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FFCP PHASE1:Mm9::chr5:8368049..8368107,-: Difference between revisions

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(Created page with "{{FFCP |id=chr5:8368049..8368107,- |short_description=p1@Adam22 |description=CAGE_peak_1_at_Adam22_5end |association_with_transcript=0bp_to_ENSMUST00000046838,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr5:8368049..8368107,-
|DHSsupport=NA
|short_description=p1@Adam22
|DPIdataset=NA
|description=CAGE_peak_1_at_Adam22_5end
|association_with_transcript=0bp_to_ENSMUST00000046838,ENSMUST00000078296,ENSMUST00000088744,ENSMUST00000088745,ENSMUST00000088746,ENSMUST00000088747,ENSMUST00000088752,ENSMUST00000088762,ENSMUST00000102987,ENSMUST00000115385,ENSMUST00000115388,ENSMUST00000164206,NM_001007220,NM_001007221,NM_001098225,uc008wjk.2,uc008wjv.1,uc008wjy.1,uc008wjz.1,uc008wkb.1_5end
|EntrezGene=11496
|EntrezGene=11496
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9R1V6,E9QLC5,D3YUQ0,E9Q767,A4FUT9,D6QSS8
|UniProt=Q9R1V6,E9QLC5,D3YUQ0,E9Q767,A4FUT9,D6QSS8
|association_with_transcript=0bp_to_ENSMUST00000046838,ENSMUST00000078296,ENSMUST00000088744,ENSMUST00000088745,ENSMUST00000088746,ENSMUST00000088747,ENSMUST00000088752,ENSMUST00000088762,ENSMUST00000102987,ENSMUST00000115385,ENSMUST00000115388,ENSMUST00000164206,NM_001007220,NM_001007221,NM_001098225,uc008wjk.2,uc008wjv.1,uc008wjy.1,uc008wjz.1,uc008wkb.1_5end
|cluster_id=chr5:8368049..8368107,-
|description=CAGE_peak_1_at_Adam22_5end
|id=chr5:8368049..8368107,-
|ontology_enrichment_celltype=CL:0000221!3.26e-15!44;CL:0000133!3.26e-15!44;CL:0002319!4.76e-15!43;CL:0000540!1.47e-14!33;CL:0000047!1.47e-14!33;CL:0000031!1.47e-14!33;CL:0000404!1.47e-14!33;CL:0000055!1.35e-11!50;CL:0000393!1.63e-11!39;CL:0000211!1.63e-11!39;CL:0000117!3.17e-10!23;CL:0000337!3.17e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000221,1.50e-15,44;CL:0000133,1.50e-15,44;CL:0002319,2.22e-15,43;CL:0000540,7.05e-15,33;CL:0000047,7.05e-15,33;CL:0000031,7.05e-15,33;CL:0000404,7.05e-15,33;CL:0000393,3.54e-11,39;CL:0000211,3.54e-11,39;CL:0000117,1.94e-10,23;CL:0000337,1.94e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.12e-33!73;UBERON:0005743!2.12e-33!73;UBERON:0000073!3.13e-32!75;UBERON:0001016!3.13e-32!75;UBERON:0004121!2.99e-30!102;UBERON:0000924!2.99e-30!102;UBERON:0006601!2.99e-30!102;UBERON:0002346!3.12e-26!71;UBERON:0003075!3.12e-26!71;UBERON:0007284!3.12e-26!71;UBERON:0000033!2.00e-25!63;UBERON:0001049!6.00e-24!52;UBERON:0005068!6.00e-24!52;UBERON:0006241!6.00e-24!52;UBERON:0007135!6.00e-24!52;UBERON:0000955!4.97e-23!50;UBERON:0006238!4.97e-23!50;UBERON:0002616!2.07e-22!49;UBERON:0003056!6.28e-20!49;UBERON:0002020!2.54e-17!34;UBERON:0003080!4.12e-17!40;UBERON:0002780!1.76e-16!39;UBERON:0001890!1.76e-16!39;UBERON:0006240!1.76e-16!39;UBERON:0002791!9.67e-15!29;UBERON:0003528!9.67e-15!29;UBERON:0001893!9.67e-15!29;UBERON:0000956!2.88e-11!21;UBERON:0001869!2.88e-11!21;UBERON:0000203!2.88e-11!21;UBERON:0000153!6.92e-11!94;UBERON:0007811!2.75e-10!86;UBERON:0004111!1.34e-09!122;UBERON:0000025!1.49e-09!114;UBERON:0002619!2.07e-09!17;UBERON:0002021!4.34e-08!10;UBERON:0000411!4.34e-08!10;UBERON:0001950!4.34e-08!10;UBERON:0003076!1.72e-07!12;UBERON:0003057!1.72e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.46e-34,73;UBERON:0001016,5.46e-33,75;UBERON:0004121,2.84e-32,95;UBERON:0000924,2.84e-32,95;UBERON:0006601,2.84e-32,95;UBERON:0002346,2.13e-29,64;UBERON:0003075,2.13e-29,64;UBERON:0007284,2.13e-29,64;UBERON:0010314,2.06e-27,92;UBERON:0010371,3.13e-27,73;UBERON:0000073,8.15e-26,54;UBERON:0001049,1.68e-24,52;UBERON:0005068,1.68e-24,52;UBERON:0006241,1.68e-24,52;UBERON:0007135,1.68e-24,52;UBERON:0000955,1.34e-21,47;UBERON:0006238,1.34e-21,47;UBERON:0002616,5.61e-21,46;UBERON:0003056,2.21e-20,49;UBERON:0002020,1.04e-17,34;UBERON:0003080,1.70e-17,40;UBERON:0002780,7.55e-17,39;UBERON:0001890,7.55e-17,39;UBERON:0006240,7.55e-17,39;UBERON:0003528,4.58e-15,29;UBERON:0002791,4.58e-15,29;UBERON:0001893,4.58e-15,29;UBERON:0000956,1.66e-11,21;UBERON:0001869,1.66e-11,21;UBERON:0000203,1.66e-11,21;UBERON:0002619,1.32e-09,17;UBERON:0004111,3.73e-09,122;UBERON:0000025,4.25e-09,114;UBERON:0002021,2.99e-08,10;UBERON:0000411,2.99e-08,10;UBERON:0001950,2.99e-08,10;UBERON:0003076,1.23e-07,12;UBERON:0003057,1.23e-07,12
