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(Created page with "{{f5samples |id=FF:13323-143B2 |name=Monocyte-derived macrophages response to udorn influenza infection, 00hr00min, donor3 (536_119:Ud_0h) |sample_id=13323 |rna_tube_id=143B2 ...")
 
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{{f5samples
{{f5samples
|id=FF:13323-143B2
|DRA_sample_Accession=CAGE@SAMD00004904
|name=Monocyte-derived macrophages response to udorn influenza infection, 00hr00min, donor3 (536_119:Ud_0h)
|accession_numbers=CAGE;DRX008598;DRR009470;DRZ000895;DRZ002280;DRZ012245;DRZ013630
|sample_id=13323
|ancestors_in_anatomy_facet=
|rna_tube_id=143B2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0000255,CL:0000235
|rna_box=143
|rna_position=B2
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=Subject_number_536_119
|sample_sex=n/a
|sample_age=adult
|sample_ethnicity=Caucasian
|rna_rin=
|rna_od260/230=0.74
|rna_od260/280=0.49
|sample_cell_type=HMDM
|sample_cell_line=Primary
|sample_collaboration=Baillie/Tomoiu/Fisher/Hume
|sample_experimental_condition=Ud 0h
|sample_disease=Healthy
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=9.55
|rna_concentration=318.22
|sample_note=
|profile_hcage=CNhs13650,LSID1059,release014,COMPLETED
|profile_cagescan=
|profile_srnaseq=
|profile_rnaseq=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000235,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000357,FF:0000086,FF:0000647,FF:0011215
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|donor= donor3 (536_119:Ud_0h)
|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.55!352.08!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.53!341.03!PLEK;;chr12:54778471..54778528,-!p1@ZNF385A!2.30!198.89!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.27!185.84!IRF8;;chr20:39317868..39317884,-!p1@MAFB!2.03!1186.33!MAFB;;chr7:115670804..115670825,-!p1@TFEC!2.02!103.46!TFEC;;chr10:64576105..64576133,-!p1@EGR2!1.85!140.63!EGR2;;chr11:47400062..47400077,-!p2@SPI1!1.78!59.77!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.68!258.66!NCOA4;;chr14:75988771..75988826,+!p1@BATF!1.66!59.27!BATF;;chr7:137620684..137620711,-!p4@CREB3L2!1.58!36.66!CREB3L2;;chr7:128577972..128578047,+!p1@IRF5!1.56!54.24!IRF5;;chr11:47279504..47279563,+!p1@NR1H3!1.55!76.34!NR1H3;;chr7:137620650..137620677,-!p3@CREB3L2!1.50!30.64!CREB3L2;;chr19:33793430..33793447,-!p1@CEBPA!1.49!121.55!CEBPA;;chr7:50344289..50344323,+!p1@IKZF1!1.46!28.13!IKZF1;;chr6:106534192..106534224,+!p1@PRDM1!1.37!61.78!PRDM1;;chr10:31288398..31288455,-!p2@ZNF438!1.34!24.11!ZNF438;;chr2:145277640..145277771,-!p1@ZEB2!1.31!255.15!ZEB2;;chr11:47399996..47400014,-!p4@SPI1!1.31!19.59!SPI1;;chr6:41691289..41691312,-!p9@TFEB!1.23!16.07!TFEB;;chr11:47399947..47399961,-!p3@SPI1!1.22!15.57!SPI1;;chr16:79634624..79634642,-!p1@MAF!1.20!57.26!MAF;;chr11:47400045..47400060,-!p6@SPI1!1.18!14.06!SPI1;;chr10:51572339..51572376,+!p4@NCOA4!1.16!30.14!NCOA4;;chr10:31288370..31288393,-!p3@ZNF438!1.16!13.56!ZNF438;;chr16:79634595..79634620,-!p2@MAF!1.15!24.11!MAF;;chr16:67198683..67198698,+!p2@HSF4!1.15!13.06!HSF4;;chr2:70142232..70142251,+!p1@MXD1!1.13!69.81!MXD1;;chr6:106534230..106534254,+!p2@PRDM1!1.13!31.64!PRDM1;;chr19:54041669..54041697,+!p2@ZNF331!1.13!12.56!ZNF331;;chr2:68592394..68592405,+!p2@PLEK!1.12!12.05!PLEK;;chr3:69788576..69788648,+!p1@MITF!1.10!61.28!MITF;;chr7:50343634..50343717,+!p2@IKZF1!1.10!11.55!IKZF1;;chr11:47400032..47400043,-!p5@SPI1!1.10!11.55!SPI1;;chr2:145277882..145277967,-!p3@ZEB2!1.07!18.58!ZEB2;;chr19:49140609..49140643,-!p1@DBP!1.05!58.76!DBP;;chr12:12764995..12765017,+!p3@CREBL2!1.05!14.57!CREBL2;;chr19:50432132..50432217,+!p2@ATF5!1.01!11.05!ATF5;;chr14:75988831..75988847,+!p2@BATF!1.00!9.04!BATF;;chr19:13213954..13214021,-!p4@LYL1!1.00!9.04!LYL1;;chr17:40440481..40440550,+!p1@STAT5A!0.96!60.77!STAT5A;;chr16:79634581..79634592,-!p4@MAF!0.96!8.04!MAF;;chr19:13213662..13213686,-!p1@LYL1!0.94!11.55!LYL1;;chr5:88178983..88179012,-!p1@MEF2C!0.93!60.77!MEF2C;;chr2:113999360..113999386,-!p4@PAX8!0.93!7.53!PAX8;;chr19:35759824..35759891,+!p1@USF2!0.91!233.05!USF2;;chrY:21906594..21906622,-!p1@KDM5D!0.90!7.03!KDM5D;;chr11:128563948..128564003,+!p1@FLI1!0.89!86.39!FLI1;;chrX:131623044..131623089,-!p1@MBNL3!0.89!29.13!MBNL3;;chr9:137217986..137218049,+!p3@RXRA!0.89!20.09!RXRA;;chrY:2803415..2803468,+!p1@ZFY!0.88!6.53!ZFY;;chr12:26277956..26277980,-!p1@BHLHE41!0.87!24.11!BHLHE41;;chr6:44233252..44233296,-!p1@NFKBIE!0.85!64.29!NFKBIE;;chr13:41593425..41593480,-!p1@ELF1!0.85!40.68!ELF1;;chr16:79633894..79633954,-!p3@MAF!0.85!12.05!MAF;;chr2:145275982..145276003,-!p7@ZEB2!0.85!6.03!ZEB2;;chr6:106535598..106535637,+!p7@PRDM1!0.85!6.03!PRDM1;;chr13:27998831..27998851,+!p2@GTF3A!0.84!38.17!GTF3A;;chr18:52989031..52989079,-!p2@TCF4!0.84!14.57!TCF4;;chr12:12764947..12764986,+!p2@CREBL2!0.82!11.55!CREBL2;;chr7:149470641..149470694,-!p1@ZNF467!0.79!25.11!ZNF467;;chr13:27998854..27998866,+!p3@GTF3A!0.79!11.05!GTF3A;;chr19:13213704..13213726,-!p3@LYL1!0.79!7.03!LYL1;;chr16:31885093..31885165,+!p1@ZNF267!0.78!83.37!ZNF267;;chr1:221053049..221053075,+!p3@HLX!0.78!9.04!HLX;;chr1:78050720..78050734,-!p9@ZZZ3!0.78!5.02!ZZZ3;;chr10:94449703..94449718,+!p1@HHEX!0.77!20.59!HHEX;;chr3:185826855..185826911,-!p1@ETV5!0.76!143.14!ETV5;;chr14:62162258..62162269,+!p2@HIF1A!0.76!50.73!HIF1A;;chr19:35759976..35760042,+!p4@USF2!0.76!27.12!USF2;;chr1:25256756..25256774,-!p1@RUNX3!0.76!9.54!RUNX3;;chr2:70167296..70167306,+!p3@MXD1!0.76!7.53!MXD1;;chr3:12330560..12330579,+!p1@PPARG!0.76!5.52!PPARG;;chr16:67198633..67198671,+!p1@HSF4!0.74!4.52!HSF4;;chr22:38597987..38598021,+!p2@MAFF!0.71!28.63!MAFF;;chr3:12329358..12329393,+!p3@PPARG!0.71!11.05!PPARG;;chr1:158979792..158979814,+!p2@IFI16!0.70!43.19!IFI16;;chr14:62203595..62203676,+!p4@HIF1A!0.70!8.04!HIF1A;;chr12:26277929..26277955,-!p3@BHLHE41!0.70!6.03!BHLHE41;;chr6:144385698..144385742,-!p2@PLAGL1!0.70!5.02!PLAGL1;;chr18:52989001..52989030,-!p10@TCF4!0.70!4.52!TCF4;;chr10:3827371..3827386,-!p2@KLF6!0.68!36.16!KLF6;;chr5:321810..321877,+!p1@AHRR!0.68!13.56!AHRR;;chr1:158979872..158979898,+!p3@IFI16!0.68!13.06!IFI16;;chr19:42636586..42636607,-!p1@POU2F2!0.68!11.55!POU2F2;;chr19:45252008..45252024,+!p2@BCL3!0.67!13.56!BCL3;;chr2:113057415..113057477,+!p3@ZC3H6!0.67!5.02!ZC3H6;;chr14:89628064..89628109,-!p4@FOXN3!0.66!8.04!FOXN3;;chr14:75745523..75745537,+!p1@FOS!0.65!484.68!FOS;;chr5:76383017..76383068,-!p1@ZBED3!0.65!14.57!ZBED3;;chr10:94449675..94449694,+!p2@HHEX!0.65!10.55!HHEX;;chr2:145282041..145282092,-!p8@ZEB2!0.65!5.52!ZEB2;;chr2:145275947..145275981,-!p10@ZEB2!0.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Line 66: Line 42:
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|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;13323
|name=Monocyte-derived macrophages response to udorn influenza infection
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|rna_box=143
|rna_catalog_number=
|rna_concentration=318.22
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=0.74
|rna_od260/280=0.49
|rna_position=B2
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=143B2
|rna_weight_ug=9.55
|sample_age=adult
|sample_category=time courses
|sample_cell_catalog=
|sample_cell_line=Primary
|sample_cell_lot=
|sample_cell_type=HMDM
|sample_collaboration=Baillie/Tomoiu/Fisher/Hume
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=Healthy
|sample_donor(cell lot)=Subject_number_536_119
|sample_ethnicity=Caucasian
|sample_experimental_condition=Ud 0h
