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FFCP PHASE1:Mm9::chr7:31076678..31076787,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:31076678..31076787,+
|DHSsupport=NA
|short_description=p1@Clip3
|DPIdataset=NA
|description=CAGE_peak_1_at_Clip3_5end
|association_with_transcript=0bp_to_ENSMUST00000014065,ENSMUST00000126216,ENSMUST00000145253,ENSMUST00000150892,NM_001081114,uc009gea.1_5end
|EntrezGene=76686
|EntrezGene=76686
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=B9EHT4,D3YXY6,D3Z115
|UniProt=B9EHT4,D3YXY6,D3Z115
|association_with_transcript=0bp_to_ENSMUST00000014065,ENSMUST00000126216,ENSMUST00000145253,ENSMUST00000150892,NM_001081114,uc009gea.1_5end
|cluster_id=chr7:31076678..31076787,+
|description=CAGE_peak_1_at_Clip3_5end
|id=chr7:31076678..31076787,+
|ontology_enrichment_celltype=CL:0002319!1.95e-18!43;CL:0000221!2.18e-18!44;CL:0000133!2.18e-18!44;CL:0000055!5.34e-18!50;CL:0000393!9.41e-16!39;CL:0000211!9.41e-16!39;CL:0000540!2.07e-15!33;CL:0000047!2.07e-15!33;CL:0000031!2.07e-15!33;CL:0000404!2.07e-15!33;CL:0000117!9.50e-13!23;CL:0000337!9.50e-13!23
|ontology_enrichment_celltype_v019_2=CL:0002319,1.81e-18,43;CL:0000221,2.02e-18,44;CL:0000133,2.02e-18,44;CL:0000393,8.82e-16,39;CL:0000211,8.82e-16,39;CL:0000540,1.94e-15,33;CL:0000047,1.94e-15,33;CL:0000031,1.94e-15,33;CL:0000404,1.94e-15,33;CL:0000117,9.02e-13,23;CL:0000337,9.02e-13,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.10e-39,73;UBERON:0001016,1.61e-38,75;UBERON:0004121,1.22e-35,95;UBERON:0000924,1.22e-35,95;UBERON:0006601,1.22e-35,95;UBERON:0002346,5.31e-32,64;UBERON:0003075,5.31e-32,64;UBERON:0007284,5.31e-32,64;UBERON:0000073,3.01e-30,54;UBERON:0001049,9.89e-29,52;UBERON:0005068,9.89e-29,52;UBERON:0006241,9.89e-29,52;UBERON:0007135,9.89e-29,52;UBERON:0010371,3.93e-28,73;UBERON:0000955,5.41e-26,47;UBERON:0006238,5.41e-26,47;UBERON:0002616,2.76e-25,46;UBERON:0010314,6.05e-24,92;UBERON:0003056,1.51e-23,49;UBERON:0003080,1.84e-21,40;UBERON:0002780,7.97e-21,39;UBERON:0001890,7.97e-21,39;UBERON:0006240,7.97e-21,39;UBERON:0002020,1.04e-19,34;UBERON:0003528,3.03e-17,29;UBERON:0002791,3.03e-17,29;UBERON:0001893,3.03e-17,29;UBERON:0000956,3.51e-13,21;UBERON:0001869,3.51e-13,21;UBERON:0000203,3.51e-13,21;UBERON:0002619,6.91e-11,17;UBERON:0000025,2.03e-08,114;UBERON:0004111,5.10e-08,122;UBERON:0003076,1.11e-07,12;UBERON:0003057,1.11e-07,12;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10
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9858154682,35.4719878602734,47.8025739337562,28.2966260384367,13.0408747049194,386.290260350074,350.307504981962,330.560711254532,339.410035128783,263.756770111697,316.510043006284,278.109270095504,335.489296402044,298.167705111607,337.579723262187,107.627479444791,92.9727955024402,60.2689628312094,58.1025053793223,78.1857096602374,71.8828118039555,47.7830464773473,57.2777459124126,53.2725887922413,50.0340479292319,52.9771736770601,50.7404858328545,52.532885690604,56.4061592686898,57.9523881762138,56.6789492626858,54.2338645421924,52.2783987456641,41.2085900803307,44.6012728007224,49.3731723434998,48.4508950814991,45.7797484698856,51.743324321109,40.9375804806688,47.2995658114472,38.597802276155,46.5633389244982,43.5931205445216,57.2365117090893,48.6403574309114,52.1088711766731,36.830793885272,48.0304207676495,51.6989717429459,100.92347348693,42.8094843455097,49.2054713770603,57.9603646168595,32.6475300296883,27.8241402744506
|phase1_expression=52.048375309058,0,0.909998478779072,0,0,0,0,6.84353614240354,0,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0.666219523631325,0.607425802169478,0,0.157731082679119,0,0,85.7236364722783,0,0,0.799962113967033,1.14704640533585,0,0,0.215471232685889,0.380046838912748,0.504060259519861,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,64.0814803495688,59.4068816946355,62.9565359914568,157.260660213956,115.771358038017,188.271058603442,156.904928552947,101.350169256762,129.377307928474,0,0.725362142011344,0,38.5889154053921,62.7508233465877,46.4104883049698,200.495612711861,185.675833724484,140.710571578372,86.7442002096978,70.25428889278,8.09909745553259,7.9109309005358,12.7886420690298,130.925248296543,191.724934355456,244.189036986465,254.351187816905,254.493203235172,199.670038098259,174.707015892726,198.55758552744,240.1887503717,213.258758493525,290.705925838386,391.3616912311,377.41125221059,183.71759880816,211.061993790759,172.943239024844,288.396037968427,164.326682129251,243.254810460682,204.766866904199,205.157592031507,187.517842500252,18.4014649799637,51.1619461922938,4.34796733052517,1.72084775396277,0,2.15881276655127,0.649776417447669,0,22.049773960685,28.8027245156918,21.822024386641,17.3136391510067,47.8867627240714,7.69958864485907,12.7402619