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FFCP PHASE1:Mm9::chr4:9196432..9196482,+: Difference between revisions

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(Created page with "{{FFCP |id=chr4:9196432..9196482,+ |short_description=p1@Clvs1 |description=CAGE_peak_1_at_Clvs1_5end |association_with_transcript=0bp_to_ENSMUST00000038841,ENSMUST0000012...")
 
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{{FFCP
{{FFCP
|id=chr4:9196432..9196482,+
|DHSsupport=NA
|short_description=p1@Clvs1
|DPIdataset=NA
|description=CAGE_peak_1_at_Clvs1_5end
|association_with_transcript=0bp_to_ENSMUST00000038841,ENSMUST00000128117,ENSMUST00000142369,ENSMUST00000147285,NM_028940,uc008ryc.2,uc008ryd.2,uc008rye.2_5end
|EntrezGene=74438
|EntrezGene=74438
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9D4C9
|UniProt=Q9D4C9
|association_with_transcript=0bp_to_ENSMUST00000038841,ENSMUST00000128117,ENSMUST00000142369,ENSMUST00000147285,NM_028940,uc008ryc.2,uc008ryd.2,uc008rye.2_5end
|cluster_id=chr4:9196432..9196482,+
|description=CAGE_peak_1_at_Clvs1_5end
|id=chr4:9196432..9196482,+
|ontology_enrichment_celltype=CL:0000540!7.27e-18!33;CL:0000047!7.27e-18!33;CL:0000031!7.27e-18!33;CL:0000404!7.27e-18!33;CL:0000117!4.86e-14!23;CL:0000337!4.86e-14!23;CL:0000393!1.52e-12!39;CL:0000211!1.52e-12!39;CL:0002319!9.13e-12!43;CL:0000221!9.54e-12!44;CL:0000133!9.54e-12!44;CL:0000055!5.40e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,8.63e-20,33;CL:0000047,8.63e-20,33;CL:0000031,8.63e-20,33;CL:0000404,8.63e-20,33;CL:0000117,3.29e-16,23;CL:0000337,3.29e-16,23;CL:0000393,1.13e-14,39;CL:0000211,1.13e-14,39;CL:0002319,1.94e-13,43;CL:0000221,7.73e-13,44;CL:0000133,7.73e-13,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.24e-30!75;UBERON:0001016!3.24e-30!75;UBERON:0001017!3.97e-30!73;UBERON:0005743!3.97e-30!73;UBERON:0002346!5.27e-30!71;UBERON:0003075!5.27e-30!71;UBERON:0007284!5.27e-30!71;UBERON:0004121!2.83e-28!102;UBERON:0000924!2.83e-28!102;UBERON:0006601!2.83e-28!102;UBERON:0001049!3.32e-24!52;UBERON:0005068!3.32e-24!52;UBERON:0006241!3.32e-24!52;UBERON:0007135!3.32e-24!52;UBERON:0000033!6.46e-24!63;UBERON:0000955!4.86e-23!50;UBERON:0006238!4.86e-23!50;UBERON:0002616!3.25e-22!49;UBERON:0003056!1.72e-21!49;UBERON:0002020!3.74e-19!34;UBERON:0003080!5.66e-19!40;UBERON:0002780!3.33e-18!39;UBERON:0001890!3.33e-18!39;UBERON:0006240!3.33e-18!39;UBERON:0002791!4.18e-16!29;UBERON:0003528!4.18e-16!29;UBERON:0001893!4.18e-16!29;UBERON:0000956!3.01e-11!21;UBERON:0001869!3.01e-11!21;UBERON:0000203!3.01e-11!21;UBERON:0007811!6.10e-11!86;UBERON:0002619!5.33e-09!17;UBERON:0000153!1.87e-08!94;UBERON:0002021!5.28e-08!10;UBERON:0000411!5.28e-08!10;UBERON:0001950!5.28e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.89e-33,75;UBERON:0001017,2.48e-33,73;UBERON:0002346,1.16e-31,64;UBERON:0003075,1.16e-31,64;UBERON:0007284,1.16e-31,64;UBERON:0004121,1.72e-29,95;UBERON:0000924,1.72e-29,95;UBERON:0006601,1.72e-29,95;UBERON:0000073,6.75e-28,54;UBERON:0001049,1.92e-26,52;UBERON:0005068,1.92e-26,52;UBERON:0006241,1.92e-26,52;UBERON:0007135,1.92e-26,52;UBERON:0010371,9.30e-25,73;UBERON:0003056,5.86e-23,49;UBERON:0000955,9.22e-23,47;UBERON:0006238,9.22e-23,47;UBERON:0002616,7.85e-22,46;UBERON:0002020,8.90e-22,34;UBERON:0003080,5.78e-20,40;UBERON:0010314,7.88e-20,92;UBERON:0002780,4.37e-19,39;UBERON:0001890,4.37e-19,39;UBERON:0006240,4.37e-19,39;UBERON:0003528,3.32e-18,29;UBERON:0002791,3.32e-18,29;UBERON:0001893,3.32e-18,29;UBERON:0000956,1.60e-12,21;UBERON:0001869,1.60e-12,21;UBERON:0000203,1.60e-12,21;UBERON:0002619,6.72e-10,17;UBERON:0002021,3.98e-09,10;UBERON:0000411,3.98e-09,10;UBERON:0001950,3.98e-09,10;UBERON:0003076,5.43e-07,12;UBERON:0003057,5.43e-07,12;UBERON:0002420,5.97e-07,8;UBERON:0007245,5.97e-07,8;UBERON:0010009,5.97e-07,8;UBERON:0010011,5.97e-07,8;UBERON:0000454,5.97e-07,8
