FFCP PHASE1:Mm9::chrX:162676855..162676956,+: Difference between revisions
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{{FFCP|EntrezGene=14758|HGNC=|MCL_coexpression_id=1|UniProt=P35803,Q3V0Z9,A2AEG8|association_with_transcript=0bp_to_ENSMUST00000060210,ENSMUST00000112233,NM_001177961,NM_001177962,NM_023122,uc009uwg.2,uc009uwh.2,uc009uwi.2_5end|description=CAGE_peak_1_at_Gpm6b_5end|id=chrX:162676855..162676956,+|ontology_enrichment_celltype=CL:0000221!3.26e-18!44;CL:0000133!3.26e-18!44;CL:0002319!1.01e-17!43;CL:0000055!8.90e-17!50;CL:0000540!3.85e-14!33;CL:0000047!3.85e-14!33;CL:0000031!3.85e-14!33;CL:0000404!3.85e-14!33;CL:0000393!4.88e-14!39;CL:0000211!4.88e-14!39;CL:0000117!6.54e-11!23;CL:0000337!6.54e-11!23;CL:0002321!9.35e-08!70;CL:0000220!9.35e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,2.82e-18,44;CL:0000133,2.82e-18,44;CL:0002319,8.76e-18,43;CL:0000540,3.46e-14,33;CL:0000047,3.46e-14,33;CL:0000031,3.46e-14,33;CL:0000404,3.46e-14,33;CL:0000393,4.38e-14,39;CL:0000211,4.38e-14,39;CL:0000117,6.03e-11,23;CL:0000337,6.03e-11,23;CL:0002321,8.72e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.72e-31!75;UBERON:0001016!1.72e-31!75;UBERON:0001017!1.35e-30!73;UBERON:0005743!1.35e-30!73;UBERON:0004121!1.47e-28!102;UBERON:0000924!1.47e-28!102;UBERON:0006601!1.47e-28!102;UBERON:0000033!9.74e-21!63;UBERON:0001049!1.83e-20!52;UBERON:0005068!1.83e-20!52;UBERON:0006241!1.83e-20!52;UBERON:0007135!1.83e-20!52;UBERON:0002346!2.89e-20!71;UBERON:0003075!2.89e-20!71;UBERON:0007284!2.89e-20!71;UBERON:0000955!1.79e-19!50;UBERON:0006238!1.79e-19!50;UBERON:0002616!6.87e-19!49;UBERON:0002020!2.15e-18!34;UBERON:0002791!7.98e-16!29;UBERON:0003528!7.98e-16!29;UBERON:0001893!7.98e-16!29;UBERON:0003056!9.87e-16!49;UBERON:0003080!1.70e-14!40;UBERON:0002780!6.63e-14!39;UBERON:0001890!6.63e-14!39;UBERON:0006240!6.63e-14!39;UBERON:0000956!5.42e-12!21;UBERON:0001869!5.42e-12!21;UBERON:0000203!5.42e-12!21;UBERON:0002619!2.12e-10!17;UBERON:0007811!1.75e-09!86;UBERON:0000153!2.64e-09!94;UBERON:0000479!1.94e-08!349;UBERON:0000468!2.74e-08!333;UBERON:0000025!6.09e-08!114;UBERON:0004111!8.47e-08!122;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0003076!8.69e-07!12;UBERON:0003057!8.69e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-31,75;UBERON:0004121,7.39e-31,95;UBERON:0000924,7.39e-31,95;UBERON:0006601,7.39e-31,95;UBERON:0001017,1.05e-30,73;UBERON:0002346,8.21e-23,64;UBERON:0003075,8.21e-23,64;UBERON:0007284,8.21e-23,64;UBERON:0010371,1.78e-22,73;UBERON:0000073,1.14e-21,54;UBERON:0001049,1.55e-20,52;UBERON:0005068,1.55e-20,52;UBERON:0006241,1.55e-20,52;UBERON:0007135,1.55e-20,52;UBERON:0002020,1.86e-18,34;UBERON:0000955,9.72e-18,47;UBERON:0006238,9.72e-18,47;UBERON:0002616,3.63e-17,46;UBERON:0003528,7.06e-16,29;UBERON:0002791,7.06e-16,29;UBERON:0001893,7.06e-16,29;UBERON:0003056,8.74e-16,49;UBERON:0010314,2.19e-15,92;UBERON:0003080,1.52e-14,40;UBERON:0002780,5.96e-14,39;UBERON:0001890,5.96e-14,39;UBERON:0006240,5.96e-14,39;UBERON:0000956,4.95e-12,21;UBERON:0001869,4.95e-12,21;UBERON:0000203,4.95e-12,21;UBERON:0002619,1.97e-10,17;UBERON:0000479,6.49e-08,349;UBERON:0000025,8.15e-08,114;UBERON:0004111,1.12e-07,122;UBERON:0002021,1.70e-07,10;UBERON:0000411,1.70e-07,10;UBERON:0001950,1.70e-07,10;UBERON:0003076,8.31e-07,12;UBERON:0003057,8.31e-07,12|phase1_expression=78.472935081349,0,0,0,0,0,0.700837921786577,3.09895976259783,0,0,0