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.28966482851438e-239!GO:0005737;cytoplasm;9.11814830399179e-168!GO:0043227;membrane-bound organelle;1.31134496705062e-146!GO:0043231;intracellular membrane-bound organelle;3.35330343305647e-146!GO:0044444;cytoplasmic part;3.10747819009812e-141!GO:0043226;organelle;3.93384874980203e-131!GO:0043229;intracellular organelle;2.02819369849347e-130!GO:0044422;organelle part;1.23998199935654e-108!GO:0044446;intracellular organelle part;1.05283663754295e-106!GO:0032991;macromolecular complex;9.0022733866679e-78!GO:0044237;cellular metabolic process;7.83121945836569e-75!GO:0044238;primary metabolic process;8.05116769225141e-72!GO:0005739;mitochondrion;9.01190738689708e-72!GO:0030529;ribonucleoprotein complex;1.14317876915809e-63!GO:0043170;macromolecule metabolic process;3.27016186604457e-59!GO:0031090;organelle membrane;1.07379872928932e-58!GO:0003723;RNA binding;5.55244874839763e-55!GO:0043233;organelle lumen;4.38817490256799e-53!GO:0031974;membrane-enclosed lumen;4.38817490256799e-53!GO:0044429;mitochondrial part;7.43844324131495e-50!GO:0009058;biosynthetic process;1.94122244642351e-48!GO:0006412;translation;1.25573201534261e-47!GO:0044428;nuclear part;2.11936642017279e-47!GO:0019538;protein metabolic process;8.494168057668e-47!GO:0033036;macromolecule localization;1.29551461545264e-45!GO:0015031;protein transport;4.57762753493048e-45!GO:0005515;protein binding;4.59916850036913e-45!GO:0045184;establishment of protein localization;3.04514455250935e-44!GO:0044260;cellular macromolecule metabolic process;1.87465727265846e-43!GO:0008104;protein localization;4.11654511432448e-43!GO:0031967;organelle envelope;1.75082928292396e-42!GO:0044267;cellular protein metabolic process;1.79682351729504e-42!GO:0009059;macromolecule biosynthetic process;2.61166556692882e-42!GO:0031975;envelope;3.83256768480629e-42!GO:0044249;cellular biosynthetic process;1.50290023658436e-41!GO:0043234;protein complex;5.17938079592547e-41!GO:0005840;ribosome;2.0242235266482e-39!GO:0005829;cytosol;8.05854312490157e-36!GO:0005634;nucleus;9.05957613641938e-35!GO:0003735;structural constituent of ribosome;4.40331415220118e-34!GO:0005740;mitochondrial envelope;4.93962739003341e-34!GO:0006396;RNA processing;5.99518817069761e-34!GO:0031966;mitochondrial membrane;5.78078327468736e-32!GO:0033279;ribosomal subunit;1.45064178642834e-31!GO:0046907;intracellular transport;4.9945114618866e-31!GO:0006886;intracellular protein transport;2.35523118146692e-29!GO:0019866;organelle inner membrane;4.22334418742667e-29!GO:0016071;mRNA metabolic process;8.93663228664605e-29!GO:0031981;nuclear lumen;9.18501573502689e-28!GO:0005743;mitochondrial inner membrane;1.68405198776462e-27!GO:0016043;cellular component organization and biogenesis;3.2158188108756e-27!GO:0006119;oxidative phosphorylation;3.11778343419548e-26!GO:0065003;macromolecular complex assembly;4.98737894779375e-26!GO:0008380;RNA splicing;5.14903366667718e-26!GO:0006397;mRNA processing;1.00922906343447e-24!GO:0051649;establishment of cellular localization;2.34248967975379e-24!GO:0051641;cellular localization;1.03716185169452e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.33750454148462e-23!GO:0043283;biopolymer metabolic process;1.89731715525165e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.32524821478427e-23!GO:0022607;cellular component assembly;4.75835366244124e-22!GO:0051186;cofactor metabolic process;6.74597529336405e-22!GO:0005773;vacuole;1.29281623759478e-21!GO:0012505;endomembrane system;1.45416095735099e-21!GO:0010467;gene expression;3.66571919646851e-21!GO:0044445;cytosolic part;1.01225280858554e-20!GO:0044455;mitochondrial membrane part;1.98303716141458e-20!GO:0000323;lytic vacuole;3.08101809069617e-20!GO:0005764;lysosome;3.08101809069617e-20!GO:0048770;pigment granule;1.72401831473185e-19!GO:0042470;melanosome;1.72401831473185e-19!GO:0005681;spliceosome;4.01617362065638e-19!GO:0031980;mitochondrial lumen;6.27002127577052e-19!GO:0005759;mitochondrial matrix;6.27002127577052e-19!GO:0012501;programmed cell death;8.70875486769311e-19!GO:0006915;apoptosis;9.7564894001285e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.61998801193822e-18!GO:0044248;cellular catabolic process;3.46423202137579e-18!GO:0005654;nucleoplasm;6.66662862652012e-18!GO:0008219;cell death;9.58196989658371e-18!GO:0016265;death;9.58196989658371e-18!GO:0006732;coenzyme metabolic process;1.25065882858941e-17!GO:0005746;mitochondrial respiratory chain;1.25065882858941e-17!GO:0022618;protein-RNA complex assembly;1.2745711468733e-17!GO:0016192;vesicle-mediated transport;1.32314943184768e-17!GO:0005783;endoplasmic reticulum;2.69292510559975e-17!GO:0015935;small ribosomal subunit;4.08332099634106e-17!GO:0006996;organelle organization and biogenesis;5.56884069395134e-17!GO:0044265;cellular macromolecule catabolic process;5.8088622037066e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.29335611471522e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.52017751907855e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.85734631418787e-16!GO:0016462;pyrophosphatase activity;2.98709101186019e-16!GO:0050136;NADH dehydrogenase (quinone) activity;9.66036019499254e-16!GO:0003954;NADH dehydrogenase activity;9.66036019499254e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.66036019499254e-16!GO:0044432;endoplasmic reticulum part;9.66036019499254e-16!GO:0015934;large ribosomal subunit;1.42548183771045e-15!GO:0005794;Golgi apparatus;1.45735430717003e-15!GO:0000166;nucleotide binding;2.49801142897187e-15!GO:0017111;nucleoside-triphosphatase activity;3.37628444059354e-15!GO:0009057;macromolecule catabolic process;8.06707010092736e-15!GO:0006259;DNA metabolic process;8.71654648287407e-15!GO:0006457;protein folding;9.4565712210517e-15!GO:0043285;biopolymer catabolic process;1.32069185434882e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.34256449794517e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.35025168824874e-14!GO:0016874;ligase activity;1.58219559966605e-14!GO:0006605;protein targeting;2.67246548441806e-14!GO:0042775;organelle ATP synthesis coupled electron transport;3.39945184651076e-14!GO:0042773;ATP synthesis coupled electron transport;3.39945184651076e-14!GO:0044451;nucleoplasm part;4.52816281962514e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.51343322585193e-14!GO:0045271;respiratory chain complex I;5.51343322585193e-14!GO:0005747;mitochondrial respiratory chain complex I;5.51343322585193e-14!GO:0016787;hydrolase activity;7.3473696900181e-14!GO:0006512;ubiquitin cycle;9.03928694631023e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.76112868578558e-13!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.66082360570082e-13!GO:0051188;cofactor biosynthetic process;9.66608869702633e-13!GO:0008135;translation factor activity, nucleic acid binding;9.66608869702633e-13!GO:0008134;transcription factor binding;1.07339024409757e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.16661933199826e-12!GO:0005789;endoplasmic reticulum membrane;1.41430853551479e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.61561136874909e-12!GO:0009056;catabolic process;1.63547031280893e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.72102964744682e-12!GO:0044257;cellular protein catabolic process;1.86454315007492e-12!GO:0006413;translational initiation;2.16872649707893e-12!GO:0019941;modification-dependent protein catabolic process;2.68632471236411e-12!GO:0043632;modification-dependent macromolecule catabolic process;2.68632471236411e-12!GO:0006163;purine nucleotide metabolic process;3.18924643866135e-12!GO:0009150;purine ribonucleotide metabolic process;3.21308835258493e-12!GO:0005761;mitochondrial ribosome;3.7621604029501e-12!GO:0000313;organellar ribosome;3.7621604029501e-12!GO:0006511;ubiquitin-dependent protein catabolic process;4.07904075405315e-12!GO:0009259;ribonucleotide metabolic process;4.30699038527091e-12!GO:0048193;Golgi vesicle transport;6.07635035392484e-12!GO:0009152;purine ribonucleotide biosynthetic process;6.55120906248666e-12!GO:0006164;purine nucleotide biosynthetic process;7.1796806457124e-12!GO:0009055;electron carrier activity;7.1796806457124e-12!GO:0005730;nucleolus;8.0001662334813e-12!GO:0005768;endosome;1.02320822869288e-11!GO:0015078;hydrogen ion transmembrane transporter activity;1.12810802749266e-11!