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,15.6479653877968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,31.9660008158165,44.4352422588508,27.2547503507657,0,0,0,0,0,0,0,28.0998849355974,26.3261579746797,28.8145197051393,23.4233807211119,18.5529574399355,23.1507610516263,15.2394298918996,16.5459381589804,40.7428759697738,42.6475709204527,48.2324514424605,36.2687291258033,41.0779519774819,45.3194632384381,34.8978748751726,28.138130501584,39.8803426697474,48.3190880176815,44.4199644093201,46.9726603479757,1.06016670666458,1.36028808192214,0,0,0,0,0,0,2.24711072210803,0,0,0,0.563373679106722,0,0,0,0,0,0,1.94112595522402,0,5.19547486726887,3.64319186208885,6.08930956624282,2.53677046981664,5.12456977878917,5.17390311397101,1.25666591329675,0,0.433798070759735,0,0,0,0,1.86391761218122,121.211249962781,85.6637030867031,0,0,0,0,64.5597655834786,72.285095245343,33.8010207183605,58.7526202249894,43.9830586608169,67.1155383927379,52.7284104970212,0.101839363850316,0,0,3.99839526184301,1.95180664444056,4.36813998423599,5.76198815377118,7.08312643827861,10.2054748726992,14.9893052733274,15.4607845523553,9.05461797586555,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,58.0400258036991,33.5469036356467,0,0.528901133327089,3.41261200856374,5.10920678092965,4.63922860759536,4.23535401709019,3.11329261382818,2.28270751335071,0.474529061544512,1.97638745668813,0.502670417600539,0.994782360205754,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,1.71372768914593,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,67.2706972048848,54.0345875190057,0,0,18.6149849455591,15.6175497718655,20.8960695800815,5.4962823529087,12.2539270745317,15.286132662597,17.8116708736954,25.7185154961954,28.0654322342032,80.00900778903,0,0,0,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,54.8107765263599,1.44048875225048,0.646793418913773,1.50035924522115,0.886701168211368,2.67553226403106,4.60737257685939,2.43571959291679,3.05073220482823,0.21183207086382,1.10264199027481,0,0,0,0,0,0.291480836629851,64.8988557036784,0,0,0,0,0,0,0,0,0,0,3.16335993581135,2.64315307264903,3.34816556547584,2.50905955217362,1.9652630737156,1.75323650300267,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.375364950902364,0,0,0,55.9104324190896,53.8580526713397,51.5605962095457,50.6966887913878,43.1601987455505,43.0574521512129,40.5013500139084,61.243683638494,62.9867948488044,41.4208249401456,6.95375228813984,12.369771075432,9.73181552798565,11.6691224192781,7.1268475293514,6.25067928730048,8.88986911206461,8.03536723231687,8.3438994493872,6.57012750585873,10.3926512954998,9.24269072791773,11.143339388916,9.21962194630118,7.63891737109657,7.62069906052918,8.80720877180902,5.78727661391115,9.47797571847605,8.53753736779504,10.6289468239479,6.38912902173615,6.19934093863034,8.28474574804273,10.9166881281784,8.630690004951,9.51225458938417,10.5227884575137,9.91370031074791,8.97827634652382,8.89762635931306,6.59980031916275,4.50154147486658,7.12709469455443,7.33045121728337,12.4905288968973,8.18760629558929,4.51229213501426,4.78220830172108,1.54413993383661,1.15933917810211
