831930152999,3.36685362994643,3.44041552560105,3.34915240076916,2.45538625901814,3.25367366490529,2.3148793317737,8.49355964989016,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,0.463735671240843
|short_description=p2@Rbfox3
}}
}}

Latest revision as of 02:01, 27 September 2015

Short description:p2@Rbfox3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rbfox3_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -67bp_to_ENSMUST00000017576, ENSMUST00000106279, NM_001024931, NM_001039167, NM_001039168, uc007mpl.1, uc007mpm.1, uc007mpn.1, uc007mpo.1_5end
EntrezGene:Rbfox3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rbfox3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F136.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.82
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2173.33
cerebellum, neonate N30.CNhs11135.1395-42I2223.69
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.90
corpus striatum, adult.CNhs10487.19-21D854.44
corpus striatum, neonate N00.CNhs11226.630-43F115.58
cortex, adult.CNhs10473.12-14D576.66
cortex, neonate N30.CNhs11107.1392-42F291.29
diencephalon, adult.CNhs10482.20-12F226.60
diencephalon, neonate N30.CNhs11201.1388-42B249.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E864.77
hippocampus, neonate N00.CNhs11228.627-43G122.33
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C223.76
medulla oblongata, neonate N30.CNhs11200.1396-42A331.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I974.23
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C932.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E419.71
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1119.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A291.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A389.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D771.49
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A472.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5103.49
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A675.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A773.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A870.24
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A979.74
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.34e-1723
neuroblast (sensu Vertebrata)1.34e-1723
neuron9.20e-1533
neuronal stem cell9.20e-1533
neuroblast9.20e-1533
electrically signaling cell9.20e-1533
electrically responsive cell6.14e-1139
electrically active cell6.14e-1139
ectodermal cell6.50e-1044
neurectodermal cell6.50e-1044
neural cell1.09e-0943

Uber anatomy
Ontology termp-valuen
central nervous system1.86e-3073
regional part of nervous system3.91e-3054
neurectoderm1.68e-2964
neural plate1.68e-2964
presumptive neural plate1.68e-2964
nervous system4.88e-2975
neural tube1.57e-2852
neural rod1.57e-2852
future spinal cord1.57e-2852
neural keel1.57e-2852
ectoderm-derived structure2.35e-2595
ectoderm2.35e-2595
presumptive ectoderm2.35e-2595
ecto-epithelium3.66e-2573
gray matter6.33e-2534
brain3.39e-2447
future brain3.39e-2447
regional part of brain3.02e-2346
pre-chordal neural plate2.48e-2249
anterior neural tube2.60e-2140
brain grey matter1.40e-2029
regional part of telencephalon1.40e-2029
telencephalon1.40e-2029
regional part of forebrain1.91e-2039
forebrain1.91e-2039
future forebrain1.91e-2039
structure with developmental contribution from neural crest8.81e-1692
cerebral cortex1.25e-1421
cerebral hemisphere1.25e-1421
pallium1.25e-1421
regional part of cerebral cortex7.59e-1217
occipital lobe6.80e-1110
visual cortex6.80e-1110
neocortex6.80e-1110
posterior neural tube1.22e-0712
chordal neural plate1.22e-0712
basal ganglion3.97e-078
nuclear complex of neuraxis3.97e-078
aggregate regional part of brain3.97e-078
collection of basal ganglia3.97e-078
cerebral subcortex3.97e-078
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