FFCP PHASE1:Mm9::chr1:75139349..75139371,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:75139349..75139371,+
|short_description=p1@Fam134a
|description=CAGE_peak_1_at_Fam134a_5end
|association_with_transcript=0bp_to_ENSMUST00000060113,ENSMUST0...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=227298 | |EntrezGene=227298 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6NS82 | |UniProt=Q6NS82 | ||
|association_with_transcript=0bp_to_ENSMUST00000060113,ENSMUST00000097694,NM_170755,uc007bnt.1,uc007bnu.1_5end | |||
|cluster_id=chr1:75139349..75139371,+ | |||
|description=CAGE_peak_1_at_Fam134a_5end | |||
|id=chr1:75139349..75139371,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.57e-10!23;CL:0000337!2.57e-10!23;CL:0002319!3.32e-10!43;CL:0000221!5.70e-10!44;CL:0000133!5.70e-10!44;CL:0000055!9.37e-10!50;CL:0002321!2.93e-09!70;CL:0000220!2.93e-09!70;CL:0000540!3.00e-08!33;CL:0000047!3.00e-08!33;CL:0000031!3.00e-08!33;CL:0000404!3.00e-08!33;CL:0000393!2.91e-07!39;CL:0000211!2.91e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.57e-10,23;CL:0000337,2.57e-10,23;CL:0002319,3.32e-10,43;CL:0000221,5.70e-10,44;CL:0000133,5.70e-10,44;CL:0002321,2.93e-09,70;CL:0000540,3.00e-08,33;CL:0000047,3.00e-08,33;CL:0000031,3.00e-08,33;CL:0000404,3.00e-08,33;CL:0000393,2.91e-07,39;CL:0000211,2.91e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.34e-21!73;UBERON:0005743!3.34e-21!73;UBERON:0000073!1.09e-20!75;UBERON:0001016!1.09e-20!75;UBERON:0001049!6.44e-18!52;UBERON:0005068!6.44e-18!52;UBERON:0006241!6.44e-18!52;UBERON:0007135!6.44e-18!52;UBERON:0000955!8.54e-17!50;UBERON:0006238!8.54e-17!50;UBERON:0004121!8.60e-17!102;UBERON:0000924!8.60e-17!102;UBERON:0006601!8.60e-17!102;UBERON:0002616!2.00e-16!49;UBERON:0002346!2.10e-16!71;UBERON:0003075!2.10e-16!71;UBERON:0007284!2.10e-16!71;UBERON:0000033!4.10e-15!63;UBERON:0002020!1.53e-12!34;UBERON:0003080!2.98e-12!40;UBERON:0003056!3.55e-12!49;UBERON:0002780!9.50e-12!39;UBERON:0001890!9.50e-12!39;UBERON:0006240!9.50e-12!39;UBERON:0002107!4.32e-10!22;UBERON:0007499!4.32e-10!22;UBERON:0006925!4.32e-10!22;UBERON:0009497!4.32e-10!22;UBERON:0000015!4.32e-10!22;UBERON:0002423!4.32e-10!22;UBERON:0006235!4.32e-10!22;UBERON:0008835!4.32e-10!22;UBERON:0003894!4.32e-10!22;UBERON:0004161!4.32e-10!22;UBERON:0008836!4.32e-10!22;UBERON:0002791!5.17e-10!29;UBERON:0003528!5.17e-10!29;UBERON:0001893!5.17e-10!29;UBERON:0000025!1.33e-09!114;UBERON:0009854!1.67e-09!23;UBERON:0009856!1.67e-09!23;UBERON:0004111!5.03e-09!122;UBERON:0002365!1.30e-08!25;UBERON:0002330!1.30e-08!25;UBERON:0000480!2.22e-08!308;UBERON:0000467!2.22e-08!308;UBERON:0007811!4.60e-07!86;UBERON:0005172!7.44e-07!49;UBERON:0005173!7.44e-07!49;UBERON:0002417!7.44e-07!49;UBERON:0000916!7.44e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.34e-21,73;UBERON:0001016,1.09e-20,75;UBERON:0000073,3.64e-19,54;UBERON:0001049,6.44e-18,52;UBERON:0005068,6.44e-18,52;UBERON:0006241,6.44e-18,52;UBERON:0007135,6.44e-18,52;UBERON:0002346,3.97e-17,64;UBERON:0003075,3.97e-17,64;UBERON:0007284,3.97e-17,64;UBERON:0004121,4.61e-17,95;UBERON:0000924,4.61e-17,95;UBERON:0006601,4.61e-17,95;UBERON:0000955,3.99e-15,47;UBERON:0006238,3.99e-15,47;UBERON:0002616,9.17e-15,46;UBERON:0010371,9.08e-13,73;UBERON:0002020,1.53e-12,34;UBERON:0003080,2.98e-12,40;UBERON:0003056,3.55e-12,49;UBERON:0002780,9.50e-12,39;UBERON:0001890,9.50e-12,39;UBERON:0006240,9.50e-12,39;UBERON:0002107,4.32e-10,22;UBERON:0007499,4.32e-10,22;UBERON:0006925,4.32e-10,22;UBERON:0009497,4.32e-10,22;UBERON:0000015,4.32e-10,22;UBERON:0002423,4.32e-10,22;UBERON:0006235,4.32e-10,22;UBERON:0008835,4.32e-10,22;UBERON:0003894,4.32e-10,22;UBERON:0004161,4.32e-10,22;UBERON:0008836,4.32e-10,22;UBERON:0011216,4.41e-10,194;UBERON:0003528,5.17e-10,29;UBERON:0002791,5.17e-10,29;UBERON:0001893,5.17e-10,29;UBERON:0000025,1.33e-09,114;UBERON:0009854,1.67e-09,23;UBERON:0009856,1.67e-09,23;UBERON:0004111,5.03e-09,122;UBERON:0002365,1.30e-08,25;UBERON:0002330,1.30e-08,25;UBERON:0005256,5.53e-07,45;UBERON:0005172,7.44e-07,49;UBERON:0005173,7.44e-07,49;UBERON:0002417,7.44e-07,49;UBERON:0000916,7.44e-07,49 | |||