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.12810802749266e-11!GO:0042981;regulation of apoptosis;1.1441981671906e-11!GO:0009260;ribonucleotide biosynthetic process;1.7443749496547e-11!GO:0019829;cation-transporting ATPase activity;1.75961980713521e-11!GO:0043067;regulation of programmed cell death;1.86540686396406e-11!GO:0017076;purine nucleotide binding;2.04929413253415e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.38652085773634e-11!GO:0003743;translation initiation factor activity;2.87405512580418e-11!GO:0032553;ribonucleotide binding;2.91603142674389e-11!GO:0032555;purine ribonucleotide binding;2.91603142674389e-11!GO:0030163;protein catabolic process;3.15162811791345e-11!GO:0043412;biopolymer modification;3.16629656443715e-11!GO:0015986;ATP synthesis coupled proton transport;3.23683787381502e-11!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.23683787381502e-11!GO:0051082;unfolded protein binding;3.93220652154632e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.47865578125219e-11!GO:0006950;response to stress;8.66123844708019e-11!GO:0006913;nucleocytoplasmic transport;1.28811701994561e-10!GO:0006446;regulation of translational initiation;1.49795512041245e-10!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.77433481612727e-10!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.77433481612727e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.91808116669471e-10!GO:0016887;ATPase activity;2.04455996059164e-10!GO:0009142;nucleoside triphosphate biosynthetic process;2.25535646209309e-10!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.25535646209309e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.29375556847157e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.3138978320283e-10!GO:0009144;purine nucleoside triphosphate metabolic process;2.3138978320283e-10!GO:0051169;nuclear transport;2.45249315417216e-10!GO:0009108;coenzyme biosynthetic process;2.50195028294251e-10!GO:0009199;ribonucleoside triphosphate metabolic process;2.74999369913684e-10!GO:0005774;vacuolar membrane;3.33150970488141e-10!GO:0042623;ATPase activity, coupled;3.76131220997757e-10!GO:0006464;protein modification process;3.98038184978533e-10!GO:0016604;nuclear body;4.89899448652156e-10!GO:0006754;ATP biosynthetic process;5.76632740882098e-10!GO:0006753;nucleoside phosphate metabolic process;5.76632740882098e-10!GO:0009141;nucleoside triphosphate metabolic process;6.38838626867163e-10!GO:0016469;proton-transporting two-sector ATPase complex;6.61421819145381e-10!GO:0005635;nuclear envelope;7.07778183713508e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.77520682605877e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;7.77520682605877e-10!GO:0000375;RNA splicing, via transesterification reactions;7.77520682605877e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.77520682605877e-10!GO:0043228;non-membrane-bound organelle;1.18074444368027e-09!GO:0043232;intracellular non-membrane-bound organelle;1.18074444368027e-09!GO:0046034;ATP metabolic process;1.22499187715244e-09!GO:0005770;late endosome;1.31399342742472e-09!GO:0006974;response to DNA damage stimulus;1.32237592403417e-09!GO:0016491;oxidoreductase activity;1.53796675363511e-09!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.05810604341869e-09!GO:0044437;vacuolar part;2.11698690196889e-09!GO:0005765;lysosomal membrane;2.14379287384391e-09!GO:0043069;negative regulation of programmed cell death;4.17869948431766e-09!GO:0008565;protein transporter activity;4.78786216571201e-09!GO:0043066;negative regulation of apoptosis;5.74944481798459e-09!GO:0009060;aerobic respiration;6.89580141253893e-09!GO:0051246;regulation of protein metabolic process;7.07036881171368e-09!GO:0009117;nucleotide metabolic process;1.16390046071056e-08!GO:0044440;endosomal part;1.46413709322064e-08!GO:0010008;endosome membrane;1.46413709322064e-08!GO:0008639;small protein conjugating enzyme activity;1.64234316786267e-08!GO:0030554;adenyl nucleotide binding;2.18162754157745e-08!GO:0032559;adenyl ribonucleotide binding;2.40366290724458e-08!GO:0016607;nuclear speck;2.65461211782063e-08!GO:0005524;ATP binding;2.74587957735299e-08!GO:0006916;anti-apoptosis;2.97110378650056e-08!GO:0007243;protein kinase cascade;3.21459421695728e-08!GO:0043687;post-translational protein modification;3.44247751762513e-08!GO:0006091;generation of precursor metabolites and energy;3.47075825297015e-08!GO:0005793;ER-Golgi intermediate compartment;3.55619539909891e-08!GO:0004842;ubiquitin-protein ligase activity;3.68309645060643e-08!GO:0007049;cell cycle;4.02591546472751e-08!GO:0017038;protein import;4.43341968056272e-08!GO:0003676;nucleic acid binding;4.5802998080773e-08!GO:0006461;protein complex assembly;4.61429110652832e-08!GO:0009615;response to virus;4.92656090871455e-08!GO:0044262;cellular carbohydrate metabolic process;6.01888710773526e-08!GO:0019787;small conjugating protein ligase activity;7.35903106189843e-08!GO:0045333;cellular respiration;9.97686499753626e-08!GO:0006752;group transfer coenzyme metabolic process;1.06443079288372e-07!GO:0031982;vesicle;1.18664294629382e-07!GO:0006281;DNA repair;1.4072826221155e-07!GO:0044453;nuclear membrane part;2.05533560389463e-07!GO:0042254;ribosome biogenesis and assembly;2.70989080821288e-07!GO:0006099;tricarboxylic acid cycle;2.71876188023247e-07!GO:0046356;acetyl-CoA catabolic process;2.71876188023247e-07!GO:0008654;phospholipid biosynthetic process;2.85078941666667e-07!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.02712042632846e-07!GO:0015399;primary active transmembrane transporter activity;3.02712042632846e-07!GO:0031965;nuclear membrane;3.36998571679563e-07!GO:0003712;transcription cofactor activity;4.61391721183486e-07!GO:0006888;ER to Golgi vesicle-mediated transport;4.62709959081968e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.65170726353433e-07!GO:0051187;cofactor catabolic process;5.77882184278607e-07!GO:0009719;response to endogenous stimulus;6.08800527089798e-07!GO:0031410;cytoplasmic vesicle;6.60714621897915e-07!GO:0006084;acetyl-CoA metabolic process;6.95580835512501e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.69115580040127e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.01978763815066e-06!GO:0006818;hydrogen transport;1.10273966753702e-06!GO:0044431;Golgi apparatus part;1.11505195035107e-06!GO:0031988;membrane-bound vesicle;1.27289104822391e-06!GO:0016881;acid-amino acid ligase activity;1.34034261302873e-06!GO:0022890;inorganic cation transmembrane transporter activity;1.35709104279987e-06!GO:0007040;lysosome organization and biogenesis;1.41209115460937e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;1.46010077797966e-06!GO:0048523;negative regulation of cellular process;1.47642240085928e-06!GO:0006793;phosphorus metabolic process;1.60895725512866e-06!GO:0006796;phosphate metabolic process;1.60895725512866e-06!GO:0015992;proton transport;2.08498295916467e-06!GO:0006417;regulation of translation;2.18551691523113e-06!GO:0016740;transferase activity;2.27713784903364e-06!GO:0006399;tRNA metabolic process;2.38957881762951e-06!GO:0030120;vesicle coat;2.38957881762951e-06!GO:0030662;coated vesicle membrane;2.38957881762951e-06!GO:0045259;proton-transporting ATP synthase complex;2.42450390265942e-06!GO:0009109;coenzyme catabolic process;2.69040897903021e-06!GO:0048475;coated membrane;2.85556202235254e-06!GO:0030117;membrane coat;2.85556202235254e-06!GO:0044255;cellular lipid metabolic process;3.40719126916552e-06!GO:0005643;nuclear pore;3.72696062114604e-06!GO:0031902;late endosome membrane;3.77152542293282e-06!GO:0006323;DNA packaging;4.03148146253849e-06!GO:0051170;nuclear import;4.21118140580908e-06!GO:0016023;cytoplasmic membrane-bound vesicle;4.59807146160293e-06!GO:0043492;ATPase activity, coupled to movement of substances;4.6757422699241e-06!GO:0007033;vacuole organization and biogenesis;4.80729938567994e-06!GO:0009165;nucleotide biosynthetic process;5.22140470800955e-06!GO:0016044;membrane organization and biogenesis;5.31608611965379e-06!GO:0016310;phosphorylation;5.43746109182721e-06!