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,15.6479653877968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,31.9660008158165,44.4352422588508,27.2547503507657,0,0,0,0,0,0,0,28.0998849355974,26.3261579746797,28.8145197051393,23.4233807211119,18.5529574399355,23.1507610516263,15.2394298918996,16.5459381589804,40.7428759697738,42.6475709204527,48.2324514424605,36.2687291258033,41.0779519774819,45.3194632384381,34.8978748751726,28.138130501584,39.8803426697474,48.3190880176815,44.4199644093201,46.9726603479757,1.06016670666458,1.36028808192214,0,0,0,0,0,0,2.24711072210803,0,0,0,0.563373679106722,0,0,0,0,0,0,1.94112595522402,0,5.19547486726887,3.64319186208885,6.08930956624282,2.53677046981664,5.12456977878917,5.17390311397101,1.25666591329675,0,0.433798070759735,0,0,0,0,1.86391761218122,121.211249962781,85.6637030867031,0,0,0,0,64.5597655834786,72.285095245343,33.8010207183605,58.7526202249894,43.9830586608169,67.1155383927379,52.7284104970212,0.101839363850316,0,0,3.99839526184301,1.95180664444056,4.36813998423599,5.76198815377118,7.08312643827861,10.2054748726992,14.9893052733274,15.4607845523553,9.05461797586555,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,58.0400258036991,33.5469036356467,0,0.528901133327089,3.41261200856374,5.10920678092965,4.63922860759536,4.23535401709019,3.11329261382818,2.28270751335071,0.474529061544512,1.97638745668813,0.502670417600539,0.994782360205754,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,1.71372768914593,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,67.2706972048848,54.0345875190057,0,0,18.6149849455591,15.6175497718655,20.8960695800815,5.4962823529087,12.2539270745317,15.286132662597,17.8116708736954,25.7185154961954,28.0654322342032,80.00900778903,0,0,0,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,54.8107765263599,1.44048875225048,0.646793418913773,1.50035924522115,0.886701168211368,2.67553226403106,4.60737257685939,2.43571959291679,3.05073220482823,0.21183207086382,1.10264199027481,0,0,0,0,0,0.291480836629851,64.8988557036784,0,0,0,0,0,0,0,0,0,0,3.16335993581135,2.64315307264903,3.34816556547584,2.50905955217362,1.9652630737156,1.75323650300267,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.375364950902364,0,0,0,55.9104324190896,53.8580526713397,51.5605962095457,50.6966887913878,43.1601987455505,43.0574521512129,40.5013500139084,61.243683638494,62.9867948488044,41.4208249401456,6.95375228813984,12.369771075432,9.73181552798565,11.6691224192781,7.1268475293514,6.25067928730048,8.88986911206461,8.03536723231687,8.3438994493872,6.57012750585873,10.3926512954998,9.24269072791773,11.143339388916,9.21962194630118,7.63891737109657,7.62069906052918,8.80720877180902,5.78727661391115,9.47797571847605,8.53753736779504,10.6289468239479,6.38912902173615,6.19934093863034,8.28474574804273,10.9166881281784,8.630690004951,9.51225458938417,10.5227884575137,9.91370031074791,8.97827634652382,8.89762635931306,6.59980031916275,4.50154147486658,7.12709469455443,7.33045121728337,12.4905288968973,8.18760629558929,4.51229213501426,4.78220830172108,1.54413993383661,1.15933917810211
|short_description=p1@Clvs1
}}
}}

Latest revision as of 07:09, 27 September 2015

Short description:p1@Clvs1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clvs1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000038841, ENSMUST00000128117, ENSMUST00000142369, ENSMUST00000147285, NM_028940, uc008ryc.2, uc008ryd.2, uc008rye.2_5end
