FFCP PHASE1:Mm9::chr8:3676457..3676501,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:3676457..3676501,+
|short_description=p2@Trappc5
|description=CAGE_peak_2_at_Trappc5_5end
|association_with_transcript=0bp_to_NM_025701,uc009ksk.2_5end
|E...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66682 | |EntrezGene=66682 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQA1 | |UniProt=Q9CQA1 | ||
|association_with_transcript=0bp_to_NM_025701,uc009ksk.2_5end | |||
|cluster_id=chr8:3676457..3676501,+ | |||
|description=CAGE_peak_2_at_Trappc5_5end | |||
|id=chr8:3676457..3676501,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.76e-14!23;CL:0000337!7.76e-14!23;CL:0000221!8.36e-14!44;CL:0000133!8.36e-14!44;CL:0002319!1.40e-13!43;CL:0000540!1.94e-11!33;CL:0000047!1.94e-11!33;CL:0000031!1.94e-11!33;CL:0000404!1.94e-11!33;CL:0000055!1.07e-10!50;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-14,23;CL:0000337,7.76e-14,23;CL:0000221,8.36e-14,44;CL:0000133,8.36e-14,44;CL:0002319,1.40e-13,43;CL:0000540,1.94e-11,33;CL:0000047,1.94e-11,33;CL:0000031,1.94e-11,33;CL:0000404,1.94e-11,33;CL:0000393,1.63e-08,39;CL:0000211,1.63e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.98e-28!73;UBERON:0005743!1.98e-28!73;UBERON:0000073!5.87e-28!75;UBERON:0001016!5.87e-28!75;UBERON:0000033!4.26e-26!63;UBERON:0001049!2.02e-25!52;UBERON:0005068!2.02e-25!52;UBERON:0006241!2.02e-25!52;UBERON:0007135!2.02e-25!52;UBERON:0002346!4.31e-25!71;UBERON:0003075!4.31e-25!71;UBERON:0007284!4.31e-25!71;UBERON:0000955!3.68e-24!50;UBERON:0006238!3.68e-24!50;UBERON:0002616!6.63e-24!49;UBERON:0004121!1.42e-23!102;UBERON:0000924!1.42e-23!102;UBERON:0006601!1.42e-23!102;UBERON:0003056!2.64e-22!49;UBERON:0002020!2.86e-20!34;UBERON:0003080!5.93e-20!40;UBERON:0002780!1.79e-19!39;UBERON:0001890!1.79e-19!39;UBERON:0006240!1.79e-19!39;UBERON:0002791!1.70e-17!29;UBERON:0003528!1.70e-17!29;UBERON:0001893!1.70e-17!29;UBERON:0007811!3.97e-14!86;UBERON:0000956!6.77e-13!21;UBERON:0001869!6.77e-13!21;UBERON:0000203!6.77e-13!21;UBERON:0000153!9.28e-12!94;UBERON:0002619!6.72e-11!17;UBERON:0000025!2.84e-10!114;UBERON:0004111!1.42e-09!122;UBERON:0002021!2.80e-07!10;UBERON:0000411!2.80e-07!10;UBERON:0001950!2.80e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.98e-28,73;UBERON:0001016,5.87e-28,75;UBERON:0010314,9.63e-28,92;UBERON:0002346,1.84e-27,64;UBERON:0003075,1.84e-27,64;UBERON:0007284,1.84e-27,64;UBERON:0000073,6.45e-27,54;UBERON:0001049,2.02e-25,52;UBERON:0005068,2.02e-25,52;UBERON:0006241,2.02e-25,52;UBERON:0007135,2.02e-25,52;UBERON:0004121,6.19e-25,95;UBERON:0000924,6.19e-25,95;UBERON:0006601,6.19e-25,95;UBERON:0000955,7.37e-23,47;UBERON:0006238,7.37e-23,47;UBERON:0002616,1.31e-22,46;UBERON:0010371,1.55e-22,73;UBERON:0003056,2.64e-22,49;UBERON:0002020,2.86e-20,34;UBERON:0003080,5.93e-20,40;UBERON:0002780,1.79e-19,39;UBERON:0001890,1.79e-19,39;UBERON:0006240,1.79e-19,39;UBERON:0003528,1.70e-17,29;UBERON:0002791,1.70e-17,29;UBERON:0001893,1.70e-17,29;UBERON:0000956,6.77e-13,21;UBERON:0001869,6.77e-13,21;UBERON:0000203,6.77e-13,21;UBERON:0002619,6.72e-11,17;UBERON:0000025,2.84e-10,114;UBERON:0004111,1.42e-09,122;UBERON:0002021,2.80e-07,10;UBERON:0000411,2.80e-07,10;UBERON:0001950,2.80e-07,10 | |||
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| ||
|short_description=p2@Trappc5 | |||
}} | }} |
Latest revision as of 23:04, 1 October 2015
Short description: | p2@Trappc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trappc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_NM_025701, uc009ksk.2_5end |
EntrezGene: | Trappc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.76e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.76e-14 | 23 |
ectodermal cell | 8.36e-14 | 44 |
neurectodermal cell | 8.36e-14 | 44 |
neural cell | 1.40e-13 | 43 |
neuron | 1.94e-11 | 33 |
neuronal stem cell | 1.94e-11 | 33 |
neuroblast | 1.94e-11 | 33 |
electrically signaling cell | 1.94e-11 | 33 |
electrically responsive cell | 1.63e-08 | 39 |
electrically active cell | 1.63e-08 | 39 |