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;5.79023156760746e-06!GO:0005975;carbohydrate metabolic process;6.31196198091963e-06!GO:0032446;protein modification by small protein conjugation;6.76389878846095e-06!GO:0009967;positive regulation of signal transduction;7.13001186763951e-06!GO:0008026;ATP-dependent helicase activity;7.18583688739219e-06!GO:0031252;leading edge;7.35920929685887e-06!GO:0006606;protein import into nucleus;7.4945957151411e-06!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;8.18653016749184e-06!GO:0004298;threonine endopeptidase activity;8.42871741166415e-06!GO:0051726;regulation of cell cycle;8.4426898891418e-06!GO:0016567;protein ubiquitination;8.55861408191216e-06!GO:0007242;intracellular signaling cascade;8.67906859887255e-06!GO:0030532;small nuclear ribonucleoprotein complex;9.31895209461717e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.5413179881286e-06!GO:0000074;regulation of progression through cell cycle;9.66730886899493e-06!GO:0007005;mitochondrion organization and biogenesis;9.74561720211581e-06!GO:0065002;intracellular protein transport across a membrane;9.74561720211581e-06!GO:0046930;pore complex;1.02273865351416e-05!GO:0065009;regulation of a molecular function;1.13454435060007e-05!GO:0022402;cell cycle process;1.17423588757357e-05!GO:0006643;membrane lipid metabolic process;1.22670604325345e-05!GO:0048519;negative regulation of biological process;1.29590710556634e-05!GO:0008047;enzyme activator activity;1.3366351659203e-05!GO:0016070;RNA metabolic process;1.45215863081652e-05!GO:0051276;chromosome organization and biogenesis;1.50524578380123e-05!GO:0003697;single-stranded DNA binding;1.57715023117064e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.7934381815814e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.7934381815814e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.7934381815814e-05!GO:0050657;nucleic acid transport;1.82990413197681e-05!GO:0051236;establishment of RNA localization;1.82990413197681e-05!GO:0050658;RNA transport;1.82990413197681e-05!GO:0004386;helicase activity;1.92874989745309e-05!GO:0006333;chromatin assembly or disassembly;2.00769462579524e-05!GO:0005694;chromosome;2.00769462579524e-05!GO:0005525;GTP binding;2.34510837989923e-05!GO:0006403;RNA localization;2.35859166970827e-05!GO:0043566;structure-specific DNA binding;2.64343740200559e-05!GO:0043038;amino acid activation;2.70342225388727e-05!GO:0006418;tRNA aminoacylation for protein translation;2.70342225388727e-05!GO:0043039;tRNA aminoacylation;2.70342225388727e-05!GO:0008610;lipid biosynthetic process;3.60641594677699e-05!GO:0000139;Golgi membrane;3.70191942436438e-05!GO:0006613;cotranslational protein targeting to membrane;4.10573997651839e-05!GO:0006364;rRNA processing;4.10573997651839e-05!GO:0016072;rRNA metabolic process;4.28645945556367e-05!GO:0031326;regulation of cellular biosynthetic process;4.9817525463768e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.45484303841305e-05!GO:0000245;spliceosome assembly;5.64430468643406e-05!GO:0032940;secretion by cell;5.68825804621833e-05!GO:0005741;mitochondrial outer membrane;5.72636112822036e-05!GO:0006629;lipid metabolic process;5.89765992115193e-05!GO:0019867;outer membrane;6.21361995950491e-05!GO:0065004;protein-DNA complex assembly;7.45028845841787e-05!GO:0016779;nucleotidyltransferase activity;7.64430262120506e-05!GO:0019752;carboxylic acid metabolic process;7.69852768272154e-05!GO:0044427;chromosomal part;7.70062027201494e-05!GO:0006082;organic acid metabolic process;8.0375454939739e-05!GO:0009889;regulation of biosynthetic process;8.10268343392574e-05!GO:0043065;positive regulation of apoptosis;8.5084616357788e-05!GO:0031968;organelle outer membrane;8.59314393290899e-05!GO:0000151;ubiquitin ligase complex;8.60807817571882e-05!GO:0045454;cell redox homeostasis;9.64277785102997e-05!GO:0006650;glycerophospholipid metabolic process;9.93838567789873e-05!GO:0000785;chromatin;0.000101590217693099!GO:0046474;glycerophospholipid biosynthetic process;0.000107025828735247!GO:0005798;Golgi-associated vesicle;0.000118304787960972!GO:0005762;mitochondrial large ribosomal subunit;0.000118813803458554!GO:0000315;organellar large ribosomal subunit;0.000118813803458554!GO:0006672;ceramide metabolic process;0.000120081163860663!GO:0043068;positive regulation of programmed cell death;0.00012299957970711!GO:0046519;sphingoid metabolic process;0.000131915619136867!GO:0005769;early endosome;0.000144415440984615!GO:0016197;endosome transport;0.000145359575558614!GO:0006644;phospholipid metabolic process;0.000156445920224339!GO:0046467;membrane lipid biosynthetic process;0.000158259262043327!GO:0016568;chromatin modification;0.000164909658700414!GO:0005885;Arp2/3 protein complex;0.000167812271144326!GO:0045045;secretory pathway;0.000168401346868965!GO:0045786;negative regulation of progression through cell cycle;0.000168401346868965!GO:0019899;enzyme binding;0.000172141010082018!GO:0006612;protein targeting to membrane;0.000186666654463154!GO:0007034;vacuolar transport;0.000194207460999807!GO:0001726;ruffle;0.000201278936932383!GO:0003924;GTPase activity;0.000211763270086585!GO:0048522;positive regulation of cellular process;0.000215058085036636!GO:0007264;small GTPase mediated signal transduction;0.000215574863420691!GO:0003713;transcription coactivator activity;0.000234996538752634!GO:0046483;heterocycle metabolic process;0.000238696155876985!GO:0005096;GTPase activator activity;0.000249022129488843!GO:0022415;viral reproductive process;0.000256072360165582!GO:0051028;mRNA transport;0.000257841226830887!GO:0032561;guanyl ribonucleotide binding;0.000286975255802768!GO:0019001;guanyl nucleotide binding;0.000286975255802768!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000309125657257431!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00031302987956245!GO:0003724;RNA helicase activity;0.000337979692141433!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000358469109125308!GO:0006366;transcription from RNA polymerase II promoter;0.000376830092176936!GO:0005788;endoplasmic reticulum lumen;0.000387989523046691!GO:0015980;energy derivation by oxidation of organic compounds;0.000429717150214272!GO:0006334;nucleosome assembly;0.000473617415964461!GO:0006897;endocytosis;0.000478401205550815!GO:0010324;membrane invagination;0.000478401205550815!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000480459259022518!GO:0030149;sphingolipid catabolic process;0.000503561887399883!GO:0016853;isomerase activity;0.00053386085706125!GO:0031497;chromatin assembly;0.000565093861059926!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000575538541060225!GO:0033116;ER-Golgi intermediate compartment membrane;0.000607655843342274!GO:0006260;DNA replication;0.000658366137797432!GO:0051168;nuclear export;0.000737704527048851!GO:0006917;induction of apoptosis;0.00073828565287492!GO:0030384;phosphoinositide metabolic process;0.000760251624999969!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00081386629133767!GO:0046489;phosphoinositide biosynthetic process;0.00081773305370826!GO:0019318;hexose metabolic process;0.000828686568921695!GO:0000314;organellar small ribosomal subunit;0.000830773974124819!GO:0005763;mitochondrial small ribosomal subunit;0.000830773974124819!GO:0006767;water-soluble vitamin metabolic process;0.000864182801642273!GO:0006066;alcohol metabolic process;0.000896378064642855!GO:0006733;oxidoreduction coenzyme metabolic process;0.000905441702957237!GO:0051427;hormone receptor binding;0.000908216832305098!GO:0043623;cellular protein complex assembly;0.000985871119036765!GO:0012502;induction of programmed cell death;0.00101690762995668!