FFCP PHASE1:Hg19::chr11:61584319..61584354,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61584319..61584354,- to FFCP PHASE1:Hg19::chr11:61584319..61584354,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3992 | |EntrezGene=3992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |HGNC=3574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000491310_5end | |||
|cluster_id=chr11:61584319..61584354,- | |||
|description=CAGE_peak_1_at_FADS1_5end | |||
|id=chr11:61584319..61584354,- | |||
|ontology_enrichment_celltype=CL:0000055!9.90e-12!180;CL:0000136!1.37e-07!15;CL:0000548!2.32e-07!679;CL:0000004!2.32e-07!679;CL:0000255!2.32e-07!679;CL:0000012!4.47e-07!682;CL:0000057!4.55e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.05e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.37e-07,15;CL:0000057,3.66e-07,76;CL:0002321,8.69e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.71e-19!365;UBERON:0000119!1.09e-17!312;UBERON:0000483!1.24e-16!309;UBERON:0000481!6.44e-16!347;UBERON:0005256!2.66e-12!143;UBERON:0000924!4.21e-12!173;UBERON:0006601!4.21e-12!173;UBERON:0000064!4.30e-12!219;UBERON:0000033!1.01e-11!123;UBERON:0000477!1.75e-11!286;UBERON:0004121!3.70e-11!169;UBERON:0000923!5.37e-11!604;UBERON:0005291!5.37e-11!604;UBERON:0006598!5.37e-11!604;UBERON:0002532!5.37e-11!604;UBERON:0002050!5.94e-11!605;UBERON:0005423!5.94e-11!605;UBERON:0002346!8.06e-11!90;UBERON:0000073!1.54e-10!94;UBERON:0001016!1.54e-10!94;UBERON:0002100!2.97e-10!216;UBERON:0000922!3.45e-10!612;UBERON:0000468!8.21e-10!659;UBERON:0003075!8.72e-10!86;UBERON:0007284!8.72e-10!86;UBERON:0005743!1.09e-09!86;UBERON:0000955!1.29e-09!69;UBERON:0006238!1.29e-09!69;UBERON:0000153!2.16e-09!129;UBERON:0007811!2.16e-09!129;UBERON:0001017!9.43e-09!82;UBERON:0003056!3.63e-08!61;UBERON:0002616!4.01e-08!59;UBERON:0000025!1.11e-07!194;UBERON:0004111!1.83e-07!241;UBERON:0000062!2.77e-07!511;UBERON:0002200!3.84e-07!11;UBERON:0006876!3.84e-07!11;UBERON:0000479!3.87e-07!787;UBERON:0000467!6.02e-07!625;UBERON:0000914!9.36e-07!83;UBERON:0002329!9.36e-07!83;UBERON:0003077!9.36e-07!83;UBERON:0003059!9.36e-07!83;UBERON:0007282!9.36e-07!83;UBERON:0009618!9.36e-07!83;UBERON:0007285!9.36e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;3.81e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.05e-17,309;UBERON:0000483,1.20e-16,306;UBERON:0004121,4.22e-12,171;UBERON:0000924,4.22e-12,171;UBERON:0006601,4.22e-12,171;UBERON:0010314,6.66e-12,132;UBERON:0003104,8.68e-11,160;UBERON:0009142,8.68e-11,160;UBERON:0002346,1.43e-10,86;UBERON:0011216,1.89e-10,223;UBERON:0005423,4.68e-10,581;UBERON:0000955,7.39e-10,68;UBERON:0006238,7.39e-10,68;UBERON:0001016,8.63e-10,89;UBERON:0003075,1.55e-09,82;UBERON:0007284,1.55e-09,82;UBERON:0000923,4.96e-09,560;UBERON:0010316,4.96e-09,560;UBERON:0005291,4.96e-09,560;UBERON:0006598,4.96e-09,560;UBERON:0010317,4.96e-09,560;UBERON:0002532,4.96e-09,560;UBERON:0002050,5.77e-09,564;UBERON:0001017,5.96e-09,81;UBERON:0010371,9.86e-09,104;UBERON:0000922,1.18e-08,592;UBERON:0005256,1.63e-08,122;UBERON:0003056,2.49e-08,61;UBERON:0002100,8.21e-08,199;UBERON:0000025,1.67e-07,192;UBERON:0004111,2.96e-07,240;UBERON:0006876,3.84e-07,11 | |||
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| ||
|short_description=p1@FADS1 | |||
}} | }} |
Latest revision as of 17:07, 18 September 2015
Short description: | p1@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000491310_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.37e-07 | 15 |
fibroblast | 3.66e-07 | 76 |
embryonic cell | 8.69e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.05e-17 | 309 |
epithelium | 1.20e-16 | 306 |
ectoderm-derived structure | 4.22e-12 | 171 |
ectoderm | 4.22e-12 | 171 |
presumptive ectoderm | 4.22e-12 | 171 |
structure with developmental contribution from neural crest | 6.66e-12 | 132 |
mesenchyme | 8.68e-11 | 160 |
entire embryonic mesenchyme | 8.68e-11 | 160 |
neurectoderm | 1.43e-10 | 86 |
organ system subdivision | 1.89e-10 | 223 |
developing anatomical structure | 4.68e-10 | 581 |
brain | 7.39e-10 | 68 |
future brain | 7.39e-10 | 68 |
nervous system | 8.63e-10 | 89 |
neural plate | 1.55e-09 | 82 |
presumptive neural plate | 1.55e-09 | 82 |
germ layer | 4.96e-09 | 560 |
germ layer / neural crest | 4.96e-09 | 560 |
embryonic tissue | 4.96e-09 | 560 |
presumptive structure | 4.96e-09 | 560 |
germ layer / neural crest derived structure | 4.96e-09 | 560 |
epiblast (generic) | 4.96e-09 | 560 |
embryonic structure | 5.77e-09 | 564 |
central nervous system | 5.96e-09 | 81 |
ecto-epithelium | 9.86e-09 | 104 |
embryo | 1.18e-08 | 592 |
trunk mesenchyme | 1.63e-08 | 122 |
pre-chordal neural plate | 2.49e-08 | 61 |
trunk | 8.21e-08 | 199 |
tube | 1.67e-07 | 192 |
anatomical conduit | 2.96e-07 | 240 |
vasculature of organ | 3.84e-07 | 11 |