,0,0,0.0874204024189974,0,1.61980213911861,0.699561878128147,1.57731082679119,1.50825876966313,0.84877930359606,49.6652814482247,0.297872853602656,0,1.75991665072747,2.98232065387321,0,0,0.430942465371778,0,0.252030129759931,0.665191531965914,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,23.4168081434574,20.3767631751224,3.12029478674859,5.47673941043627,121.221986947528,116.873049214739,157.682648149244,71.1131021856842,129.377307928474,0.167782606057736,0,0,22.3815709351274,43.2665494307523,24.2365883370398,53.4115456669338,50.7831340101152,62.7493089471117,10.165335962074,11.5608323494448,1.3498495759221,0.988866362566974,0.7104801149461,47.3368174619079,86.0649003920282,48.9414970096015,43.0668943278093,43.7475919610875,72.2696990541623,61.4014543845486,42.3818165283741,32.1082327911092,41.3648453974509,135.442533629248,151.309495630947,143.622108594588,47.6109498706,44.0970442163615,52.6122504262328,110.556467604547,84.414391504752,166.550090076723,147.01966415136,119.307468509648,99.1645051790599,28.1701439199445,95.5224519749769,5.50742528533188,0.860423876981386,0,0.539703191637817,0.649776417447669,0,11.9377757111989,20.4516387093669,17.6654483129951,19.4336765980687,76.0554466794075,56.4636500622998,91.7298862943925,14.2213340630666,9.74209684550464,10.1343946190039,7.07734223020697,8.22123933977232,31.5904218049549,2.07818994690755,25.6758283613881,12.1786191324856,7.61031140944993,11.6056433225519,10.347806227942,3.14166478324189,5.93267922562497,5.63937491987655,6.19227386364912,15.6913844448987,8.17113618303456,7.27312879702833,3.72783522436244,291.316893026489,313.751166806556,2.04365644166873,0.11981512450592,0,0.508280908292259,159.826612244946,189.86275016973,96.5025424226799,202.33150870381,191.019446625757,150.646332305681,187.875382632463,16.09061948835,9.70374370758726,15.1633655060205,24.411255282831,6.8963834770233,14.2539304748753,17.4660265911189,23.0578371288644,47.8296589033835,58.2917427296067,56.0336312867178,77.3523078509657,4.74249584452253,12.8592134514117,10.7330185740009,12.9325482132269,14.4584569597311,13.5818344943645,17.6972637310831,25.4763861527671,0,0.257347907114715,0,3.72826390563903,2.81431271977315,3.78130329068131,5.68187365404505,3.93528463494808,4.16521204795921,3.0229412817553,2.95100741539581,3.97002164048376,6.91151369636618,5.91002870684743,9.80932595504854,11.2573990317506,9.44065495751518,8.99183005694491,248.773009151363,124.411676366555,0,0.264450566663544,15.3567540385368,12.7730169523241,10.6959992897337,11.0925938542838,7.11609740303585,7.22857379227725,3.79623249235609,6.0938613247884,4.02136334080431,7.56034593756373,6.82374304916921,0.898819408654221,2.37751854862164,1.39398891278057,10.6214024533726,14.738058126655,9.01661885384643,11.8117770150282,11.4431967428899,10.3099655238768,11.6987593679876,9.00421902675573,8.00693511991011,8.88459580236964,0.296452627087149,3.17005700860579,4.71741588271687,1.12431056192427,1.62288097110802,2.17059443777175,5.0925170356284,4.89083433666378,2.7562988551756,2.74561413188081,11.5014565221884,3.72140947668503,3.43241440426017,2.02063102357689,2.15276896226295,1.92977408545347,32.3318082791558,14.4013472945568,21.1854469374634,18.6719594352707,22.7649540839847,30.6536451118523,43.3239426412545,32.3921855443946,52.807773275574,51.158343308867,47.3580662912737,38.3440156434827,34.5369963731791,27.4833211304872,0,0,27.538799