853323,0,0,0,0,16.6708464389828,19.1614033898907,21.9694365815941,48.2289208409858,39.8849776588905,31.363707626824,25.4721262533932,47.2706602685533,11.4356598110005,7.41584903203122,30.5104643101014,5.30766331169925,27.662131341007,13.6921741445444,14.0613823409214,14.9113408974498,532.861050561016,513.144431692965,5.36459815938042,0,0,0,307.819763976911,313.845413533578,217.884646563707,376.155828896086,327.571500840153,354.27861597405,309.556329933282,84.3229932680619,16.4217201205323,2.0217820674694,56.1879755216885,81.8457586235406,46.2103229911281,89.4908785132586,76.708752278379,97.8364857796095,73.7935028840735,79.45906242665,123.142804471771,85.1493572084727,90.014494159882,92.5502913102371,62.2515880094313,60.6143003311803,51.8895728118028,48.7703663286826,54.3363548414486,0,0,0,28.3762308373638,30.7229138575236,19.6267646992506,29.5930919481513,15.5443743080449,17.4321837562737,11.6266972375204,16.901224288176,12.4938916332871,13.8230273927324,13.1333971263276,13.8627664323413,10.2339991197733,10.7579556492615,12.6154033634749,298.822016909625,235.651562348561,0,5.02456076660734,64.8396281627111,68.7420548706898,46.7788884599199,33.0760980382282,35.5804870151793,20.5443676201564,3.32170343081158,17.4580892007452,16.3367885720175,23.6758201728969,13.8424501854575,8.08937467788799,5.61958929674205,7.56736838366595,57.6590418897368,44.7854169430137,49.5914036961554,40.7302655690629,37.4328300233518,34.7172308457077,17.5165207834193,5.60918562322488,3.767969468193,4.68909222902842,0.889357881261447,12.1796927172749,9.82794975566015,2.9232074610031,4.26006254915856,3.37648023653384,5.0925170356284,3.74004978686054,5.35046248357617,1.09824565275233,14.3768206527355,4.46569137202204,2.49630138491648,1.76805214562978,1.61457672169721,1.4473305640901,7.39012760666419,38.2772651776379,39.4375242989703,34.7977425839136,22.7649540839847,19.9332446355761,22.6141458841713,15.8058254764817,22.2265553189729,23.4752571027701,22.1642128433907,8.02930242107116,6.90739927463582,6.07526046042349,0,0,7.37646409528554,9.10591262805617,323.509438825401,337.100810639176,61.1477346254999,22.7223834483936,67.2032507356627,73.0120451834714,115.251517787047,79.5766097181998,101.373396707489,126.818285793397,89.8679757718265,90.891571810418,101.19367115431,333.210205129414,32.0784592570687,94.5528355473125,84.3754449451524,71.1021230011628,6.63725691699814,32.2898246086125,22.9765903293211,16.4086419387631,23.9194533233426,21.213025208131,18.8652654012801,12.3601468022352,12.83390562185,12.3254335594968,5.27093042874994,12.3762651897824,89.1951767074925,75.9857816812129,74.5106018588666,74.1606141209309,91.1528800921286,96.4975303227202,84.0845495276838,136.704762152455,2.58138878870081,4.2366414172764,12.3495902910779,15.1695352706162,41.8192865142395,19.7826393764351,13.130957840345,9.02774948597837,11.9507143018239,335.805221941033,5.63873906632914,30.3388695905937,19.26023084645,2.0720530270516,3.55404992074665,3.20289442489132,1.35982743995084,1.95932033253121,1.24379976423981,10.5013767981662,77.8186544209593,45.9501995706678,38.5579066733831,33.8723039543439,30.3523963607187,19.9599232649535,28.0195214908889,13.6113089831695,11.1468877030942,7.45607175704311,9.01908701894705,54.2745062139643,35.9044924291902,62.2243802700953,55.0220848015135,54.065960157049,65.6026964029765,31.379256747392,26.5294141397048,9.90494895386625,10.9451402377989,1.26404448251271,22.0970484666279,12.7361586884386,5.45667456506739,6.98204113103178,5.36439657909415,1.80293174279953,2.36303243479324,1.61546319917036,1.752756553065,1.00826185136841,1.07203668813728,0.577271049841977,1.40252282617883,12.923631866067,8.21348027484039,4.21655126064536,1.17519231454855,44.8199858154682,35.4719878602734,47.8025739337562,28.2966260384367,13.0408747049194,386.290260350074,350.307504981962,330.560711254532,339.410035128783,263.756770111697,316.510043006284,278.109270095504,335.489296402044,298.167705111607,337.579723262187,107.627479444791,92.9727955024402,60.2689628312094,58.1025053793223,78.1857096602374,71.8828118039555,47.7830464773473,57.2777459124126,53.2725887922413,50.0340479292319,52.9771736770601,50.7404858328545,52.532885690604,56.4061592686898,57.9523881762138,56.6789492626858,54.2338645421924,52.2783987456641,41.2085900803307,44.6012728007224,49.3731723434998,48.4508950814991,45.7797484698856,51.743324321109,40.9375804806688,47.2995658114472,38.597802276155,46.5633389244982,43.5931205445216,57.2365117090893,48.6403574309114,52.1088711766731,36.830793885272,48.0304207676495,51.6989717429459,100.92347348693,42.8094843455097,49.2054713770603,57.9603646168595,32.6475300296883,27.8241402744506
|short_description=p1@Clip3
}}
}}

Latest revision as of 14:20, 26 September 2015