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00111086341029071!GO:0005996;monosaccharide metabolic process;0.00111087856714182!GO:0009607;response to biotic stimulus;0.00125198783957358!GO:0008632;apoptotic program;0.00126231100013657!GO:0019377;glycolipid catabolic process;0.00128229817198417!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0013385102007328!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0013385102007328!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0013385102007328!GO:0050790;regulation of catalytic activity;0.00135369445861018!GO:0006118;electron transport;0.00136404113032694!GO:0043021;ribonucleoprotein binding;0.00152685140872218!GO:0007006;mitochondrial membrane organization and biogenesis;0.00156226620366615!GO:0006778;porphyrin metabolic process;0.0016552266791863!GO:0033013;tetrapyrrole metabolic process;0.0016552266791863!GO:0035257;nuclear hormone receptor binding;0.0016630996282898!GO:0048518;positive regulation of biological process;0.00174244898541439!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.001897042899798!GO:0006401;RNA catabolic process;0.00197935903731334!GO:0006414;translational elongation;0.00200147497145855!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00202984994805254!GO:0007041;lysosomal transport;0.0020676254149632!GO:0004177;aminopeptidase activity;0.00212826653860257!GO:0000278;mitotic cell cycle;0.00225580549945919!GO:0030176;integral to endoplasmic reticulum membrane;0.00232085459487036!GO:0051336;regulation of hydrolase activity;0.00232327565874767!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00239115137567694!GO:0000287;magnesium ion binding;0.00240612631450163!GO:0003729;mRNA binding;0.00244279925542397!GO:0019058;viral infectious cycle;0.0027144629355546!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0027144629355546!GO:0031072;heat shock protein binding;0.00272502901217229!GO:0019079;viral genome replication;0.00279904369756421!GO:0016564;transcription repressor activity;0.00296906341206189!GO:0003714;transcription corepressor activity;0.00305081490279624!GO:0050794;regulation of cellular process;0.00311914202534207!GO:0051789;response to protein stimulus;0.00317624441609024!GO:0006986;response to unfolded protein;0.00317624441609024!GO:0005048;signal sequence binding;0.0032092858034836!GO:0030867;rough endoplasmic reticulum membrane;0.00324743679241673!GO:0006891;intra-Golgi vesicle-mediated transport;0.0033155325053655!GO:0030695;GTPase regulator activity;0.00342818836157612!GO:0008186;RNA-dependent ATPase activity;0.0034603982599252!GO:0030984;kininogen binding;0.00350980425401201!GO:0004213;cathepsin B activity;0.00350980425401201!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00354159429348794!GO:0015002;heme-copper terminal oxidase activity;0.00354159429348794!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00354159429348794!GO:0004129;cytochrome-c oxidase activity;0.00354159429348794!GO:0015036;disulfide oxidoreductase activity;0.00367306680552875!GO:0016798;hydrolase activity, acting on glycosyl bonds;0.00378451141639806!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00378676475835205!GO:0019843;rRNA binding;0.00387105154712724!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0039707188996736!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0039707188996736!GO:0008234;cysteine-type peptidase activity;0.00399085185563854!GO:0030658;transport vesicle membrane;0.00419285513765946!GO:0042168;heme metabolic process;0.00428234143222912!GO:0046479;glycosphingolipid catabolic process;0.00435606401359822!GO:0003725;double-stranded RNA binding;0.00436824252216056!GO:0050662;coenzyme binding;0.00445079511601643!GO:0004197;cysteine-type endopeptidase activity;0.00461957677777549!GO:0019362;pyridine nucleotide metabolic process;0.00462573152060016!GO:0042158;lipoprotein biosynthetic process;0.00467854020012963!GO:0048471;perinuclear region of cytoplasm;0.00468607975367758!GO:0051920;peroxiredoxin activity;0.00474341988113007!GO:0030027;lamellipodium;0.00474341988113007!GO:0006497;protein amino acid lipidation;0.0047562836901558!GO:0043681;protein import into mitochondrion;0.00483110567124712!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00492391989916859!GO:0048487;beta-tubulin binding;0.00492694512708022!GO:0046822;regulation of nucleocytoplasmic transport;0.00515429378895986!GO:0006383;transcription from RNA polymerase III promoter;0.00529249053216639!GO:0006769;nicotinamide metabolic process;0.00531574697360781!GO:0003690;double-stranded DNA binding;0.00537924401469867!GO:0043488;regulation of mRNA stability;0.00539594305053723!GO:0043487;regulation of RNA stability;0.00539594305053723!GO:0006402;mRNA catabolic process;0.00541536479394091!GO:0004576;oligosaccharyl transferase activity;0.00541607045367997!GO:0046466;membrane lipid catabolic process;0.00571207248161357!GO:0043087;regulation of GTPase activity;0.00580688531530324!GO:0016126;sterol biosynthetic process;0.00604285009633979!GO:0005667;transcription factor complex;0.00620170241644037!GO:0008250;oligosaccharyl transferase complex;0.00642930972243574!GO:0004185;serine carboxypeptidase activity;0.00673737705523047!GO:0002376;immune system process;0.00701261062345432!GO:0051252;regulation of RNA metabolic process;0.00726521086085903!GO:0006749;glutathione metabolic process;0.0074665486248697!GO:0007265;Ras protein signal transduction;0.00746796875764998!GO:0006779;porphyrin biosynthetic process;0.00771210571367904!GO:0033014;tetrapyrrole biosynthetic process;0.00771210571367904!GO:0030118;clathrin coat;0.00787678398424465!GO:0030663;COPI coated vesicle membrane;0.0080646045806067!GO:0030126;COPI vesicle coat;0.0080646045806067!GO:0030127;COPII vesicle coat;0.0083670929410046!GO:0012507;ER to Golgi transport vesicle membrane;0.0083670929410046!GO:0006807;nitrogen compound metabolic process;0.00838118620405036!GO:0004004;ATP-dependent RNA helicase activity;0.00843452084321978!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00851688835647251!GO:0005083;small GTPase regulator activity;0.00862118132886799!GO:0006607;NLS-bearing substrate import into nucleus;0.00865387133857154!GO:0016563;transcription activator activity;0.00865969605857522!GO:0000786;nucleosome;0.00874380627190647!GO:0030133;transport vesicle;0.00968201094366941!GO:0009966;regulation of signal transduction;0.00974986390916187!GO:0030660;Golgi-associated vesicle membrane;0.00980445211219206!GO:0006979;response to oxidative stress;0.0101642557451068!GO:0016860;intramolecular oxidoreductase activity;0.0101642557451068!GO:0000096;sulfur amino acid metabolic process;0.0104425625939277!GO:0030134;ER to Golgi transport vesicle;0.0106375797443488!GO:0048500;signal recognition particle;0.0106485665122554!GO:0017166;vinculin binding;0.0109718864101006!GO:0006007;glucose catabolic process;0.0110411410734798!GO:0006740;NADPH regeneration;0.0112509476623068!GO:0006098;pentose-phosphate shunt;0.0112509476623068!GO:0042802;identical protein binding;0.0112946543246466!GO:0006509;membrane protein ectodomain proteolysis;0.0113361766914254!GO:0033619;membrane protein proteolysis;0.0113361766914254!GO:0006006;glucose metabolic process;0.0116128824529061!GO:0005905;coated pit;0.0116885009606349!GO:0048468;cell development;0.0117288346321504!GO:0004192;cathepsin D activity;0.0117780931216365!GO:0006665;sphingolipid metabolic process;0.0125095771251428!GO:0008139;nuclear localization sequence binding;0.0125095771251428!GO:0006302;double-strand break repair;0.0127056180844527!GO:0031324;negative regulation of cellular metabolic process;0.0127643364975937!GO:0030036;actin cytoskeleton organization and biogenesis;0.0128075042575054!GO:0031901;early endosome membrane;0.0128075042575054!GO:0006516;glycoprotein catabolic process;0.0129263645474996!GO:0008320;protein transmembrane transporter activity;0.0132878264109285!GO:0030137;COPI-coated vesicle;0.0133823615386736!GO:0048002;antigen processing and presentation of peptide antigen;0.0139996503478002!GO:0016125;sterol metabolic process;0.0144786519693192!GO:0006689;ganglioside catabolic process;0.0144786519693192!GO:0004553;hydrolase activity, hydrolyzing O-glycosyl compounds;0.0144959529236587!GO:0005758;mitochondrial intermembrane space;0.0146754996654872!GO:0005813;centrosome;0.014760916465872!GO:0043284;biopolymer biosynthetic process;0.0150577207366786!GO:0035035;histone acetyltransferase binding;0.0150968701885643!GO:0051287;NAD binding;0.0151680007868759!GO:0005684;U2-dependent spliceosome;0.0154528202396124!GO:0006506;GPI anchor biosynthetic process;0.0157281724163895!GO:0006914;autophagy;0.0157759306902911!