FFCP PHASE1:Mm9::chr2:30683748..30683831,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:30683748..30683831,-
|short_description=p1@Asb6
|description=CAGE_peak_1_at_Asb6_5end
|association_with_transcript=0bp_to_ENSMUST00000129628,ENSMUST0000014...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72323 | |EntrezGene=72323 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2APZ5,Q91ZU1 | |UniProt=A2APZ5,Q91ZU1 | ||
|association_with_transcript=0bp_to_ENSMUST00000129628,ENSMUST00000144330,NM_133346,uc008jcx.1_5end | |||
|cluster_id=chr2:30683748..30683831,- | |||
|description=CAGE_peak_1_at_Asb6_5end | |||
|id=chr2:30683748..30683831,- | |||
|ontology_enrichment_celltype=CL:0000144!1.52e-24!121;CL:0000012!1.52e-24!121;CL:0002371!6.09e-23!118;CL:0000548!4.95e-22!115;CL:0000004!4.95e-22!115;CL:0000255!4.95e-22!115;CL:0000034!6.82e-19!97;CL:0000723!2.22e-17!91;CL:0000048!2.22e-17!91;CL:0000219!3.77e-17!54;CL:0002320!4.73e-13!46;CL:0000134!4.73e-13!46;CL:0000988!3.20e-11!32;CL:0002032!3.20e-11!32;CL:0000037!3.20e-11!32;CL:0000566!3.20e-11!32;CL:0000837!3.20e-11!32;CL:0000063!9.28e-11!66;CL:0000055!7.67e-10!50;CL:0002031!9.59e-10!25;CL:0002319!1.24e-09!43;CL:0000221!1.55e-09!44;CL:0000133!1.55e-09!44;CL:0000049!1.11e-08!19;CL:0002321!3.14e-08!70;CL:0000220!3.14e-08!70;CL:0000763!1.63e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.82e-19,97;CL:0000723,2.22e-17,91;CL:0000048,2.22e-17,91;CL:0000219,3.77e-17,54;CL:0002320,4.73e-13,46;CL:0000134,4.73e-13,46;CL:0000988,3.20e-11,32;CL:0002032,3.20e-11,32;CL:0000037,3.20e-11,32;CL:0000837,3.20e-11,32;CL:0002031,9.59e-10,25;CL:0002319,1.24e-09,43;CL:0000221,1.55e-09,44;CL:0000133,1.55e-09,44;CL:0000049,1.11e-08,19;CL:0002321,3.14e-08,70;CL:0000763,1.63e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.73e-13!46;UBERON:0000073!9.65e-13!75;UBERON:0001016!9.65e-13!75;UBERON:0001017!5.55e-12!73;UBERON:0005743!5.55e-12!73;UBERON:0001049!2.41e-09!52;UBERON:0005068!2.41e-09!52;UBERON:0006241!2.41e-09!52;UBERON:0007135!2.41e-09!52;UBERON:0004121!7.63e-09!102;UBERON:0000924!7.63e-09!102;UBERON:0006601!7.63e-09!102;UBERON:0002616!4.37e-08!49;UBERON:0002020!4.69e-08!34;UBERON:0000955!4.93e-08!50;UBERON:0006238!4.93e-08!50;UBERON:0002371!6.45e-08!16;UBERON:0002390!1.88e-07!45;UBERON:0003061!1.88e-07!45;UBERON:0002204!3.80e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.73e-13,46;UBERON:0001016,9.65e-13,75;UBERON:0001017,5.55e-12,73;UBERON:0000073,7.04e-10,54;UBERON:0001049,2.41e-09,52;UBERON:0005068,2.41e-09,52;UBERON:0006241,2.41e-09,52;UBERON:0007135,2.41e-09,52;UBERON:0004121,5.71e-09,95;UBERON:0000924,5.71e-09,95;UBERON:0006601,5.71e-09,95;UBERON:0002020,4.69e-08,34;UBERON:0002371,6.45e-08,16;UBERON:0002616,1.85e-07,46;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45;UBERON:0000955,2.08e-07,47;UBERON:0006238,2.08e-07,47;UBERON:0002204,3.80e-07,32 | |||
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| ||
|short_description=p1@Asb6 | |||
}} | }} |
Latest revision as of 13:20, 26 September 2015
Short description: | p1@Asb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Asb6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000129628, ENSMUST00000144330, NM_133346, uc008jcx.1_5end |
EntrezGene: | Asb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.82e-19 | 97 |
somatic stem cell | 2.22e-17 | 91 |
multi fate stem cell | 2.22e-17 | 91 |
motile cell | 3.77e-17 | 54 |
connective tissue cell | 4.73e-13 | 46 |
mesenchymal cell | 4.73e-13 | 46 |
hematopoietic cell | 3.20e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.20e-11 | 32 |
hematopoietic stem cell | 3.20e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.20e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 9.59e-10 | 25 |
neural cell | 1.24e-09 | 43 |
ectodermal cell | 1.55e-09 | 44 |
neurectodermal cell | 1.55e-09 | 44 |
common myeloid progenitor | 1.11e-08 | 19 |
embryonic cell | 3.14e-08 | 70 |
myeloid cell | 1.63e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.73e-13 | 46 |
nervous system | 9.65e-13 | 75 |
central nervous system | 5.55e-12 | 73 |
regional part of nervous system | 7.04e-10 | 54 |
neural tube | 2.41e-09 | 52 |
neural rod | 2.41e-09 | 52 |
future spinal cord | 2.41e-09 | 52 |
neural keel | 2.41e-09 | 52 |
ectoderm-derived structure | 5.71e-09 | 95 |
ectoderm | 5.71e-09 | 95 |
presumptive ectoderm | 5.71e-09 | 95 |
gray matter | 4.69e-08 | 34 |
bone marrow | 6.45e-08 | 16 |
regional part of brain | 1.85e-07 | 46 |
hematopoietic system | 1.88e-07 | 45 |
blood island | 1.88e-07 | 45 |
brain | 2.08e-07 | 47 |
future brain | 2.08e-07 | 47 |
musculoskeletal system | 3.80e-07 | 32 |