EntrezGene:Clvs1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clvs1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C331.97
Mouse Granule cells, donor2.CNhs12357.11731-123E344.44
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D748.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F644.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E146.97
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2121.21
cerebellum, neonate N30.CNhs11135.1395-42I285.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A464.56
corpus striatum, adult.CNhs10487.19-21D872.29
corpus striatum, neonate N00.CNhs11226.630-43F133.80
cortex, adult.CNhs10473.12-14D558.75
cortex, neonate N30.CNhs11107.1392-42F243.98
diencephalon, adult.CNhs10482.20-12F267.12
diencephalon, neonate N30.CNhs11201.1388-42B252.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C610.21
eyeball, neonate N01.CNhs11140.1532-43E714.99
eyeball, neonate N02.CNhs11205.1551-44G815.46
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E858.04
hippocampus, neonate N00.CNhs11228.627-43G133.55
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C267.27
medulla oblongata, neonate N30.CNhs11200.1396-42A354.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.07
olfactory brain, adult.CNhs10489.18-22I980.01
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G854.81
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C964.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A253.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A351.56
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A640.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A761.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A862.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.42
whole body, embryo E11.CNhs11014.324-5I86.95
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.63
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.63e-2033
neuronal stem cell8.63e-2033
neuroblast8.63e-2033
electrically signaling cell8.63e-2033
CNS neuron (sensu Vertebrata)3.29e-1623
neuroblast (sensu Vertebrata)3.29e-1623
electrically responsive cell1.13e-1439
electrically active cell1.13e-1439
neural cell1.94e-1343
ectodermal cell7.73e-1344
neurectodermal cell7.73e-1344

Uber anatomy
Ontology termp-valuen
nervous system1.89e-3375
central nervous system2.48e-3373
neurectoderm1.16e-3164
neural plate1.16e-3164
presumptive neural plate1.16e-3164
ectoderm-derived structure1.72e-2995
ectoderm1.72e-2995
presumptive ectoderm1.72e-2995
regional part of nervous system6.75e-2854
neural tube1.92e-2652
neural rod1.92e-2652
future spinal cord1.92e-2652
neural keel1.92e-2652
ecto-epithelium9.30e-2573
pre-chordal neural plate5.86e-2349
brain9.22e-2347
future brain9.22e-2347
regional part of brain7.85e-2246
gray matter8.90e-2234
anterior neural tube5.78e-2040
structure with developmental contribution from neural crest7.88e-2092
regional part of forebrain4.37e-1939
forebrain4.37e-1939
future forebrain4.37e-1939
brain grey matter3.32e-1829
regional part of telencephalon3.32e-1829
telencephalon3.32e-1829
cerebral cortex1.60e-1221
cerebral hemisphere1.60e-1221
pallium1.60e-1221
regional part of cerebral cortex6.72e-1017
occipital lobe3.98e-0910
visual cortex3.98e-0910
neocortex3.98e-0910
posterior neural tube5.43e-0712
chordal neural plate5.43e-0712
basal ganglion5.97e-078
nuclear complex of neuraxis5.97e-078
aggregate regional part of brain5.97e-078
collection of basal ganglia5.97e-078
cerebral subcortex5.97e-078
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