|phase1_expression=24.3426247599287,41.8770489167233,50.959914811628,66.5421264875026,72.6298808422203,29.2109933126688,27.566291590272,34.0885573885761,18.0209564354133,13.8098070529976,11.1291679346578,12.9230897572445,30.6449306576858,37.3285118329119,43.9704885596675,48.5940641735582,64.3596927877895,25.3947043113381,25.9146279514846,31.4048342330542,54.0875325360804,21.8440092641948,15.9331871374751,26.7187346064989,34.4113921600755,36.1766137392463,27.9995297503399,23.9173068281337,55.2968150618048,32.5118867390311,24.6120866827388,33.6566256933605,34.4436281047359,15.8481681015439,33.2179362713966,26.0988393212833,27.7670324516822,50.6423273191658,34.3787551590472,24.6056159667685,53.5290654108223,60.1080026763432,57.7757320107073,40.9164658420626,49.3705655039036,45.8866880404204,82.1510911565441,41.6428048686653,62.1711897138555,58.328969722285,31.3569584440812,46.0008205967909,24.3284778783718,21.7608642603403,22.5182845425451,17.4936416504444,31.5186783932632,20.6268836910977,76.6779386657876,65.06589045046,81.7642510522971,36.5952094634663,32.9039074561122,89.5400218694992,80.0981753679249,85.9680939084781,88.082432492411,122.565639397576,44.1717748434115,48.7371437377403,51.1089656083858,86.5522482743525,80.6170174473389,42.0143441307292,35.271133334711,47.7993769037211,96.9019752794621,75.2078421321756,76.1888404950968,78.8680000626559,67.6093686221807,67.197824801822,85.7091806934239,87.2282045549104,75.3295361539674,82.2013753471533,65.3486014867883,75.4917755592467,26.4284414732812,31.5133405645296,31.3053647797812,99.8091697298408,111.515298728071,144.100752167297,144.250364673383,148.744926516315,53.5093240701975,26.2462696770209,27.797102492507,34.273938727503,28.3095273751128,20.5322363862909,48.4129955442627,63.9960032837998,12.7729714196616,11.6545538118545,16.1767822404731,73.5344185390746,17.3488382043605,41.1184725209565,29.319020223477,28.010824004717,35.0535555829209,27.7329658616826,30.690652562419,35.4379787549685,79.5967796104684,29.2090700978222,57.4996858767418,23.9414937922166,30.6969710659947,24.2437626567611,26.0948465705371,66.4612409216212,83.3597893117551,27.5893619625279,18.9307896719354,15.5974710058286,21.9831492836402,77.1421792934837,66.7950880115195,56.544458450789,70.398849677872,73.6460517111352,79.7906091108711,70.2504669083391,33.7088294344547,29.7332659758122,36.6447999728828,69.4458124425364,20.0385482162564,35.1750219783214,33.8516804034057,33.6071743773645,43.7474689543038,37.1529788826064,46.1949502079463,42.4273528011986,10.993967639575,11.7245769704048,14.4279921814438,24.769117764316,12.7901734643775,21.9398864908965,23.0475992776897,22.2918378836712,16.8531164955176,18.0143534980301,23.3014069504386,21.7482061162277,16.4168241986767,21.0672611909387,19.4130683179872,14.9540816128027,16.9693824176116,14.4171045745253,19.047411499373,17.1645053279739,17.4433440908289,15.2675741593559,14.6734545277999,14.3275987676826,16.4662586468288,17.312628020088,73.6014819974445,50.1145462287115,41.9631854389423,15.6025834331491,20.6889603019177,19.7401171081373,18.1703120464152,21.9835041839443,31.3553041821267,39.1864789791872,28.4717436