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972,119.084871702919,1.86817225651518,7.18244772121856,7.34154504742777,5.34834777550247,2.09613162627982,3.12533964365024,5.778414922842,7.2112270033613,10.9112531261217,8.59170519996911,9.12525479604863,7.9223063382152,8.33409416481953,5.8262888688431,6.60507892989553,8.09699275181225,7.88013416425017,8.68091492086673,5.76920261124629,8.68473628792944,8.22886205724997,9.76116933876356,9.77588378784016,7.26732083161643,9.03450051987174,6.59993941555077,7.86590283352922,6.05060336307039,8.41985505844343,8.41713407486608,8.30445126869219,7.88035859004508,9.00308294973317,8.6764631064141,7.33045121728337,10.4920442733937,4.91256377735358,5.80151845930405,5.35607329792761,5.51478547798789,5.79669589051054
|phase1_expression=11.3705681444404,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.809901069559304,1.39912375625629,0.473193248037357,0.548457734422955,1.69755860719212,14.9676190665883,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,6.79122982998222,14.0830441982647,8.50298109883741,8.78744730937887,13.2212331370513,13.9986421625363,8.62515386189829,0,0,0,1.80081605225163,0.85960031981627,2.57836046138721,9.3065571995415,11.6378015439847,9.50747105259269,27.4464070975997,17.7858959222228,0.899899717281399,0,0.7104801149461,3.29560121570245,4.99483796918021,14.8276145601123,14.3106294631592,17.0363218694619,21.9951257990929,23.6329338818226,8.69684674426174,4.50473713785711,6.43453150627015,40.7428759697738,47.2443150915195,40.5521247796483,13.0567424852892,9.14876436024097,14.5855743755893,33.5019598801657,33.2029939918691,37.5883689530953,31.2306300602088,30.0404246486107,16.4031512326265,1.21161909333094,2.64500460373749,0.289864488701678,0,0,0,0,0.448026887097336,3.37066608316204,0,0,0,7.46470124816407,0,0,0,0,0,0,3.53970027129086,4.14300613835475,4.00793775475027,3.99016251562112,4.26251669636998,2.99800146432876,2.71300752994721,3.64524992120685,0.502666365318702,0.988779870937496,2.60278842455841,2.65383165584962,3.23533699894818,3.5334642953663,1.93950101254089,0,116.526757210596,128.600277983461,2.55457055208591,0.599075622529601,0.599902730993408,0.127070227073065,52.4267237916879,45.7500602818627,8.16753288733619,90.562470820176,93.0804264682403,36.1551197533635,45.2653123959044,4.78645010096487,1.61729061793121,1.26361379216837,5.47148825304832,4.94457683258274,6.89706313300419,10.0834792690996,14.4676625122286,28.9835486384657,25.2384028961154,22.8632207925738,15.2634988736019,2.37124792226126,7.18603104637713,4.75068035242662,4.60311038097907,7.50727572909114,6.61679116392116,7.81972118350185,2.7864797354589,0,0,0,3.93538967817454,3.51789089971644,5.58192390529146,6.39210786080068,6.09969118416952,9.56456099901745,7.20855228726264,7.77992864058896,10.6256461554124,7.07607354627966,4.92502392237286,10.8632204791447,5.26319954731196,5.92785311285837,8.99183005694491,65.8207539005718,17.3908794920991,0.330418782983798,0.528901133327089,4.90562976231038,4.87697010906921,5.7990357594942,3.22693639397348,2.89091456998331,3.42406127002606,0.949058123089023,2.30578536613615,4.27269854960458,1.39269530428806,2.72949721966768,1.79763881730844,0.864552199498777,1.39398891