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0157922711235584!GO:0045047;protein targeting to ER;0.0157922711235584!GO:0003899;DNA-directed RNA polymerase activity;0.0159518234304617!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0162324324520949!GO:0051235;maintenance of localization;0.0162675266264609!GO:0005777;peroxisome;0.0163526484628666!GO:0042579;microbody;0.0163526484628666!GO:0004229;gelatinase B activity;0.0166845178385951!GO:0006954;inflammatory response;0.0168029731580088!GO:0003711;transcription elongation regulator activity;0.0170662596509471!GO:0030145;manganese ion binding;0.0171464521995533!GO:0022406;membrane docking;0.0174174411905114!GO:0048278;vesicle docking;0.0174174411905114!GO:0006458;'de novo' protein folding;0.0179522792648394!GO:0051084;'de novo' posttranslational protein folding;0.0179522792648394!GO:0008637;apoptotic mitochondrial changes;0.0184296744811181!GO:0005099;Ras GTPase activator activity;0.0184489059006783!GO:0005791;rough endoplasmic reticulum;0.0185695482260663!GO:0030880;RNA polymerase complex;0.0186423643295196!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0187321925400811!GO:0033033;negative regulation of myeloid cell apoptosis;0.0187830269278233!GO:0001803;regulation of type III hypersensitivity;0.0187830269278233!GO:0032733;positive regulation of interleukin-10 production;0.0187830269278233!GO:0033025;regulation of mast cell apoptosis;0.0187830269278233!GO:0001805;positive regulation of type III hypersensitivity;0.0187830269278233!GO:0033023;mast cell homeostasis;0.0187830269278233!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0187830269278233!GO:0033032;regulation of myeloid cell apoptosis;0.0187830269278233!GO:0001802;type III hypersensitivity;0.0187830269278233!GO:0033028;myeloid cell apoptosis;0.0187830269278233!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0187830269278233!GO:0033026;negative regulation of mast cell apoptosis;0.0187830269278233!GO:0033024;mast cell apoptosis;0.0187830269278233!GO:0006595;polyamine metabolic process;0.018808873769049!GO:0032787;monocarboxylic acid metabolic process;0.0188849928959794!GO:0018196;peptidyl-asparagine modification;0.0188960567980741!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0188960567980741!GO:0006783;heme biosynthetic process;0.0189456142230532!GO:0005637;nuclear inner membrane;0.0189456142230532!GO:0044438;microbody part;0.0189456142230532!GO:0044439;peroxisomal part;0.0189456142230532!GO:0051087;chaperone binding;0.0196709077028045!GO:0006626;protein targeting to mitochondrion;0.0196709077028045!GO:0006790;sulfur metabolic process;0.0197949429103754!GO:0051540;metal cluster binding;0.0197949429103754!GO:0051536;iron-sulfur cluster binding;0.0197949429103754!GO:0050749;apolipoprotein E receptor binding;0.019799380678613!GO:0006839;mitochondrial transport;0.0204937012668807!GO:0006635;fatty acid beta-oxidation;0.0204943848730371!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0214481833045732!GO:0006904;vesicle docking during exocytosis;0.0216148063028201!GO:0030132;clathrin coat of coated pit;0.0221402144539694!GO:0000209;protein polyubiquitination;0.0221952733927406!GO:0006611;protein export from nucleus;0.0224679027254528!GO:0030518;steroid hormone receptor signaling pathway;0.0224679027254528!GO:0008312;7S RNA binding;0.0224793953707855!GO:0051090;regulation of transcription factor activity;0.0224857954401666!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0225069729290964!GO:0030119;AP-type membrane coat adaptor complex;0.0225335978146434!GO:0042157;lipoprotein metabolic process;0.0225930571783643!GO:0046983;protein dimerization activity;0.0226767328072232!GO:0051098;regulation of binding;0.0230201327884003!GO:0051452;cellular pH reduction;0.0234250873076405!GO:0051453;regulation of cellular pH;0.0234250873076405!GO:0045851;pH reduction;0.0234250873076405!GO:0031970;organelle envelope lumen;0.023537279108867!GO:0044275;cellular carbohydrate catabolic process;0.0235578424908256!GO:0006505;GPI anchor metabolic process;0.0236322536469106!GO:0016859;cis-trans isomerase activity;0.0237200982805149!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0240374656640451!GO:0051219;phosphoprotein binding;0.0240978598003119!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0240978598003119!GO:0010257;NADH dehydrogenase complex assembly;0.0240978598003119!GO:0033108;mitochondrial respiratory chain complex assembly;0.0240978598003119!GO:0006955;immune response;0.0240978598003119!GO:0004518;nuclease activity;0.024278296058304!GO:0000049;tRNA binding;0.0245504545993609!GO:0007050;cell cycle arrest;0.0249599569888958!GO:0006739;NADP metabolic process;0.02583587014807!GO:0032428;beta-N-acetylgalactosaminidase activity;0.0259046881950192!GO:0030290;sphingolipid activator protein activity;0.0259046881950192!GO:0015631;tubulin binding;0.0264768756984399!GO:0030041;actin filament polymerization;0.0266417065587766!GO:0009112;nucleobase metabolic process;0.0266417065587766!GO:0050811;GABA receptor binding;0.0273213709953152!GO:0006487;protein amino acid N-linked glycosylation;0.0273213709953152!GO:0009308;amine metabolic process;0.0273213709953152!GO:0031903;microbody membrane;0.0274506585641492!GO:0005778;peroxisomal membrane;0.0274506585641492!GO:0051101;regulation of DNA binding;0.0277998130779908!GO:0008033;tRNA processing;0.0280632149273511!GO:0051092;activation of NF-kappaB transcription factor;0.0280632149273511!GO:0032507;maintenance of cellular protein localization;0.0282290260141393!GO:0000118;histone deacetylase complex;0.0283488867068038!GO:0018193;peptidyl-amino acid modification;0.0285604600010072!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0287372874625224!GO:0006310;DNA recombination;0.0287372874625224!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0289415719517207!GO:0016584;nucleosome positioning;0.029222449541252!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.029222449541252!GO:0012506;vesicle membrane;0.0292775665329815!GO:0000303;response to superoxide;0.029626376369865!GO:0030503;regulation of cell redox homeostasis;0.0304304415098656!GO:0050789;regulation of biological process;0.0307700705272622!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0308207519587436!GO:0000428;DNA-directed RNA polymerase complex;0.0308207519587436!GO:0030131;clathrin adaptor complex;0.0312030188627119!GO:0022403;cell cycle phase;0.03122834264799!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.031277466981062!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.031277466981062!GO:0009126;purine nucleoside monophosphate metabolic process;0.031277466981062!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.031277466981062!GO:0051223;regulation of protein transport;0.031536274893724!GO:0016251;general RNA polymerase II transcription factor activity;0.031550356167887!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0318318133353719!GO:0032318;regulation of Ras GTPase activity;0.0319149030025945!GO:0044452;nucleolar part;0.0320017220832925!GO:0006631;fatty acid metabolic process;0.0321314915034386!