926707,34.9161784014903,36.9462756936396,40.1892073523125,37.6280688139902,30.5598598942435,23.1267713365923,35.6462879125317,25.605166628666,23.7636906228236,25.9227792048085,22.1979947351393,23.856155921618,25.4593026201856,34.400676195596,43.9878240979214,51.6525814598123,63.1793479279619,159.491513372886,35.538007517528,38.9186810324142,44.2978361398162,50.1064499829602,63.1884158551332,47.6150342831255,63.2931502391783,68.0967952455149,57.9324581826852,93.4493342427805,86.7088408067613,75.5131168937237,90.6758171830131,78.9348619496414,162.101023178091,30.4842763774898,18.0016841181961,15.8076027148765,15.9560380628677,20.4180516010997,18.7607008334834,29.5174114698657,26.147908812945,21.438379598442,21.2606102062824,25.0343986792255,23.4324540043505,27.6295970985433,29.6530570092099,87.4589446847779,53.8466626980522,23.1129208318947,25.6621174063401,74.0138219843721,67.0450847307402,29.1804202770482,13.1284882146274,28.7112479668794,28.111589589358,32.7443564553854,27.720380562496,36.761781223595,30.8553418559827,36.0281524490656,34.4861912335348,37.5523389049197,62.3363353858306,34.9172609612341,43.8041385021448,34.6949223423117,44.7069033255571,47.7882498023866,25.734747432428,24.4882081141448,21.8781892516842,30.1207930738388,30.7435147943927,37.9889590957285,30.173299546633,25.6678112436999,21.1744627816997,33.7339547439996,40.2228618667929,75.9180320830947,25.0284920703521,32.5983883132541,45.6537884617292,37.2414490648775,45.6624173061301,44.0991375213684,85.859115650317,21.1204537257339,29.444657850071,32.1971461160244,28.525321758876,18.2454802166373,18.8176325775846,25.0681922406587,23.4721486635438,25.0673519501672,71.0178906700252,47.502104861803,27.862227175035,24.0752885580625,49.5409041922337,41.1449625440286,42.3239620432067,24.8168507791029,28.1302419170553,22.9411956515344,36.2774834845743,20.8781755763549,19.3153493770506,21.0610414602512,19.0270349373167,22.4913440658563,23.8709893101133,27.0276800221848,26.699106082371,38.1068021477871,35.4163408459548,116.120745368943,19.5866675317612,26.6388169635927,28.9732270632631,30.4817183407445,25.6813310745983,30.512882047896,33.2021181352073,26.843992172982,62.5702872939356,72.2955315707242,29.3890342184206,27.3679040641722,24.0343639765696,20.6574108534694,25.7798441761173,24.6364879928768,24.5198717020736,21.5626709674883,19.3855583900443,22.55721476988,22.8875440260628,21.8305652857045,25.2075025097663,21.6222269035903,21.0859256762147,12.2092274355736,6.9976808155391,7.55480773638353,34.0013685496655,27.7770063667749,28.7548050099606,25.0811003522507,45.1414893631827,53.0866732060043,53.3977274348325,54.9979692901821,65.8197688376324,56.1767666211927,46.8344216381614,54.6768225187763,63.4952896546151,52.1113770331835,62.1312374102184,7.05753963572401,20.7492934168536,28.6832457666945,29.4159127652636,20.1228636122863,18.9358813703515,25.7806204249874,23.9000666397117,22.1434254618353,26.7859044469625,27.8827229879264,23.5782926732595,23.3167353600007,24.2655327614455,24.4675097750913,25.2435656380029,27.9281225527102,23.1491064556446,25.549325849805,25.6126121033851,25.3723246765207,23.9592338315106,24.3204913746267,22.2380017447463,24.7507670492319,25.2997677596113,27.6221239037887,20.2563677807139,22.4076787845672,30.8628249411756,28.3537693316776,25.0201385233931,26.1907867628601,23.3954630190809,25.6565792604918,48.2134415420236,34.6218780499204,29.2224633505686,27.7368081499823,27.794518809059,23.650519233283 | |phase1_expression=24.3426247599287,41.8770489167233,50.959914811628,66.5421264875026,72.6298808422203,29.2109933126688,27.566291590272,34.0885573885761,18.0209564354133,13.8098070529976,11.1291679346578,12.9230897572445,30.6449306576858,37.3285118329119,43.9704885596675,48.5940641735582,64.3596927877895,25.3947043113381,25.9146279514846,31.4048342330542,54.0875325360804,21.8440092641948,15.9331871374751,26.7187346064989,34.4113921600755,36.1766137392463,27.9995297503399,23.9173068281337,55.2968150618048,32.5118867390311,24.6120866827388,33.6566256933605,34.4436281047359,15.8481681015439,33.2179362713966,26.0988393212833,27.7670324516822,50.6423273191658,34.3787551590472,24.6056159667685,53.5290654108223,60.1080026763432,57.7757320107073,40.9164658420626,49.3705655039036,45.8866880404204,82.1510911565441,41.6428048686653,62.1711897138555,58.328969722285,31.3569584440812,46.0008205967909,24.3284778783718,21.7608642603403,22.5182845425451,17.4936416504444,31.5186783932632,20.6268836910977,76.6779386657876,65.06589045046,81.7642510522971,36.5952094634663,32.9039074561122,89.5400218694992,80.0981753679249,85.9680939084781,88.082432492411,122.565639397576,44.1717748434115,48.7371437377403,51.1089656083858,86.5522482743525,80.6170174473389,42.0143441307292,35.271133334711,47.7993769037211,96.9019752794621,75.2078421321756,76.1888404950968,78.8680000626559,67.6093686221807,67.197824801822,85.7091806934239,87.2282045549104,75.3295361539674,82.2013753471533,65.3486014867883,75.4917755592467,26.4284414732812,31.5133405645296,31.3053647797812,99.8091697298408,111.515298728071,144.100752167297,144.250364673383,148.744926516315,53.5093240701975,26.2462696770209,27.797102492507,34.273938727503,28.3095273751128,20.5322363862909,48.4129955442627,63.9960032837998,12.7729714196616,11.6545538118545,16.1767822404731,73.5344185390746,17.3488382043605,41.1184725209565,29.319020223477,28.010824004717,35.0535555829209,27.7329658616826,30.690652562419,35.4379787549685,79.5967796104684,29.2090700978222,57.4996858767418,23.9414937922166,30.6969710659947,24.2437626567611,26.0948465705371,66.4612409216212,83.3597893117551,27.5893619625279,18.9307896719354,15.5974710058286,21.9831492836402,77.1421792934837,66.7950880115195,56.544458450789,70.398849677872,73.6460517111352,79.7906091108711,70.2504669083391,33.7088294344547,29.7332659758122,36.6447999728828,69.4458124425364,20.0385482162564,35.1750219783214,33.8516804034057,33.6071743773645,43.7474689543038,37.1529788826064,46.1949502079463,42.4273528011986,10.993967639575,11.7245769704048,14.4279921814438,24.769117764316,12.7901734643775,21.9398864908965,23.0475992776897,22.2918378836712,16.8531164955176,18.0143534980301,23.3014069504386,21.7482061162277,16.4168241986767,21.0672611909387,19.4130683179872,14.9540816128027,16.9693824176116,14.4171045745253,19.047411499373,17.1645053279739,17.4433440908289,15.2675741593559,14.6734545277999,14.3275987676826,16.4662586468288,17.312628020088,73.6014819974445,50.1145462287115,41.9631854389423,15.6025834331491,20.6889603019177,19.7401171081373,18.1703120464152,21.9835041839443,31.3553041821267,39.1864789791872,28.4717436926707,34.9161784014903,36.9462756936396,40.1892073523125,37.6280688139902,30.5598598942435,23.1267713365923,35.6462879125317,25.605166628666,23.7636906228236,25.9227792048085,22.1979947351393,23.856155921618,25.4593026201856,34.400676195596,43.9878240979214,51.6525814598123,63.1793479279619,159.491513372886,35.538007517528,38.9186810324142,44.2978361398162,50.1064499829602,63.1884158551332,47.6150342831255,63.2931502391783,68.0967952455149,57.9324581826852,93.4493342427805,86.7088408067613,75.5131168937237,90.6758171830131,78.9348619496414,162.101023178091,30.4842763774898,18.0016841181961,15.8076027148765,15.9560380628677,20.4180516010997