278057,1.13800740571849,3.42745537829186,5.63538678365402,5.49858585182348,4.07300223052014,4.69909993265134,6.89278254654404,4.13308414342886,2.35498091762062,3.20832626196681,0,0.83422552858047,0.982794975566015,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.863088412352432,0.162135226775035,0.549122826376163,0,1.86070473834252,1.24815069245824,0.252578877947112,0,0,7.20537441649758,4.16881105895066,2.28150967018836,2.54617628662782,2.81628297946203,2.68010011906905,4.99891645860629,3.31727201358258,5.04432461139811,3.98636441367795,3.6674596791222,7.04612253277673,4.48980952851328,6.50920763616802,0,0,0.491764273019036,1.93155722413313,50.8945370261301,53.096894026268,0,2.01976741763498,20.5080342620567,17.9601822376454,24.5582673415391,11.9484398976276,9.13474563737816,14.1538265394416,19.8357243820698,20.1656541958805,27.6701444562566,36.3093087556642,4.68402281187286,3.5613120733451,4.72372182125371,13.0326397148303,0,3.8844901784797,2.72091201268276,2.45186603682668,1.47650946440386,5.84126781093462,5.68542244970086,8.36127577798263,8.91243445961803,2.52829406348653,1.05418608574999,2.06271086496374,15.3197822589205,6.12207719706455,4.39819524861365,6.64444808597936,6.91626911204867,6.95638388648075,9.70839221552514,5.17590413494819,0.23467170806371,0.21183207086382,3.08739757276947,2.63818004706368,9.04200789497071,4.76472106932431,1.90995750405018,2.46211349617592,1.1659233465194,51.3628086569112,3.41741761595705,1.857481811669,1.11116716421827,2.63715839806567,1.91371918809435,2.0590035588587,2.37969801991397,4.05859211738608,4.28419918793714,0,4.4287039101359,3.86306987541013,1.72808545314882,1.04544148007234,1.74690050996942,2.96701562046606,3.63675205191478,0.785267825952089,1.68499465279331,1.86401793926078,0,0.448549638131936,0.66183396182839,1.94451188344048,1.03327858782185,0.506868376472335,0.938857909166032,1.17183946359555,1.36317147753424,0.483168241652012,0.864090018773596,0.948033361884535,2.8381530140623,2.97861775777999,1.42912905275575,0.537080087002444,0,0.841368146639782,1.47689527174577,0.100966449948148,0.762068066549998,0.302478555410522,0.194915761479505,0.384847366561318,0.233753804363138,1.58711268530648,0.443971906748129,0,0.167884616364078,7.53439416725543,2.43987218086537,6.41030684935428,1.50057865355346,3.00943262421218,103.349587198923,92.9856977744497,105.412774472849,80.5991425191895,113.038615762156,135.215507632756,112.728757538712,101.772591928674,115.551314290972,119.084871702919,1.86817225651518,7.18244772121856,7.34154504742777,5.34834777550247,2.09613162627982,3.12533964365024,5.778414922842,7.2112270033613,10.9112531261217,8.59170519996911,9.12525479604863,7.9223063382152,8.33409416481953,5.8262888688431,6.60507892989553,8.09699275181225,7.88013416425017,8.68091492086673,5.76920261124629,8.68473628792944,8.22886205724997,9.76116933876356,9.77588378784016,7.26732083161643,9.03450051987174,6.59993941555077,7.86590283352922,6.05060336307039,8.41985505844343,8.41713407486608,8.30445126869219,7.88035859004508,9.00308294973317,8.6764631064141,7.33045121728337,10.4920442733937,4.91256377735358,5.80151845930405,5.35607329792761,5.51478547798789,5.79669589051054
|short_description=p1@Adam22
}}
}}

Latest revision as of 06:10, 26 September 2015

Short description:p1@Adam22
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Adam22_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000046838, ENSMUST00000078296, ENSMUST00000088744, ENSMUST00000088745, ENSMUST00000088746, ENSMUST00000088747, ENSMUST00000088752, ENSMUST00000088762, ENSMUST00000102987, ENSMUST00000115385, ENSMUST00000115388, ENSMUST00000164206, NM_001007220, NM_001007221, NM_001098225, uc008wjk.2, uc008wjv.1, uc008wjy.1, uc008wjz.1, uc008wkb.1_5end
EntrezGene:Adam22
