FFCP PHASE1:Mm9::chr3:4797337..4797364,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:4797337..4797364,+
|short_description=p@chr3:4797337..4797364,+
|description=CAGE_peak_at_chr3:4797337..4797364,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:4797337..4797364,+ | |||
|description=CAGE_peak_at_chr3:4797337..4797364,+ | |||
|id=chr3:4797337..4797364,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.27e-20!33;CL:0000047!2.27e-20!33;CL:0000031!2.27e-20!33;CL:0000404!2.27e-20!33;CL:0000117!3.28e-17!23;CL:0000337!3.28e-17!23;CL:0000393!2.13e-15!39;CL:0000211!2.13e-15!39;CL:0002319!1.58e-14!43;CL:0000221!6.29e-14!44;CL:0000133!6.29e-14!44;CL:0000055!6.96e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-17,23;CL:0000337,1.40e-17,23;CL:0000540,3.33e-17,33;CL:0000047,3.33e-17,33;CL:0000031,3.33e-17,33;CL:0000404,3.33e-17,33;CL:0000393,1.85e-13,39;CL:0000211,1.85e-13,39;CL:0002319,1.45e-11,43;CL:0000221,3.78e-11,44;CL:0000133,3.78e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.28e-22!73;UBERON:0005743!4.28e-22!73;UBERON:0000073!8.21e-22!75;UBERON:0001016!8.21e-22!75;UBERON:0001049!1.37e-15!52;UBERON:0005068!1.37e-15!52;UBERON:0006241!1.37e-15!52;UBERON:0007135!1.37e-15!52;UBERON:0004121!3.12e-15!102;UBERON:0000924!3.12e-15!102;UBERON:0006601!3.12e-15!102;UBERON:0002020!9.06e-15!34;UBERON:0002346!3.71e-14!71;UBERON:0003075!3.71e-14!71;UBERON:0007284!3.71e-14!71;UBERON:0000955!2.73e-12!50;UBERON:0006238!2.73e-12!50;UBERON:0002616!1.01e-11!49;UBERON:0003080!1.17e-10!40;UBERON:0002791!1.97e-10!29;UBERON:0003528!1.97e-10!29;UBERON:0001893!1.97e-10!29;UBERON:0000033!2.44e-10!63;UBERON:0002780!6.82e-10!39;UBERON:0001890!6.82e-10!39;UBERON:0006240!6.82e-10!39;UBERON:0003056!1.61e-09!49;UBERON:0002420!5.66e-08!8;UBERON:0007245!5.66e-08!8;UBERON:0010009!5.66e-08!8;UBERON:0010011!5.66e-08!8;UBERON:0000454!5.66e-08!8;UBERON:0002240!2.97e-07!6;UBERON:0005174!2.97e-07!6;UBERON:0001137!2.97e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.26e-17,73;UBERON:0001016,5.11e-16,75;UBERON:0000073,1.53e-12,54;UBERON:0001049,3.93e-12,52;UBERON:0005068,3.93e-12,52;UBERON:0006241,3.93e-12,52;UBERON:0007135,3.93e-12,52;UBERON:0002020,5.81e-12,34;UBERON:0002346,4.92e-11,64;UBERON:0003075,4.92e-11,64;UBERON:0007284,4.92e-11,64;UBERON:0004121,2.14e-10,95;UBERON:0000924,2.14e-10,95;UBERON:0006601,2.14e-10,95;UBERON:0002240,9.04e-10,6;UBERON:0005174,9.04e-10,6;UBERON:0001137,9.04e-10,6;UBERON:0002420,5.66e-09,8;UBERON:0007245,5.66e-09,8;UBERON:0010009,5.66e-09,8;UBERON:0010011,5.66e-09,8;UBERON:0000454,5.66e-09,8;UBERON:0010371,1.16e-08,73;UBERON:0001948,1.28e-08,5;UBERON:0002315,1.28e-08,5;UBERON:0000955,1.15e-07,47;UBERON:0006238,1.15e-07,47;UBERON:0003076,1.68e-07,12;UBERON:0003057,1.68e-07,12;UBERON:0002616,4.48e-07,46;UBERON:0003528,4.65e-07,29;UBERON:0002791,4.65e-07,29;UBERON:0001893,4.65e-07,29;UBERON:0003080,9.72e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,3.03474691289397,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.630974884054146,4.85606673486466,4.63823935998388,2.20483438586917,2.77951865952885,0.919218786610021,0,2.29837208553338,4.30098293117482,3.95658863190582,5.58074625974699,4.68822033501084,2.79182999001381,3.37657566019008,3.20876320331301,8.54422897873636,14.0947963991112,5.59198337475902,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,7.18995069143149,0.457500602818626,7.91622418311046,0.521472960576829,0.511430914660661,3.32460871295296,2.75810147215188,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.384341160854549,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.73361216944708,0,0,0,0,0,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,5.39173758324135,0,0,2.83957397474631,1.95219372148319,1.50796378412959,0.955875191810208,0.891194696329576,0,1.21443210502468,0.876767573733936,1.18586333383957,2.24924921495265,0,0,0.162886959353576,0,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,3.22227665555024,2.29158205375759,1.03111909406213,0.685082519770642,0,1.35004500046361,0,0,0,0.31136204275253,1.59609949360412,1.36586884603307,2.91728060481953,2.09613162627982,0.919217542250071,2.44471400581777,2.47242068686673,2.56735367673452,2.02157769411038,3.29523089857312,2.82939512079114,1.96647165686753,1.98477972455095,2.69946704091382,2.