Short description:p1@Clip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clip3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000014065, ENSMUST00000126216, ENSMUST00000145253, ENSMUST00000150892, NM_001081114, uc009gea.1_5end
EntrezGene:Clip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G752.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A385.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D864.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D959.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B362.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7157.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2115.77
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8188.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3156.90
Mouse Astrocytes, donor2.CNhs12078.11552-120C4101.35
Mouse Astrocytes, donor3.CNhs12107.11633-122C4129.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C138.59
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E162.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C546.41
Mouse Granule cells, donor1.CNhs12131.11713-123C3200.50
Mouse Granule cells, donor2.CNhs12357.11731-123E3185.68
Mouse Granule cells, donor3.CNhs12108.11636-122C7140.71
Mouse Meningeal cells, donor1.CNhs12132.11716-123C686.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D170.25
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C8130.93
Mouse Microglia, donor2.CNhs12634.11736-123E8191.72
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5244.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5254.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9254.49
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1199.67
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5174.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2198.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2240.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6213.26
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3290.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3391.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7377.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4183.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4211.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8172.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4288.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5164.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6243.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6204.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6205.16
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1187.52
Mouse Schwann, donor1.CNhs12507.11728-123D918.40
Mouse Schwann, donor2.CNhs12573.11746-123F951.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A722.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G647.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.67
accessory axillary lymph node, adult.CNhs10475.1063-29H919.16
adrenal gland, adult.CNhs10508.49-24D721.97
adrenal gland, embryo E14.CNhs11038.406-44C548.23
adrenal gland, embryo E16.CNhs11004.1254-43D639.88
adrenal gland, embryo E17.CNhs11043.1263-45I131.36
adrenal gland, embryo E18.CNhs11026.1262-18F525.47
adrenal gland, neonate N00.CNhs11191.1311-23C147.27
adrenal gland, neonate N25.CNhs11223.1377-27I311.44
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H130.51
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F527.66
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B2532.86
cerebellum, neonate N30.CNhs11135.1395-42I2513.14
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4307.82
corpus striatum, adult.CNhs10487.19-21D8313.85
corpus striatum, neonate N00.CNhs11226.630-43F1217.88
cortex, adult.CNhs10473.12-14D5376.16
cortex, neonate N30.CNhs11107.1392-42F2327.57
diencephalon, adult.CNhs10482.20-12F2354.28
diencephalon, neonate N30.CNhs11201.1388-42B2309.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B184.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.42
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G456.19
eyeball, embryo E12.CNhs11016.345-16C681.85
eyeball, embryo E14.CNhs10521.399-16E246.21
eyeball, embryo E15.CNhs10593.426-16C989.49
eyeball, embryo E17.CNhs11023.1261-18D476.71
eyeball, neonate N00.CNhs11207.633-15C697.84
eyeball, neonate N01.CNhs11140.1532-43E773.79
eyeball, neonate N02.CNhs11205.1551-44G879.46
eyeball, neonate N16.CNhs11188.777-19A2123.14
forelimb, embryo E11.CNhs10596.335-25E285.15
forelimb, embryo E12.CNhs10600.359-14H290.01
forelimb, embryo E13.CNhs10589.384-1E292.55
forelimb, embryo E14.CNhs10577.413-26A862.25
forelimb, embryo E15.CNhs11007.437-20E760.61
forelimb, embryo E17.CNhs10598.1517-43C451.89
forelimb, embryo E18.CNhs11008.1520-43B548.77
