FFCP PHASE1:Mm9::chr7:17509250..17509375,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:17509250..17509375,-
|short_description=p3@Calm3
|description=CAGE_peak_3_at_Calm3_5end
|association_with_transcript=5bp_to_NM_007590,uc009fin.1_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12315 | |EntrezGene=12315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=P62204 | |UniProt=P62204 | ||
|association_with_transcript=5bp_to_NM_007590,uc009fin.1_5end | |||
|cluster_id=chr7:17509250..17509375,- | |||
|description=CAGE_peak_3_at_Calm3_5end | |||
|id=chr7:17509250..17509375,- | |||
|ontology_enrichment_celltype=CL:0000117!4.30e-13!23;CL:0000337!4.30e-13!23;CL:0000221!4.50e-13!44;CL:0000133!4.50e-13!44;CL:0002319!7.19e-13!43;CL:0000055!2.17e-11!50;CL:0000540!4.36e-10!33;CL:0000047!4.36e-10!33;CL:0000031!4.36e-10!33;CL:0000404!4.36e-10!33;CL:0000393!2.03e-09!39;CL:0000211!2.03e-09!39;CL:0002321!8.36e-08!70;CL:0000220!8.36e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-13,23;CL:0000337,4.30e-13,23;CL:0000221,4.50e-13,44;CL:0000133,4.50e-13,44;CL:0002319,7.19e-13,43;CL:0000540,4.36e-10,33;CL:0000047,4.36e-10,33;CL:0000031,4.36e-10,33;CL:0000404,4.36e-10,33;CL:0000393,2.03e-09,39;CL:0000211,2.03e-09,39;CL:0002321,8.36e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.76e-27!73;UBERON:0005743!2.76e-27!73;UBERON:0000073!1.86e-26!75;UBERON:0001016!1.86e-26!75;UBERON:0001049!1.55e-23!52;UBERON:0005068!1.55e-23!52;UBERON:0006241!1.55e-23!52;UBERON:0007135!1.55e-23!52;UBERON:0000955!4.91e-22!50;UBERON:0006238!4.91e-22!50;UBERON:0002616!1.53e-21!49;UBERON:0002020!7.43e-20!34;UBERON:0000033!1.57e-19!63;UBERON:0002346!2.09e-19!71;UBERON:0003075!2.09e-19!71;UBERON:0007284!2.09e-19!71;UBERON:0003080!1.14e-16!40;UBERON:0002791!1.24e-16!29;UBERON:0003528!1.24e-16!29;UBERON:0001893!1.24e-16!29;UBERON:0004121!3.18e-16!102;UBERON:0000924!3.18e-16!102;UBERON:0006601!3.18e-16!102;UBERON:0002780!3.76e-16!39;UBERON:0001890!3.76e-16!39;UBERON:0006240!3.76e-16!39;UBERON:0003056!7.19e-16!49;UBERON:0000956!2.81e-12!21;UBERON:0001869!2.81e-12!21;UBERON:0000203!2.81e-12!21;UBERON:0002619!9.64e-11!17;UBERON:0007811!5.34e-09!86;UBERON:0002021!5.75e-08!10;UBERON:0000411!5.75e-08!10;UBERON:0001950!5.75e-08!10;UBERON:0003076!1.48e-07!12;UBERON:0003057!1.48e-07!12;UBERON:0000153!6.13e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.76e-27,73;UBERON:0001016,1.86e-26,75;UBERON:0000073,6.49e-25,54;UBERON:0001049,1.55e-23,52;UBERON:0005068,1.55e-23,52;UBERON:0006241,1.55e-23,52;UBERON:0007135,1.55e-23,52;UBERON:0002346,6.22e-22,64;UBERON:0003075,6.22e-22,64;UBERON:0007284,6.22e-22,64;UBERON:0000955,3.67e-20,47;UBERON:0006238,3.67e-20,47;UBERON:0002020,7.43e-20,34;UBERON:0002616,1.12e-19,46;UBERON:0004121,1.05e-17,95;UBERON:0000924,1.05e-17,95;UBERON:0006601,1.05e-17,95;UBERON:0003080,1.14e-16,40;UBERON:0003528,1.24e-16,29;UBERON:0002791,1.24e-16,29;UBERON:0001893,1.24e-16,29;UBERON:0002780,3.76e-16,39;UBERON:0001890,3.76e-16,39;UBERON:0006240,3.76e-16,39;UBERON:0010371,6.07e-16,73;UBERON:0003056,7.19e-16,49;UBERON:0010314,6.70e-14,92;UBERON:0000956,2.81e-12,21;UBERON:0001869,2.81e-12,21;UBERON:0000203,2.81e-12,21;UBERON:0002619,9.64e-11,17;UBERON:0002021,5.75e-08,10;UBERON:0000411,5.75e-08,10;UBERON:0001950,5.75e-08,10;UBERON:0003076,1.48e-07,12;UBERON:0003057,1.48e-07,12 | |||
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| ||
|short_description=p3@Calm3 | |||
}} | }} |
Latest revision as of 07:23, 26 September 2015
Short description: | p3@Calm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Calm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 5bp_to_NM_007590, uc009fin.1_5end |
EntrezGene: | Calm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.30e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-13 | 23 |
ectodermal cell | 4.50e-13 | 44 |
neurectodermal cell | 4.50e-13 | 44 |
neural cell | 7.19e-13 | 43 |
neuron | 4.36e-10 | 33 |
neuronal stem cell | 4.36e-10 | 33 |
neuroblast | 4.36e-10 | 33 |
electrically signaling cell | 4.36e-10 | 33 |
electrically responsive cell | 2.03e-09 | 39 |
electrically active cell | 2.03e-09 | 39 |
embryonic cell | 8.36e-08 | 70 |