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0321481374670218!GO:0030029;actin filament-based process;0.0321481374670218!GO:0015923;mannosidase activity;0.0322885035474692!GO:0000059;protein import into nucleus, docking;0.0322885035474692!GO:0006405;RNA export from nucleus;0.0323387968286376!GO:0006518;peptide metabolic process;0.0326086483467661!GO:0043022;ribosome binding;0.0334511980471176!GO:0004448;isocitrate dehydrogenase activity;0.0335914846455062!GO:0016408;C-acyltransferase activity;0.0337140526894749!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0342256786493591!GO:0035258;steroid hormone receptor binding;0.0347703537169457!GO:0051881;regulation of mitochondrial membrane potential;0.0349145616236389!GO:0045309;protein phosphorylated amino acid binding;0.0350746459016322!GO:0031625;ubiquitin protein ligase binding;0.0353021881495014!GO:0005869;dynactin complex;0.0354638619291286!GO:0051539;4 iron, 4 sulfur cluster binding;0.0355172225463118!GO:0016363;nuclear matrix;0.0355672582525832!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.035641293497612!GO:0032763;regulation of mast cell cytokine production;0.0361693323291963!GO:0032762;mast cell cytokine production;0.0361693323291963!GO:0006261;DNA-dependent DNA replication;0.0366797668355028!GO:0030508;thiol-disulfide exchange intermediate activity;0.0368830824285854!GO:0008383;manganese superoxide dismutase activity;0.0370847849481251!GO:0001315;age-dependent response to reactive oxygen species;0.0370847849481251!GO:0016272;prefoldin complex;0.0374359812776804!GO:0008629;induction of apoptosis by intracellular signals;0.0374907207303341!GO:0005784;translocon complex;0.0375980882973592!GO:0016788;hydrolase activity, acting on ester bonds;0.0381724814957869!GO:0009161;ribonucleoside monophosphate metabolic process;0.0381724814957869!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0381724814957869!GO:0009100;glycoprotein metabolic process;0.0382225524437299!GO:0045185;maintenance of protein localization;0.0382416694587717!GO:0005815;microtubule organizing center;0.0383103354065578!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0383371189175832!GO:0042987;amyloid precursor protein catabolic process;0.0384243920863009!GO:0048037;cofactor binding;0.0393656364737556!GO:0015035;protein disulfide oxidoreductase activity;0.0394758191816462!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0396020401046828!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0402077573102997!GO:0000087;M phase of mitotic cell cycle;0.0402934314944984!GO:0001887;selenium metabolic process;0.0403221550996949!GO:0046456;icosanoid biosynthetic process;0.0403400930553084!GO:0007021;tubulin folding;0.0409500645457615!GO:0019747;regulation of isoprenoid metabolic process;0.0411556357353734!GO:0042364;water-soluble vitamin biosynthetic process;0.0413883552547681!GO:0016741;transferase activity, transferring one-carbon groups;0.0414518321389465!GO:0006213;pyrimidine nucleoside metabolic process;0.0414518321389465!GO:0005484;SNAP receptor activity;0.041752988988476!GO:0007042;lysosomal lumen acidification;0.0418301666461057!GO:0030659;cytoplasmic vesicle membrane;0.0418708888624776!GO:0007162;negative regulation of cell adhesion;0.0418919497458407!GO:0006013;mannose metabolic process;0.0424562574350675!GO:0042585;germinal vesicle;0.0427920239179106!GO:0004563;beta-N-acetylhexosaminidase activity;0.0429933401369535!GO:0051085;chaperone cofactor-dependent protein folding;0.0429933401369535!GO:0009116;nucleoside metabolic process;0.0429933401369535!GO:0008180;signalosome;0.0438251317657939!GO:0008538;proteasome activator activity;0.043843626389115!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0439969035441312!GO:0030125;clathrin vesicle coat;0.0445107345097518!GO:0030665;clathrin coated vesicle membrane;0.0445107345097518!GO:0006289;nucleotide-excision repair;0.0446348586733489!GO:0006695;cholesterol biosynthetic process;0.0446683251131448!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0449800447822017!GO:0046813;virion attachment, binding of host cell surface receptor;0.0449800447822017!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0449800447822017!GO:0051651;maintenance of cellular localization;0.0450021853802562!GO:0031124;mRNA 3'-end processing;0.0453440744136059!GO:0005832;chaperonin-containing T-complex;0.0466561019322879!GO:0009892;negative regulation of metabolic process;0.0466568947803183!GO:0045947;negative regulation of translational initiation;0.0467039589373364!GO:0031529;ruffle organization and biogenesis;0.0469463768298027!GO:0008624;induction of apoptosis by extracellular signals;0.0476453196161821!GO:0007067;mitosis;0.0476585931830586!GO:0009124;nucleoside monophosphate biosynthetic process;0.0476585931830586!GO:0009123;nucleoside monophosphate metabolic process;0.0476585931830586!GO:0001784;phosphotyrosine binding;0.0477032961344717!GO:0000305;response to oxygen radical;0.0477652246159539!GO:0031301;integral to organelle membrane;0.0480409609953682!GO:0001573;ganglioside metabolic process;0.0481694454807146!GO:0003684;damaged DNA binding;0.0483035029868916!GO:0015248;sterol transporter activity;0.0489949911292658!GO:0007030;Golgi organization and biogenesis;0.0491382339348149!GO:0004674;protein serine/threonine kinase activity;0.0496242021755257!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0498249140404371
|sample_id=13323
|sample_note=
|sample_sex=n/a
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|time= 00hr00min
|timecourse=Macrophage_influenza_infection
|top_motifs=SREBF1,2:2.86463353766;TLX2:1.59923976343;FOXD3:1.58344092272;IKZF2:1.5018309169;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.44548667887;NR6A1:1.41566190045;DMAP1_NCOR{1,2}_SMARC:1.32052115943;TFCP2:1.16994007611;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.14884470859;ARID5B:1.13224182214;SPIB:1.10211859874;ESRRA:1.09530979188;NFE2L1:1.0480935094;FOXP3:1.03377368976;PAX1,9:1.00649140776;EN1,2:1.00109723572;IRF7:0.950660605448;SPI1:0.949812147698;IRF1,2:0.922146752081;RXR{A,B,G}:0.774370966592;HMX1:0.761733994579;NKX2-2,8:0.760733150278;TFAP4:0.723828146822;ESR1:0.710701151701;PAX8:0.693980136238;EBF1:0.662512133137;NFE2L2:0.652211144943;HNF4A_NR2F1,2:0.649671505144;OCT4_SOX2{dimer}:0.628550106934;NFIL3:0.621689115659;PAX4:0.571964241684;HES1:0.568161090746;PAX2:0.549509946123;RXRA_VDR{dimer}:0.525789468364;LHX3,4:0.525642931368;CDX1,2,4:0.52051509592;POU5F1:0.508919721373;NANOG{mouse}:0.503974405893;SPZ1:0.496598084774;PPARG:0.486338300817;ETS1,2:0.454405442763;ELF1,2,4:0.428508261957;MAFB:0.415583310434;HLF:0.404763715332;RUNX1..3:0.387640546606;TGIF1:0.274850623845;TAL1_TCF{3,4,12}:0.248632488687;MYOD1:0.232516705865;bHLH_family:0.229888052031;GATA4:0.196924528854;HAND1,2:0.195010190128;STAT2,4,6:0.190919719848;AR:0.152733266569;FOX{F1,F2,J1}:0.150686369973;HBP1_HMGB_SSRP1_UBTF:0.136264178222;RORA:0.109834286087;CEBPA,B_DDIT3:0.10974546718;GLI1..3:0.107635683326;ALX1:0.0957200367322;NFKB1_REL_RELA:0.0550592979356;MYFfamily:0.0402886819857;ZBTB16:0.0344843290556;NKX6-1,2:0.017145631748;NKX3-2:0.0120117875205;VSX1,2:-0.0259504530868;NHLH1,2:-0.0393717946975;IKZF1:-0.0548229140035;KLF4:-0.0574435357456;UFEwm:-0.0659348423748;FOSL2:-0.0882657874183;GZF1:-0.10040837841;NKX2-3_NKX2-5:-0.134085603708;HMGA1,2:-0.139897843786;ALX4:-0.16280030732;BACH2:-0.162972886037;EP300:-0.1847463558;FOX{D1,D2}:-0.199978872545;NFE2:-0.200550321775;ATF5_CREB3:-0.201617070882;REST:-0.210913950968;NR5A1,2:-0.211705494558;SMAD1..7,9:-0.21623176394;STAT1,3:-0.218065408607;PRDM1:-0.220373742085;TBP:-0.266873657346;MTF1:-0.27332335842;CUX2:-0.293652187831;FOS_FOS{B,L1}_JUN{B,D}:-0.307995705648;MYB:-0.371749013835;HIF1A:-0.375651724424;RFX2..5_RFXANK_RFXAP:-0.378176798139;FOXA2:-0.39933768711;ZEB1:-0.400435430414;ZBTB6:-0.442894384598;TEF:-0.446624482221;GFI1B:-0.447832922687;HOX{A5,B5}:-0.454332970801;ATF4:-0.470637912461;PAX6:-0.493703747648;FOXQ1:-0.495143520878;GATA6:-0.49690221335;ONECUT1,2:-0.503477024171;AIRE:-0.510806301336;HOX{A6,A