gonad, embryo E13.CNhs11044.1564-45I654.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E928.38
heart, embryo E12.CNhs11015.353-12F530.72
heart, embryo E13.CNhs11013.376-3I919.63
heart, embryo E14.CNhs10597.403-26D429.59
heart, embryo E15.CNhs11017.431-16C815.54
heart, embryo E16.CNhs11021.457-17C617.43
heart, embryo E17.CNhs11025.479-18E511.63
heart, embryo E18.CNhs11030.1283-20G316.90
heart, neonate N00.CNhs11213.639-21E312.49
heart, neonate N03.CNhs11221.1349-25I213.82
heart, neonate N10.CNhs11118.749-24G113.13
heart, neonate N16.CNhs11209.782-15G113.86
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D212.62
hippocampus, adult.CNhs10478.13-16E8298.82
hippocampus, neonate N00.CNhs11228.627-43G1235.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I564.84
intestine, embryo E13.CNhs11010.381-16D568.74
intestine, embryo E15.CNhs10602.976-16D846.78
intestine, embryo E16.CNhs10585.463-22H433.08
intestine, embryo E17.CNhs10582.482-18D335.58
intestine, embryo E18.CNhs10526.1289-20F720.54
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E917.46
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F223.68
intestine, neonate N10.CNhs11098.755-23A513.84
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I957.66
kidney, embryo E15.CNhs10997.434-16F844.79
kidney, embryo E16.CNhs10584.464-22A549.59
kidney, embryo E17.CNhs11028.483-18I240.73
kidney, embryo E18.CNhs11001.1288-20C737.43
kidney, neonate N00.CNhs11214.646-21G734.72
kidney, neonate N10.CNhs11206.758-6D517.52
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F812.18
liver, embryo E13.CNhs10524.378-3H69.83
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G238.28
lung, embryo E14.CNhs10604.404-26F839.44
lung, embryo E15.CNhs11020.432-17C534.80
lung, embryo E16.CNhs10998.458-17B622.76
lung, embryo E17.CNhs10605.480-44A619.93
lung, embryo E18.CNhs10583.1287-20I622.61
lung, neonate N00.CNhs11224.640-42C615.81
lung, neonate N06.CNhs11212.683-20E522.23
lung, neonate N07.CNhs11111.715-19A323.48
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A48.03
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C2323.51
medulla oblongata, neonate N30.CNhs11200.1396-42A3337.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C761.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E167.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E273.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3115.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D779.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8101.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9126.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D489.87
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D590.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6101.19
olfactory brain, adult.CNhs10489.18-22I9333.21
ovary, adult.CNhs10507.91-2I732.08
ovary, embryo E18.CNhs11040.505-44H794.55
ovary, neonate N00.CNhs11217.1299-22I484.38
oviduct, adult pregnant day01.CNhs10500.988-6G671.10
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F432.29
pancreas, embryo E15.CNhs11042.1556-45F222.98
pancreas, embryo E16.CNhs11003.460-26E516.41
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I721.21
pancreas, neonate N00.CNhs11105.645-26G918.87
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G889.20
pituitary gland, embryo E12.CNhs11018.346-16E675.99
pituitary gland, embryo E13.CNhs11009.370-44C774.51
pituitary gland, embryo E14.CNhs11037.398-44A574.16
pituitary gland, embryo E15.CNhs10592.427-16B991.15
pituitary gland, embryo E16.CNhs11036.449-43F696.50
pituitary gland, embryo E17.CNhs11039.1265-44F584.08
pituitary gland, neonate N00.CNhs11190.1308-22E9136.70
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F812.35
skin, adult.CNhs10492.30-1C315.17
skin, neonate N00.CNhs11124.650-25G441.82
skin, neonate N03.CNhs11215.662-22H319.78
skin, neonate N06.CNhs11097.693-20I513.13
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C9335.81
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C130.34
spleen, embryo E18.CNhs11011.1271-21F219.26
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E377.82
stomach, embryo E15.CNhs10603.1252-16G845.95
stomach, embryo E16.CNhs11022.459-17D438.56
stomach, embryo E17.CNhs11006.1035-18D533.87
stomach, embryo E18.CNhs10999.1286-20C630.35
stomach, neonate N03.CNhs11193.1340-24B819.96
stomach, neonate N07.CNhs11210.718-18A928.02
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F554.27
testis, embryo E15.CNhs11034.443-27C535.90
testis, embryo E16.CNhs11033.470-26G562.22
testis, embryo E17.CNhs11029.486-18I555.02
testis, embryo E18.CNhs11027.503-18G554.07
testis, neonate N00.CNhs11189.1300-22B765.60
testis, neonate N07.CNhs11222.726-26I431.38