289066,32.2845993176537,208.234115214166,242.628191245861,0,7.32165688892682,34.7059041357882,25.7689571235781,41.5767157624302,42.5364460355543,59.4872459799992,68.2214439201086,45.3387985875882,39.1622849601158,30.8324466798288,133.027024998628,20.7232524404072,23.6827252877449,26.2248004559257,23.7556977080451,3.98235415019888,17.4802058031587,13.302236506449,15.8428266994954,10.0402643579463,19.0609791725235,11.8877014857382,19.2672876623078,17.8248689192361,10.7452497698177,5.27093042874994,4.12542172992747,7.14923172082955,8.64293251350289,8.14959707831353,12.6458850668639,10.995094485821,13.3776613201553,18.5940393280397,12.4830629136986,2.81606049676452,5.93129798418696,5.29268155331909,5.60613260001032,14.3703339759356,8.7453741145826,8.35606408021955,8.53532678674319,3.78925087618806,247.171927580009,10.9357363710626,8.66824845445534,7.77817014952789,6.2161590811548,7.10809984149331,9.60868327467395,0.169978429993855,0.139951452323658,0,3.81868247206045,15.8167996790568,16.2655573701479,16.848833168201,17.3543285692009,13.538478952263,18.4764154547204,15.9521169549898,8.11443420150492,6.22151871800606,6.83473244395618,5.6369293868419,32.5946070375874,27.6315679063353,40.0569447988738,30.2233986937891,35.9876547295357,35.6766005483092,27.6033295869174,19.1892600299051,30.4395992240768,25.63467055695,2.52808896502543,8.31173382689673,10.8873614594717,3.76770386635606,3.04345382634718,2.98022032171897,2.28371354087941,1.62458479892035,1.71642964911851,1.600342939755,0.907435666231565,1.36441033035653,1.53938946624527,0.701261413089414,6.80191150845634,0,0,0,10.8186172658027,13.3254557570339,23.6265595304772,7.93163002592544,10.0314420807073,221.38272230589,179.066517001292,188.482623921561,249.530820763034,162.364557185642,172.229808604852,162.680422555865,141.400857812405,131.864441014404,149.632730096276,3.63255716544618,19.9512436700516,19.8050982674796,17.0174701947806,10.8998844566551,14.8913241844511,19.3354653187405,21.427645952845,30.4873249112224,22.2373546352142,20.7853025909997,24.1441716974178,20.5074901359042,22.0886775796799,21.0788171067101,19.0517476513229,23.292749514916,24.1136525579631,23.0768104449852,18.8414617772029,20.2292858907395,18.6349596467304,17.8827142460491,18.0229556624087,21.2687199738647,19.7998182466523,21.5855007989872,16.5733918205841,19.4199882799582,21.3234063229941,23.133828534214,20.2919233693661,18.415396942636,16.5782420068984,22.9558867067558,31.2263222422432,24.7967504952133,23.2060738372162,17.0246615541271,19.1914534633978,12.7527309591232|short_description=p1@Gpm6b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14758 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P35803,Q3V0Z9,A2AEG8 | |||
|association_with_transcript=0bp_to_ENSMUST00000060210,ENSMUST00000112233,NM_001177961,NM_001177962,NM_023122,uc009uwg.2,uc009uwh.2,uc009uwi.2_5end | |||
|cluster_id=chrX:162676855..162676956,+ | |||
|description=CAGE_peak_1_at_Gpm6b_5end | |||
