FFCP PHASE1:Mm9::chr12:109649090..109649109,+: Difference between revisions
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|id=chr12:109649090..109649109,+
|short_description=p@chr12:109649090..109649109,+
|description=CAGE_peak_at_chr12:109649090..109649109,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109649090..109649109,+ | |||
|description=CAGE_peak_at_chr12:109649090..109649109,+ | |||
|id=chr12:109649090..109649109,+ | |||
|ontology_enrichment_celltype=CL:0002614!2.34e-09!3;CL:0000117!1.32e-08!23;CL:0000337!1.32e-08!23;CL:0002611!3.61e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.56e-18,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-27!52;UBERON:0005068!1.48e-27!52;UBERON:0006241!1.48e-27!52;UBERON:0007135!1.48e-27!52;UBERON:0001017!5.98e-22!73;UBERON:0005743!5.98e-22!73;UBERON:0002616!7.22e-22!49;UBERON:0000955!2.44e-21!50;UBERON:0006238!2.44e-21!50;UBERON:0000073!3.20e-21!75;UBERON:0001016!3.20e-21!75;UBERON:0002346!1.29e-20!71;UBERON:0003075!1.29e-20!71;UBERON:0007284!1.29e-20!71;UBERON:0003076!1.03e-18!12;UBERON:0003057!1.03e-18!12;UBERON:0000033!1.02e-17!63;UBERON:0002298!1.11e-17!6;UBERON:0004121!6.71e-17!102;UBERON:0000924!6.71e-17!102;UBERON:0006601!6.71e-17!102;UBERON:0002020!9.86e-16!34;UBERON:0003080!5.00e-13!40;UBERON:0002240!4.95e-12!6;UBERON:0005174!4.95e-12!6;UBERON:0001137!4.95e-12!6;UBERON:0002950!7.91e-12!4;UBERON:0001891!7.91e-12!4;UBERON:0009616!7.91e-12!4;UBERON:0007811!1.05e-11!86;UBERON:0002780!1.43e-11!39;UBERON:0001890!1.43e-11!39;UBERON:0006240!1.43e-11!39;UBERON:0003056!1.53e-11!49;UBERON:0000153!2.63e-10!94;UBERON:0002791!7.69e-10!29;UBERON:0003528!7.69e-10!29;UBERON:0001893!7.69e-10!29;UBERON:0000025!8.60e-10!114;UBERON:0004111!8.60e-10!122;UBERON:0002038!2.34e-09!3;UBERON:0002308!2.34e-09!3;UBERON:0009663!2.34e-09!3;UBERON:0009661!2.34e-09!3;UBERON:0006331!2.34e-09!3;UBERON:0000125!2.34e-09!3;UBERON:0001948!2.83e-09!5;UBERON:0002315!2.83e-09!5;UBERON:0004733!2.23e-08!6;UBERON:0004732!2.23e-08!6;UBERON:0002028!2.23e-08!6;UBERON:0007277!2.23e-08!6;UBERON:0001896!1.69e-07!2;UBERON:0005290!1.69e-07!2;UBERON:0010096!1.69e-07!2;UBERON:0000475!2.90e-07!200;UBERON:0002256!3.61e-07!2;UBERON:0002021!4.10e-07!10;UBERON:0000411!4.10e-07!10;UBERON:0001950!4.10e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.79e-19,2;UBERON:0002298,3.79e-19,2;UBERON:0005290,3.79e-19,2;UBERON:0010096,3.79e-19,2;UBERON:0003076,1.19e-18,12;UBERON:0003057,1.19e-18,12;UBERON:0002256,3.56e-18,2;UBERON:0002240,8.25e-14,6;UBERON:0005174,8.25e-14,6;UBERON:0001137,8.25e-14,6;UBERON:0001049,2.62e-13,52;UBERON:0005068,2.62e-13,52;UBERON:0006241,2.62e-13,52;UBERON:0007135,2.62e-13,52;UBERON:0000073,1.08e-12,54;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002346,1.01e-10,64;UBERON:0003075,1.01e-10,64;UBERON:0007284,1.01e-10,64;UBERON:0010371,2.47e-09,73;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0001948,7.62e-08,5;UBERON:0002315,7.62e-08,5;UBERON:0010314,2.77e-07,92;UBERON:0004733,5.34e-07,6;UBERON:0004732,5.34e-07,6;UBERON:0002028,5.34e-07,6;UBERON:0007277,5.34e-07,6;UBERON:0002616,8.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.54607978666129,0,0,0,0,1.53224805702225,0.46081959976873,0,0,0,0.837548997004143,0.56276261003168,1.06958773443767,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.599162557619291,0.457500602818626,0,0.695297280769106,0.767146371990992,2.28566849015516,2.43361894601636,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,5.04010252346474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,2.05524755931193,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,1.54607978666129,0,0,0,0,1.53224805702225,0.46081959976873,0,0,0,0.837548997004143,0.56276261003168,1.06958773443767,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0.599162557619291,0.457500602818626,0,0.695297280769106,0.767146371990992,2.28566849015516,2.43361894601636,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,5.04010252346474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68741272937475,2.05524755931193,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:109649090..109649109,+ | |||
}} | }} |
Latest revision as of 16:22, 4 August 2015
Short description: | p@chr12:109649090..109649109, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109649090..109649109, + |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.56e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.79e-19 | 2 |
brainstem | 3.79e-19 | 2 |
myelencephalon | 3.79e-19 | 2 |
future myelencephalon | 3.79e-19 | 2 |
posterior neural tube | 1.19e-18 | 12 |
chordal neural plate | 1.19e-18 | 12 |
dorsal horn of spinal cord | 3.56e-18 | 2 |
spinal cord | 8.25e-14 | 6 |
dorsal region element | 8.25e-14 | 6 |
dorsum | 8.25e-14 | 6 |
neural tube | 2.62e-13 | 52 |
neural rod | 2.62e-13 | 52 |
future spinal cord | 2.62e-13 | 52 |
neural keel | 2.62e-13 | 52 |
regional part of nervous system | 1.08e-12 | 54 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
neurectoderm | 1.01e-10 | 64 |
neural plate | 1.01e-10 | 64 |
presumptive neural plate | 1.01e-10 | 64 |
ecto-epithelium | 2.47e-09 | 73 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
regional part of spinal cord | 7.62e-08 | 5 |
gray matter of spinal cord | 7.62e-08 | 5 |
structure with developmental contribution from neural crest | 2.77e-07 | 92 |
segmental subdivision of hindbrain | 5.34e-07 | 6 |
segmental subdivision of nervous system | 5.34e-07 | 6 |
hindbrain | 5.34e-07 | 6 |
presumptive hindbrain | 5.34e-07 | 6 |
regional part of brain | 8.30e-07 | 46 |