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Adam22

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.40
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2116.53
cerebellum, neonate N30.CNhs11135.1395-42I2128.60
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A452.43
corpus striatum, adult.CNhs10487.19-21D845.75
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D590.56
cortex, neonate N30.CNhs11107.1392-42F293.08
diencephalon, adult.CNhs10482.20-12F236.16
diencephalon, neonate N30.CNhs11201.1388-42B245.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D414.47
eyeball, neonate N00.CNhs11207.633-15C628.98
eyeball, neonate N01.CNhs11140.1532-43E725.24
eyeball, neonate N02.CNhs11205.1551-44G822.86
eyeball, neonate N16.CNhs11188.777-19A215.26
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B57.82
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E310.63
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G110.86
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D28.99
hippocampus, adult.CNhs10478.13-16E865.82
hippocampus, neonate N00.CNhs11228.627-43G117.39
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D56.89
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C250.89
medulla oblongata, neonate N30.CNhs11200.1396-42A353.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.95
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.15
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.67
olfactory brain, adult.CNhs10489.18-22I936.31
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G613.03
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C951.36
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1103.35
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A292.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3105.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D780.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4113.04
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5135.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6112.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7101.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8115.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9119.08
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.50e-1544
neurectodermal cell1.50e-1544
neural cell2.22e-1543
neuron7.05e-1533
neuronal stem cell7.05e-1533
neuroblast7.05e-1533
electrically signaling cell7.05e-1533
electrically responsive cell3.54e-1139
electrically active cell3.54e-1139
CNS neuron (sensu Vertebrata)1.94e-1023
neuroblast (sensu Vertebrata)1.94e-1023

Uber anatomy
Ontology termp-valuen
central nervous system3.46e-3473
nervous system5.46e-3375
ectoderm-derived structure2.84e-3295
ectoderm2.84e-3295
presumptive ectoderm2.84e-3295
neurectoderm2.13e-2964
neural plate2.13e-2964
presumptive neural plate2.13e-2964
structure with developmental contribution from neural crest2.06e-2792
ecto-epithelium3.13e-2773
regional part of nervous system8.15e-2654
neural tube1.68e-2452
neural rod1.68e-2452
future spinal cord1.68e-2452
neural keel1.68e-2452
brain1.34e-2147
future brain1.34e-2147
regional part of brain5.61e-2146
pre-chordal neural plate2.21e-2049
gray matter1.04e-1734
anterior neural tube1.70e-1740
regional part of forebrain7.55e-1739
forebrain7.55e-1739
future forebrain7.55e-1739
brain grey matter4.58e-1529
regional part of telencephalon4.58e-1529
telencephalon4.58e-1529
cerebral cortex1.66e-1121
cerebral hemisphere1.66e-1121
pallium1.66e-1121
regional part of cerebral cortex1.32e-0917
anatomical conduit3.73e-09122
tube4.25e-09114
occipital lobe2.99e-0810
visual cortex2.99e-0810
neocortex2.99e-0810
posterior neural tube1.23e-0712
chordal neural plate1.23e-0712
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