,18.7607008334834,29.5174114698657,26.147908812945,21.438379598442,21.2606102062824,25.0343986792255,23.4324540043505,27.6295970985433,29.6530570092099,87.4589446847779,53.8466626980522,23.1129208318947,25.6621174063401,74.0138219843721,67.0450847307402,29.1804202770482,13.1284882146274,28.7112479668794,28.111589589358,32.7443564553854,27.720380562496,36.761781223595,30.8553418559827,36.0281524490656,34.4861912335348,37.5523389049197,62.3363353858306,34.9172609612341,43.8041385021448,34.6949223423117,44.7069033255571,47.7882498023866,25.734747432428,24.4882081141448,21.8781892516842,30.1207930738388,30.7435147943927,37.9889590957285,30.173299546633,25.6678112436999,21.1744627816997,33.7339547439996,40.2228618667929,75.9180320830947,25.0284920703521,32.5983883132541,45.6537884617292,37.2414490648775,45.6624173061301,44.0991375213684,85.859115650317,21.1204537257339,29.444657850071,32.1971461160244,28.525321758876,18.2454802166373,18.8176325775846,25.0681922406587,23.4721486635438,25.0673519501672,71.0178906700252,47.502104861803,27.862227175035,24.0752885580625,49.5409041922337,41.1449625440286,42.3239620432067,24.8168507791029,28.1302419170553,22.9411956515344,36.2774834845743,20.8781755763549,19.3153493770506,21.0610414602512,19.0270349373167,22.4913440658563,23.8709893101133,27.0276800221848,26.699106082371,38.1068021477871,35.4163408459548,116.120745368943,19.5866675317612,26.6388169635927,28.9732270632631,30.4817183407445,25.6813310745983,30.512882047896,33.2021181352073,26.843992172982,62.5702872939356,72.2955315707242,29.3890342184206,27.3679040641722,24.0343639765696,20.6574108534694,25.7798441761173,24.6364879928768,24.5198717020736,21.5626709674883,19.3855583900443,22.55721476988,22.8875440260628,21.8305652857045,25.2075025097663,21.6222269035903,21.0859256762147,12.2092274355736,6.9976808155391,7.55480773638353,34.0013685496655,27.7770063667749,28.7548050099606,25.0811003522507,45.1414893631827,53.0866732060043,53.3977274348325,54.9979692901821,65.8197688376324,56.1767666211927,46.8344216381614,54.6768225187763,63.4952896546151,52.1113770331835,62.1312374102184,7.05753963572401,20.7492934168536,28.6832457666945,29.4159127652636,20.1228636122863,18.9358813703515,25.7806204249874,23.9000666397117,22.1434254618353,26.7859044469625,27.8827229879264,23.5782926732595,23.3167353600007,24.2655327614455,24.4675097750913,25.2435656380029,27.9281225527102,23.1491064556446,25.549325849805,25.6126121033851,25.3723246765207,23.9592338315106,24.3204913746267,22.2380017447463,24.7507670492319,25.2997677596113,27.6221239037887,20.2563677807139,22.4076787845672,30.8628249411756,28.3537693316776,25.0201385233931,26.1907867628601,23.3954630190809,25.6565792604918,48.2134415420236,34.6218780499204,29.2224633505686,27.7368081499823,27.794518809059,23.650519233283 | ||
|short_description=p1@Fam134a | |||
}} | }} |
Latest revision as of 15:09, 1 October 2015
Short description: | p1@Fam134a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam134a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000060113, ENSMUST00000097694, NM_170755, uc007bnt.1, uc007bnu.1_5end |
EntrezGene: | Fam134a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.57e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.57e-10 | 23 |
neural cell | 3.32e-10 | 43 |
ectodermal cell | 5.70e-10 | 44 |
neurectodermal cell | 5.70e-10 | 44 |
embryonic cell | 2.93e-09 | 70 |
neuron | 3.00e-08 | 33 |
neuronal stem cell | 3.00e-08 | 33 |
neuroblast | 3.00e-08 | 33 |
electrically signaling cell | 3.00e-08 | 33 |
electrically responsive cell | 2.91e-07 | 39 |
electrically active cell | 2.91e-07 | 39 |