testis, neonate N10.CNhs11204.763-44D926.53
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I422.10
thymus, embryo E15.CNhs11005.430-45I212.74
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B412.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E444.82
uterus, adult pregnant day19.CNhs10497.590-15F535.47
uterus, adult.CNhs10509.92-27E547.80
vagina, adult.CNhs10502.89-27D528.30
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1386.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2350.31
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3330.56
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7339.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4263.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5316.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6278.11
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7335.49
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8298.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9337.58
whole body, embryo E11.CNhs11014.324-5I8107.63
whole body, embryo E12.CNhs10587.857-27C992.97
whole body, embryo E13.CNhs10512.372-23H260.27
whole body, embryo E14.5.CNhs10578.420-27D258.10
whole body, embryo E14.CNhs10519.395-14B178.19
whole body, embryo E16.CNhs10514.453-14F271.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G547.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G557.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G553.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G550.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G552.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G550.74
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G552.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G556.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G557.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G556.68
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G554.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G552.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G541.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G544.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G549.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G548.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G545.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G551.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G540.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G547.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G538.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G546.56
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G543.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G557.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G548.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G552.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G548.03
whole body, embryo E17.5.CNhs10513.490-9F951.70
whole body, embryo E17.CNhs10517.475-3I5100.92
whole body, embryo E18.CNhs10516.493-3B342.81
whole body, neonate N00.CNhs10525.657-19C249.21
whole body, neonate N01.CNhs10576.659-23C657.96
whole body, neonate N06.CNhs10515.692-21D132.65
whole body, neonate N10.CNhs10518.761-6B427.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.81e-1843
ectodermal cell2.02e-1844
neurectodermal cell2.02e-1844
electrically responsive cell8.82e-1639
electrically active cell8.82e-1639
neuron1.94e-1533
neuronal stem cell1.94e-1533
neuroblast1.94e-1533
electrically signaling cell1.94e-1533
CNS neuron (sensu Vertebrata)9.02e-1323
neuroblast (sensu Vertebrata)9.02e-1323

Uber anatomy
Ontology termp-valuen
central nervous system5.10e-3973
nervous system1.61e-3875
ectoderm-derived structure1.22e-3595
ectoderm1.22e-3595
presumptive ectoderm1.22e-3595
neurectoderm5.31e-3264
neural plate5.31e-3264
presumptive neural plate5.31e-3264
regional part of nervous system3.01e-3054
neural tube9.89e-2952
neural rod9.89e-2952
future spinal cord9.89e-2952
neural keel9.89e-2952
ecto-epithelium3.93e-2873
brain5.41e-2647
future brain5.41e-2647
regional part of brain2.76e-2546
structure with developmental contribution from neural crest6.05e-2492
pre-chordal neural plate1.51e-2349
anterior neural tube1.84e-2140
regional part of forebrain7.97e-2139
forebrain7.97e-2139
future forebrain7.97e-2139
gray matter1.04e-1934
brain grey matter3.03e-1729
regional part of telencephalon3.03e-1729
telencephalon3.03e-1729
cerebral cortex3.51e-1321
cerebral hemisphere3.51e-1321
pallium3.51e-1321
regional part of cerebral cortex6.91e-1117
tube2.03e-08114
anatomical conduit5.10e-08122
posterior neural tube1.11e-0712
chordal neural plate1.11e-0712
occipital lobe1.47e-0710
visual cortex1.47e-0710
neocortex1.47e-0710
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