7,B6,B7}:-0.512810409572;PITX1..3:-0.514248799664;CRX:-0.532926464995;LMO2:-0.536985200202;PAX5:-0.552677502954;HNF1A:-0.554232581989;PDX1:-0.561141416605;FOXP1:-0.561319093512;PRRX1,2:-0.563579200539;HOXA9_MEIS1:-0.580832719523;FOXM1:-0.582947673374;FOXO1,3,4:-0.587349657169;NR1H4:-0.610553850082;SRF:-0.61939352836;T:-0.637945929547;XBP1:-0.639935321047;DBP:-0.641744398909;FOXN1:-0.642378607155;POU6F1:-0.648855896978;TOPORS:-0.657984906462;YY1:-0.667972926205;SOX5:-0.673489991333;POU1F1:-0.688502704285;HSF1,2:-0.691571972992;MEF2{A,B,C,D}:-0.696407293825;ZFP161:-0.71264834554;ELK1,4_GABP{A,B1}:-0.723143773054;ATF2:-0.742826552572;HOX{A4,D4}:-0.747350661336;NRF1:-0.757849732878;PAX3,7:-0.789957622173;SOX{8,9,10}:-0.803043744203;NFIX:-0.810179044558;CDC5L:-0.82035723066;NANOG:-0.822889929721;MYBL2:-0.840655357861;ZNF423:-0.8416395028;ZNF238:-0.852796390664;EVI1:-0.853561225866;ATF6:-0.865636930308;TFAP2{A,C}:-0.889516448047;E2F1..5:-0.895532032739;TLX1..3_NFIC{dimer}:-0.904323536471;SNAI1..3:-0.908792151137;BREu{core}:-0.913344714477;ZNF143:-0.919612740747;XCPE1{core}:-0.931202763159;HIC1:-0.939876182222;ZNF148:-0.957463938976;POU3F1..4:-0.988603119333;SOX2:-1.00005630711;MED-1{core}:-1.0012194491;SP1:-1.00317221432;ZIC1..3:-1.01648814245;AHR_ARNT_ARNT2:-1.01935021866;BPTF:-1.03425842113;GTF2I:-1.04366910597;POU2F1..3:-1.05541093152;NFATC1..3:-1.05960383149;SOX17:-1.11687417968;NR3C1:-1.11725646734;RREB1:-1.12137493048;NFY{A,B,C}:-1.13486632612;ADNP_IRX_SIX_ZHX:-1.13796238006;JUN:-1.1418911396;CREB1:-1.17766664766;TFAP2B:-1.18898790322;TP53:-1.18961230783;FOX{I1,J2}:-1.2113176339;TEAD1:-1.2175193475;NKX3-1:-1.2194476555;STAT5{A,B}:-1.25544299401;GCM1,2:-1.27300354379;GTF2A1,2:-1.28047792138;ZNF384:-1.30444714285;EGR1..3:-1.30780971394;GFI1:-1.31449386208;MTE{core}:-1.33345342669;PATZ1:-1.37282573585;MAZ:-1.39087973797;RFX1:-1.42542981097;MZF1:-1.45019960918;TFDP1:-1.50078190508;FOXL1:-1.53763503601;RBPJ:-1.66637808527;LEF1_TCF7_TCF7L1,2:-1.67775717012;NKX2-1,4:-1.87232218858;PBX1:-1.90821645117;TBX4,5:-1.9827254479
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:13323-143B2;search_select_hide=table117:FF:13323-143B2
}}
}}

Latest revision as of 18:56, 4 June 2020

Name:Monocyte-derived macrophages response to udorn influenza infection
Species:Human (Homo sapiens)
Library ID:CNhs13650
Sample type:time courses
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexn/a
ageadult
cell typeHMDM
cell linePrimary
companyNA
collaborationBaillie/Tomoiu/Fisher/Hume
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004904
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13650 CAGE DRX008598 DRR009470
Accession ID Hg19

Library idBAMCTSS
CNhs13650 DRZ000895 DRZ002280
Accession ID Hg38

Library idBAMCTSS
CNhs13650 DRZ012245 DRZ013630
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.119
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.177
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.274
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast1.219
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0655
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.318
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.78
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.218
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.171
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.191
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.601
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.655
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.155
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.308
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.099
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.303
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.407
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.206
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.302
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.302
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.177
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.177
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.655
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate1.111
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13650

Jaspar motifP-value
MA0002.24.70481e-4
MA0003.10.126
MA0004.10.202
MA0006.10.683
MA0007.10.0759
MA0009.10.273
MA0014.10.233
MA0017.10.00198
MA0018.20.005
MA0019.10.575
MA0024.10.00733
MA0025.10.449
MA0027.10.142
MA0028.10.454
MA0029.10.683
MA0030.10.00583
MA0031.10.114
MA0035.20.721
MA0038.10.0382
MA0039.20.927
MA0040.10.804
MA0041.10.441
MA0042.10.822
MA0043.10.0143
MA0046.10.184
MA0047.20.434
MA0048.10.432
MA0050.12.02255e-4
MA0051.10.00941
MA0052.10.23
MA0055.10.646
MA0057.10.596
MA0058.10.0462
MA0059.10.133
MA0060.13.96578e-9
MA0061.10.124
MA0062.20.613
MA0065.20.00234
MA0066.10.00285
MA0067.10.285
MA0068.19.30148e-4
MA0069.10.717
MA0070.10.739
MA0071.10.0709
MA0072.10.856
MA0073.10.367
MA0074.10.151
MA0076.10.253
MA0077.10.467
MA0078.10.796
MA0079.20.927
MA0080.25.47982e-15
MA0081.10.00155
MA0083.10.278
MA0084.10.329
MA0087.10.82
MA0088.10.504
MA0090.10.0146
MA0091.10.197
MA0092.10.29
MA0093.10.184
MA0099.20.446
MA0100.10.592
MA0101.10.698
MA0102.20.0299
MA0103.10.291
MA0104.20.369
MA0105.17.49777e-4
MA0106.10.969
MA0107.10.625
MA0108.21.65305e-5
MA0111.10.215
MA0112.22.75626e-5
MA0113.10.507
MA0114.10.0146
MA0115.10.44
MA0116.17.22934e-5
MA0117.10.734
MA0119.10.517
MA0122.10.991
MA0124.10.454
MA0125.10.971
MA0131.10.213
MA0135.10.609
MA0136.13.07627e-9
MA0137.20.965
MA0138.20.275
MA0139.10.24
MA0140.10.417
MA0141.10.00915
MA0142.10.116
MA0143.10.0935
MA0144.10.262
MA0145.10.118
MA0146.10.0492
MA0147.10.483
MA0148.10.87
MA0149.10.00861
MA0150.10.158
MA0152.10.754
MA0153.10.0169
MA0154.10.00337
MA0155.10.531
MA0156.10.0132
MA0157.10.894
MA0159.10.00422
MA0160.10.0152
MA0162.10.289
MA0163.12.74904e-9
MA0164.10.99
MA0258.17.73808e-4
MA0259.10.822



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13650

Novel motifP-value
10.0794
100.0319
1000.826
1010.246
1020.633
1030.0708
1040.764
1050.671
1060.017
1070.29
1080.635
1090.054
110.0432
1100.221
1110.0098
1120.029
1130.976
1140.00388
1150.825
1160.566
1170.09
1180.297
1190.0819
120.767
1200.163
1210.411
1220.958
1230.102
1240.396
1250.0187
1260.328
1270.132
1280.0281
1290.377
130.08
1300.402
1310.899
1320.548
1330.418
1340.609
1350.0476
1360.973
1370.0759
1380.299
1390.0271
140.44
1400.114
1410.49
1420.639
1430.0986
1440.349
1450.29
1460.778
1470.513
1480.00982
1490.379
150.127
1500.454
1510.524
1520.143
1530.652
1540.951
1550.161
1560.83
1570.859
1580.65
1590.332
160.151
1600.201
1610.429
1620.902
1630.458
1640.0973
1650.354
1660.698
1670.0374
1680.546
1690.00343
170.206
180.134
190.216
20.841
200.949
210.351
220.2
230.23
240.186
250.467
260.0552
270.106
280.932
290.13
30.0422
300.662
310.515
320.216
330.307
340.364
350.256
360.037
370.0901
380.128
390.645
40.718
400.0796
410.139
420.599
430.11
440.00895
450.604
460.0796
470.218
480.192
490.16
50.374
500.926
510.337
520.304
530.479
540.316
550.245
560.675
570.401
580.23
590.095
60.372
600.0528
610.195
620.135
630.283
640.166
650.0872
660.847
670.087
680.944
690.46
70.212
700.0168
710.0477
720.211
730.0499
740.765
750.0438
760.352
770.214
780.0765
790.0169
80.0519
800.868
810.164
820.0462
830.81
840.771
850.0028
860.0824
870.136
880.506
890.0819
90.366
900.0127
910.357
920.0712
930.627
940.0133
950.0953
960.124
970.95
980.124
990.621



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13650


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000235 (macrophage)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000357 (0 hr sample)
0000086 (human macrophage sample)
0000647 (udorn influenza infection sample)
0011215 (human Monocyte-derived macrophages 0h after udorn influenza infection sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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