FFCP PHASE1:Hg19::chr11:110305471..110305475,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:110305471..110305475,+ to FFCP PHASE1:Hg19::chr11:110305471..110305475,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:110305471..110305475,+ | |||
|description=CAGE_peak_at_chr11:110305471..110305475,+ | |||
|id=chr11:110305471..110305475,+ | |||
|ontology_enrichment_celltype=CL:0002087!5.08e-14!119;CL:0002031!5.63e-13!124;CL:0000738!1.79e-12!140;CL:0000037!9.00e-11!172;CL:0000566!9.00e-11!172;CL:0000839!3.18e-10!70;CL:0002032!4.61e-10!165;CL:0000837!4.61e-10!165;CL:0000557!7.33e-10!71;CL:0000766!8.50e-10!76;CL:0002194!1.15e-09!63;CL:0000576!1.15e-09!63;CL:0000040!1.15e-09!63;CL:0000559!1.15e-09!63;CL:0000988!1.25e-09!182;CL:0002057!4.77e-09!42;CL:0002009!6.13e-09!65;CL:0000860!8.90e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.82e-19;6!CL:0002397;4.82e-19;6!CL:0000226;4.50e-10;3!CL:0000842;4.50e-10;3!CL:0000766;4.06e-09;69!CL:0000222;3.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,8.12e-13,9;CL:0002397,8.12e-13,9;CL:0000766,1.82e-11,72;CL:0000738,3.92e-11,136;CL:0000839,1.28e-10,66;CL:0000557,1.97e-10,67;CL:0000473,2.74e-10,48;CL:0000234,2.74e-10,48;CL:0000226,9.36e-10,3;CL:0000842,9.36e-10,3;CL:0000037,1.24e-09,168;CL:0000860,2.07e-09,42;CL:0002057,2.07e-09,42;CL:0000988,5.69e-09,177;CL:0002087,7.26e-09,115;CL:0002031,1.64e-08,120;CL:0000763,2.67e-08,108;CL:0000049,2.67e-08,108;CL:0002194,5.94e-08,59;CL:0000576,5.94e-08,59;CL:0000040,5.94e-08,59;CL:0000559,5.94e-08,59;CL:0002032,8.85e-08,161;CL:0000837,8.85e-08,161;CL:0002009,1.19e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.77e-09;1!UBERON:0003124;1.36e-08;1!UBERON:0005425;3.56e-08;1!CL:0002057;1.30e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.56e-08;1!DOID:10165;3.56e-08;1!DOID:1798;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.10e-08,1;DOID:10165,3.10e-08,1;DOID:1798,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.14e-10!102;UBERON:0003061!7.14e-10!102;UBERON:0001474!1.41e-08!86;UBERON:0002193!2.19e-08!112;UBERON:0002371!3.54e-08!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.95e-10;3!UBERON:0004054;1.95e-10;3!UBERON:0000998;9.77e-09;1!UBERON:0006868;9.77e-09;1!UBERON:0001000;3.56e-08;1!UBERON:0000996;3.56e-08;1!UBERON:0000941;3.56e-08;1!UBERON:0001785;3.56e-08;1!UBERON:0002464;3.56e-08;1!UBERON:0004904;3.56e-08;1!UBERON:0001021;3.56e-08;1!UBERON:0005352;3.56e-08;1!UBERON:0005904;4.89e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.22e-10,3;UBERON:0004054,1.22e-10,3;UBERON:0002390,2.51e-09,98;UBERON:0003061,2.51e-09,98;UBERON:0002371,5.48e-09,76;UBERON:0000998,9.79e-09,1;UBERON:0006868,9.79e-09,1;UBERON:0001000,1.75e-08,1;UBERON:0005352,1.75e-08,1;UBERON:0000941,2.50e-08,1;UBERON:0001785,2.50e-08,1;UBERON:0002464,2.50e-08,1;UBERON:0004904,2.50e-08,1;UBERON:0001021,2.50e-08,1;UBERON:0003902,2.50e-08,1;UBERON:0005425,2.50e-08,1;UBERON:0000996,2.89e-08,1;UBERON:0002193,2.98e-08,108;UBERON:0001474,3.36e-08,82;UBERON:0005904,3.45e-08,4;UBERON:0004765,2.60e-07,90;UBERON:0002405,5.11e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,1.15148819429164,0.77408061658038,0,0.30120591877825,0,0.46480320348181,0.284338464974843,0.293600439334847,1.66198622559563,4.8130667392834,2.38711957787437,0.447830948479849,0.647787332037959,0,0.290796477559129,0.755751887377619,0,0.929716147622738,1.23350366406548,0.929119112685311,0.575384784644301,0,0.236482229888585,1.03423704220986,1.29096936716765,0,0.188242339542605,0,0,0.612167784741805,0,1.27867425159808,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,1.27562579979026,0.419317291016752,0.336985893439485,0.450530678524519,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,1.1384259382189,1.76171156811282,0.382273228125229,0,0.560508562981536,0.263384084775077,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0,0.664601683750863,0,0.640456598628376,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0.604820229674197,0.802320587350522,1.01377082717959,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