85776214769844,1.62238056322798,1.92909220463705,2.06042950401653,2.50238164228475,3.42869252385415,1.59728225543404,1.66905332963125,2.18019624948493,2.54095327121393,2.28459441307527,2.19513567447327,1.31534855718921,2.98769050460896,2.24456908663095,1.89816028998679,1.77308068276014,2.04615521584845,2.32405261778949,1.73615949883027,3.74715866906919,2.57324769289949,1.07435527024149,0.382576664137687,0.661774257358546,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,3.03474691289397,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.630974884054146,4.85606673486466,4.63823935998388,2.20483438586917,2.77951865952885,0.919218786610021,0,2.29837208553338,4.30098293117482,3.95658863190582,5.58074625974699,4.68822033501084,2.79182999001381,3.37657566019008,3.20876320331301,8.54422897873636,14.0947963991112,5.59198337475902,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,7.18995069143149,0.457500602818626,7.91622418311046,0.521472960576829,0.511430914660661,3.32460871295296,2.75810147215188,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.384341160854549,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.73361216944708,0,0,0,0,0,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,5.39173758324135,0,0,2.83957397474631,1.95219372148319,1.50796378412959,0.955875191810208,0.891194696329576,0,1.21443210502468,0.876767573733936,1.18586333383957,2.24924921495265,0,0,0.162886959353576,0,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.120625849856312,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,3.22227665555024,2.29158205375759,1.03111909406213,0.685082519770642,0,1.35004500046361,0,0,0,0.31136204275253,1.59609949360412,1.36586884603307,2.91728060481953,2.09613162627982,0.919217542250071,2.44471400581777,2.47242068686673,2.56735367673452,2.02157769411038,3.29523089857312,2.82939512079114,1.96647165686753,1.98477972455095,2.69946704091382,2.85776214769844,1.62238056322798,1.92909220463705,2.06042950401653,2.50238164228475,3.42869252385415,1.59728225543404,1.66905332963125,2.18019624948493,2.54095327121393,2.28459441307527,2.19513567447327,1.31534855718921,2.98769050460896,2.24456908663095,1.89816028998679,1.77308068276014,2.04615521584845,2.32405261778949,1.73615949883027,3.74715866906919,2.57324769289949,1.07435527024149,0.382576664137687,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr3:4797337..4797364,+ | |||
}} | }} |
Latest revision as of 10:38, 6 August 2015
Short description: | p@chr3:4797337..4797364, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:4797337..4797364, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.40e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-17 | 23 |
neuron | 3.33e-17 | 33 |
neuronal stem cell | 3.33e-17 | 33 |
neuroblast | 3.33e-17 | 33 |
electrically signaling cell | 3.33e-17 | 33 |
electrically responsive cell | 1.85e-13 | 39 |
electrically active cell | 1.85e-13 | 39 |
neural cell | 1.45e-11 | 43 |
ectodermal cell | 3.78e-11 | 44 |
neurectodermal cell | 3.78e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.26e-17 | 73 |
nervous system | 5.11e-16 | 75 |
regional part of nervous system | 1.53e-12 | 54 |
neural tube | 3.93e-12 | 52 |
neural rod | 3.93e-12 | 52 |
future spinal cord | 3.93e-12 | 52 |
neural keel | 3.93e-12 | 52 |
gray matter | 5.81e-12 | 34 |
neurectoderm | 4.92e-11 | 64 |
neural plate | 4.92e-11 | 64 |
presumptive neural plate | 4.92e-11 | 64 |
ectoderm-derived structure | 2.14e-10 | 95 |
ectoderm | 2.14e-10 | 95 |
presumptive ectoderm | 2.14e-10 | 95 |
spinal cord | 9.04e-10 | 6 |
dorsal region element | 9.04e-10 | 6 |
dorsum | 9.04e-10 | 6 |
basal ganglion | 5.66e-09 | 8 |
nuclear complex of neuraxis | 5.66e-09 | 8 |
aggregate regional part of brain | 5.66e-09 | 8 |
collection of basal ganglia | 5.66e-09 | 8 |
cerebral subcortex | 5.66e-09 | 8 |
ecto-epithelium | 1.16e-08 | 73 |
regional part of spinal cord | 1.28e-08 | 5 |
gray matter of spinal cord | 1.28e-08 | 5 |
brain | 1.15e-07 | 47 |
future brain | 1.15e-07 | 47 |
posterior neural tube | 1.68e-07 | 12 |
chordal neural plate | 1.68e-07 | 12 |
regional part of brain | 4.48e-07 | 46 |
brain grey matter | 4.65e-07 | 29 |
regional part of telencephalon | 4.65e-07 | 29 |
telencephalon | 4.65e-07 | 29 |
anterior neural tube | 9.72e-07 | 40 |