|id=chrX:162676855..162676956,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.26e-18!44;CL:0000133!3.26e-18!44;CL:0002319!1.01e-17!43;CL:0000055!8.90e-17!50;CL:0000540!3.85e-14!33;CL:0000047!3.85e-14!33;CL:0000031!3.85e-14!33;CL:0000404!3.85e-14!33;CL:0000393!4.88e-14!39;CL:0000211!4.88e-14!39;CL:0000117!6.54e-11!23;CL:0000337!6.54e-11!23;CL:0002321!9.35e-08!70;CL:0000220!9.35e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.82e-18,44;CL:0000133,2.82e-18,44;CL:0002319,8.76e-18,43;CL:0000540,3.46e-14,33;CL:0000047,3.46e-14,33;CL:0000031,3.46e-14,33;CL:0000404,3.46e-14,33;CL:0000393,4.38e-14,39;CL:0000211,4.38e-14,39;CL:0000117,6.03e-11,23;CL:0000337,6.03e-11,23;CL:0002321,8.72e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-31!75;UBERON:0001016!1.72e-31!75;UBERON:0001017!1.35e-30!73;UBERON:0005743!1.35e-30!73;UBERON:0004121!1.47e-28!102;UBERON:0000924!1.47e-28!102;UBERON:0006601!1.47e-28!102;UBERON:0000033!9.74e-21!63;UBERON:0001049!1.83e-20!52;UBERON:0005068!1.83e-20!52;UBERON:0006241!1.83e-20!52;UBERON:0007135!1.83e-20!52;UBERON:0002346!2.89e-20!71;UBERON:0003075!2.89e-20!71;UBERON:0007284!2.89e-20!71;UBERON:0000955!1.79e-19!50;UBERON:0006238!1.79e-19!50;UBERON:0002616!6.87e-19!49;UBERON:0002020!2.15e-18!34;UBERON:0002791!7.98e-16!29;UBERON:0003528!7.98e-16!29;UBERON:0001893!7.98e-16!29;UBERON:0003056!9.87e-16!49;UBERON:0003080!1.70e-14!40;UBERON:0002780!6.63e-14!39;UBERON:0001890!6.63e-14!39;UBERON:0006240!6.63e-14!39;UBERON:0000956!5.42e-12!21;UBERON:0001869!5.42e-12!21;UBERON:0000203!5.42e-12!21;UBERON:0002619!2.12e-10!17;UBERON:0007811!1.75e-09!86;UBERON:0000153!2.64e-09!94;UBERON:0000479!1.94e-08!349;UBERON:0000468!2.74e-08!333;UBERON:0000025!6.09e-08!114;UBERON:0004111!8.47e-08!122;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0003076!8.69e-07!12;UBERON:0003057!8.69e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-31,75;UBERON:0004121,7.39e-31,95;UBERON:0000924,7.39e-31,95;UBERON:0006601,7.39e-31,95;UBERON:0001017,1.05e-30,73;UBERON:0002346,8.21e-23,64;UBERON:0003075,8.21e-23,64;UBERON:0007284,8.21e-23,64;UBERON:0010371,1.78e-22,73;UBERON:0000073,1.14e-21,54;UBERON:0001049,1.55e-20,52;UBERON:0005068,1.55e-20,52;UBERON:0006241,1.55e-20,52;UBERON:0007135,1.55e-20,52;UBERON:0002020,1.86e-18,34;UBERON:0000955,9.72e-18,47;UBERON:0006238,9.72e-18,47;UBERON:0002616,3.63e-17,46;UBERON:0003528,7.06e-16,29;UBERON:0002791,7.06e-16,29;UBERON:0001893,7.06e-16,29;UBERON:0003056,8.74e-16,49;UBERON:0010314,2.19e-15,92;UBERON:0003080,1.52e-14,40;UBERON:0002780,5.96e-14,39;UBERON:0001890,5.96e-14,39;UBERON:0006240,5.96e-14,39;UBERON:0000956,4.95e-12,21;UBERON:0001869,4.95e-12,21;UBERON:0000203,4.95e-12,21;UBERON:0002619,1.97e-10,17;UBERON:0000479,6.49e-08,349;UBERON:0000025,8.15e-08,114;UBERON:0004111,1.12e-07,122;UBERON:0002021,1.70e-07,10;UBERON:0000411,1.70e-07,10;UBERON:0001950,1.70e-07,10;UBERON:0003076,8.31e-07,12;UBERON:0003057,8.31e-07,12 | |||
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| |||
|short_description=p1@Gpm6b | |||
}} |
Latest revision as of 18:28, 1 October 2015
Short description: | p1@Gpm6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpm6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000060210, ENSMUST00000112233, NM_001177961, NM_001177962, NM_023122, uc009uwg.2, uc009uwh.2, uc009uwi.2_5end |
EntrezGene: | Gpm6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.82e-18 | 44 |
neurectodermal cell | 2.82e-18 | 44 |
neural cell | 8.76e-18 | 43 |
neuron | 3.46e-14 | 33 |
neuronal stem cell | 3.46e-14 | 33 |
neuroblast | 3.46e-14 | 33 |
electrically signaling cell | 3.46e-14 | 33 |
electrically responsive cell | 4.38e-14 | 39 |
electrically active cell | 4.38e-14 | 39 |
CNS neuron (sensu Vertebrata) | 6.03e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.03e-11 | 23 |
embryonic cell | 8.72e-08 | 70 |