.900273288253207,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.330881918197182,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,1.72943944100354,2.65109110195398,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0.112085143993527,0.591092280605782,0.646882724578552,0.898401253958239,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.07857100409308,0.426910231213777,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.06082023295445,0.0915694648183434,0.247528499761764,0,0.650060246036521,0,0,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,1.69458841398202,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0.144269212976445,0.569134746787313,0,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0.47003968731907,0,0,0.321176150207399,0,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0.222617410045812,0.16480387422676,0.844501632511974,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0.246169610922139,0,0.179736702294654,0.895105873378046,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0.583209226766509,0,0,0,0,0.221158519862449,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0,0.417687798021821,0.337005664903385,0,0,0,0.586993856796269,0,1.97292201424695,0,0,0.505492637027904,0,0.414752765588989,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0,0.0633107959558787,0.782205530939212,0,0,0,0,0,0.343189995723929,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.547621515567972,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0.858452096273142,0,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0.316801009558219,0,0.191915197319445,0,0,1.27134268827375,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0.5289304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| ||
|short_description=p@chr11:110305471..110305475,+ | |||
}} | }} |
Latest revision as of 18:02, 23 July 2015
Short description: | p@chr11:110305471..110305475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:110305471..110305475, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 8.12e-13 | 9 |
CD14-positive, CD16-positive monocyte | 8.12e-13 | 9 |
myeloid leukocyte | 1.82e-11 | 72 |
leukocyte | 3.92e-11 | 136 |
myeloid lineage restricted progenitor cell | 1.28e-10 | 66 |
granulocyte monocyte progenitor cell | 1.97e-10 | 67 |
defensive cell | 2.74e-10 | 48 |
phagocyte | 2.74e-10 | 48 |
single nucleate cell | 9.36e-10 | 3 |
mononuclear cell | 9.36e-10 | 3 |
hematopoietic stem cell | 1.24e-09 | 168 |
classical monocyte | 2.07e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-09 | 42 |
hematopoietic cell | 5.69e-09 | 177 |
nongranular leukocyte | 7.26e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.64e-08 | 120 |
myeloid cell | 2.67e-08 | 108 |
common myeloid progenitor | 2.67e-08 | 108 |
monopoietic cell | 5.94e-08 | 59 |
monocyte | 5.94e-08 | 59 |
monoblast | 5.94e-08 | 59 |
promonocyte | 5.94e-08 | 59 |
hematopoietic oligopotent progenitor cell | 8.85e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.85e-08 | 161 |
macrophage dendritic cell progenitor | 1.19e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.22e-10 | 3 |
internal male genitalia | 1.22e-10 | 3 |
hematopoietic system | 2.51e-09 | 98 |
blood island | 2.51e-09 | 98 |
bone marrow | 5.48e-09 | 76 |
seminal vesicle | 9.79e-09 | 1 |
seminal fluid secreting gland | 9.79e-09 | 1 |
vas deferens | 1.75e-08 | 1 |
spermatic cord | 1.75e-08 | 1 |
cranial nerve II | 2.50e-08 | 1 |
cranial nerve | 2.50e-08 | 1 |
nerve trunk | 2.50e-08 | 1 |
nerve connecting eye with brain | 2.50e-08 | 1 |
nerve | 2.50e-08 | 1 |
retinal neural layer | 2.50e-08 | 1 |
presumptive neural retina | 2.50e-08 | 1 |
vagina | 2.89e-08 | 1 |
hemolymphoid system | 2.98e-08 | 108 |
bone element | 3.36e-08 | 82 |
duct of male reproductive system | 3.45e-08 | 4 |
skeletal element | 2.60e-07 | 90 |
immune system | 5.11e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.10e-08 | 1 |
endocrine pancreas cancer | 3.10e-08 | 1 |
pancreatic endocrine carcinoma | 3.10e-08 | 1 |