FFCP PHASE1:Mm9::chr7:120909755..120909769,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:120909755..120909769,+
|short_description=p4@Spon1
|description=CAGE_peak_4_at_Spon1_5end
|association_with_transcript=67bp_to_ENSMUST00000084696_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233744 | |EntrezGene=233744 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1837 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYD7 | |UniProt=Q3UYD7 | ||
|association_with_transcript=67bp_to_ENSMUST00000084696_5end | |||
|cluster_id=chr7:120909755..120909769,+ | |||
|description=CAGE_peak_4_at_Spon1_5end | |||
|id=chr7:120909755..120909769,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.56e-07!33;CL:0000047!7.56e-07!33;CL:0000031!7.56e-07!33;CL:0000404!7.56e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-08,33;CL:0000047,1.10e-08,33;CL:0000031,1.10e-08,33;CL:0000404,1.10e-08,33;CL:0000393,1.40e-07,39;CL:0000211,1.40e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.81e-13!102;UBERON:0000924!7.81e-13!102;UBERON:0006601!7.81e-13!102;UBERON:0001017!6.15e-12!73;UBERON:0005743!6.15e-12!73;UBERON:0002346!9.42e-12!71;UBERON:0003075!9.42e-12!71;UBERON:0007284!9.42e-12!71;UBERON:0000073!5.43e-11!75;UBERON:0001016!5.43e-11!75;UBERON:0000033!5.10e-09!63;UBERON:0001049!9.08e-09!52;UBERON:0005068!9.08e-09!52;UBERON:0006241!9.08e-09!52;UBERON:0007135!9.08e-09!52;UBERON:0002020!2.78e-08!34;UBERON:0000955!5.56e-08!50;UBERON:0006238!5.56e-08!50;UBERON:0002616!1.32e-07!49;UBERON:0003056!1.45e-07!49;UBERON:0000025!2.29e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-19,73;UBERON:0001016,1.82e-18,75;UBERON:0004121,4.08e-17,95;UBERON:0000924,4.08e-17,95;UBERON:0006601,4.08e-17,95;UBERON:0000073,1.68e-15,54;UBERON:0002346,1.24e-14,64;UBERON:0003075,1.24e-14,64;UBERON:0007284,1.24e-14,64;UBERON:0010314,5.09e-14,92;UBERON:0001049,1.17e-13,52;UBERON:0005068,1.17e-13,52;UBERON:0006241,1.17e-13,52;UBERON:0007135,1.17e-13,52;UBERON:0010371,1.25e-12,73;UBERON:0000025,4.37e-12,114;UBERON:0002020,9.65e-11,34;UBERON:0004111,1.62e-10,122;UBERON:0000955,1.74e-10,47;UBERON:0006238,1.74e-10,47;UBERON:0002616,7.89e-10,46;UBERON:0003076,1.08e-08,12;UBERON:0003057,1.08e-08,12;UBERON:0003056,2.25e-08,49;UBERON:0003528,9.53e-08,29;UBERON:0002791,9.53e-08,29;UBERON:0001893,9.53e-08,29;UBERON:0000483,1.65e-07,174;UBERON:0003080,2.56e-07,40;UBERON:0000119,2.81e-07,176;UBERON:0002950,6.25e-07,4;UBERON:0001891,6.25e-07,4;UBERON:0009616,6.25e-07,4;UBERON:0010286,6.25e-07,4 | |||
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| ||
|short_description=p4@Spon1 | |||
}} | }} |
Latest revision as of 18:20, 25 September 2015
Short description: | p4@Spon1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Spon1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1837 |
Association with transcript: | 67bp_to_ENSMUST00000084696_5end |
EntrezGene: | Spon1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.10e-08 | 33 |
neuronal stem cell | 1.10e-08 | 33 |
neuroblast | 1.10e-08 | 33 |
electrically signaling cell | 1.10e-08 | 33 |
electrically responsive cell | 1.40e-07 | 39 |
electrically active cell | 1.40e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.76e-19 | 73 |
nervous system | 1.82e-18 | 75 |
ectoderm-derived structure | 4.08e-17 | 95 |
ectoderm | 4.08e-17 | 95 |
presumptive ectoderm | 4.08e-17 | 95 |
regional part of nervous system | 1.68e-15 | 54 |
neurectoderm | 1.24e-14 | 64 |
neural plate | 1.24e-14 | 64 |
presumptive neural plate | 1.24e-14 | 64 |
structure with developmental contribution from neural crest | 5.09e-14 | 92 |
neural tube | 1.17e-13 | 52 |
neural rod | 1.17e-13 | 52 |
future spinal cord | 1.17e-13 | 52 |
neural keel | 1.17e-13 | 52 |
ecto-epithelium | 1.25e-12 | 73 |
tube | 4.37e-12 | 114 |
gray matter | 9.65e-11 | 34 |
anatomical conduit | 1.62e-10 | 122 |
brain | 1.74e-10 | 47 |
future brain | 1.74e-10 | 47 |
regional part of brain | 7.89e-10 | 46 |
posterior neural tube | 1.08e-08 | 12 |
chordal neural plate | 1.08e-08 | 12 |
pre-chordal neural plate | 2.25e-08 | 49 |
brain grey matter | 9.53e-08 | 29 |
regional part of telencephalon | 9.53e-08 | 29 |
telencephalon | 9.53e-08 | 29 |
epithelium | 1.65e-07 | 174 |
anterior neural tube | 2.56e-07 | 40 |
cell layer | 2.81e-07 | 176 |
regional part of midbrain | 6.25e-07 | 4 |
midbrain | 6.25e-07 | 4 |
presumptive midbrain | 6.25e-07 | 4 |
midbrain neural tube | 6.25e-07 | 4 |