FFCP PHASE1:Hg19::chr11:89224508..89224563,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:89224508..89224563,- to FFCP PHASE1:Hg19::chr11:89224508..89224563,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50507 | |EntrezGene=50507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7891 | |HGNC=7891 | ||
|TSSclassifier=strong | |||
|UniProt=E9PI95 | |UniProt=E9PI95 | ||
|association_with_transcript=0bp_to_ENST00000525196,ENST00000525278,ENST00000529343_5end | |||
|cluster_id=chr11:89224508..89224563,- | |||
|coexpression_cluster_id=C1648 | |||
|description=CAGE_peak_1_at_NOX4_5end | |||
|id=chr11:89224508..89224563,- | |||
|ontology_enrichment_celltype=CL:0000222!2.09e-20!119;CL:0000055!6.77e-20!180;CL:0002139!1.88e-18!24;CL:0000393!3.78e-16!60;CL:0000211!3.78e-16!60;CL:0000183!5.68e-15!59;CL:0000680!5.77e-15!57;CL:0000056!5.77e-15!57;CL:0000355!5.77e-15!57;CL:0000187!9.10e-15!54;CL:0000071!1.64e-14!18;CL:0002546!1.64e-14!18;CL:0000115!2.96e-14!35;CL:0000359!1.37e-13!32;CL:0000192!2.54e-12!42;CL:0000514!2.54e-12!42;CL:0002078!1.10e-10!44;CL:0000220!2.11e-10!246;CL:0002321!2.52e-10!248;CL:1000413!5.98e-08!9;CL:0000213!5.71e-07!57;CL:0000215!5.71e-07!57;CL:0002539!8.04e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.53e-25;24!CL:0000071;1.19e-19;18!CL:0000115;1.68e-18;36!CL:0000359;5.66e-16;32!CL:0002078;4.98e-11;45!CL:1000413;1.67e-10;9!CL:0000192;3.12e-09;43!CL:0002543;7.94e-08;6!CL:0002544;1.20e-07;6!CL:0002539;1.28e-07;10!CL:0002138;4.43e-07;6!CL:0000187;4.64e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.79e-25,24;CL:0000115,7.68e-22,36;CL:0000222,4.61e-20,121;CL:0000071,1.23e-19,18;CL:0002546,1.23e-19,18;CL:0000359,5.53e-17,32;CL:0002078,2.32e-16,45;CL:0000192,5.80e-13,43;CL:0000514,5.80e-13,43;CL:0000187,1.04e-12,55;CL:0000393,1.06e-12,61;CL:0000211,1.06e-12,61;CL:0000680,1.83e-11,58;CL:0000056,1.83e-11,58;CL:0000355,1.83e-11,58;CL:1000413,1.76e-10,9;CL:0000213,2.44e-09,58;CL:0000215,2.44e-09,58;CL:0002321,2.15e-08,250;CL:0002543,7.84e-08,6;CL:0002539,1.13e-07,10;CL:0002544,1.26e-07,6;CL:0005020,4.58e-07,6;CL:0002138,4.58e-07,6;CL:0005022,4.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.19e-19;18!CL:0000514;3.12e-09;43!CL:0005022;4.43e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.44e-36!79;UBERON:0007798!1.44e-36!79;UBERON:0000055!5.84e-33!69;UBERON:0004872!7.66e-31!84;UBERON:0001981!1.04e-30!60;UBERON:0007500!1.04e-30!60;UBERON:0004537!1.04e-30!60;UBERON:0006965!1.04e-30!60;UBERON:0001009!1.41e-30!113;UBERON:0004535!1.67e-29!110;UBERON:0003914!2.24e-21!118;UBERON:0001637!3.31e-20!42;UBERON:0003509!3.31e-20!42;UBERON:0004572!3.31e-20!42;UBERON:0000119!4.37e-18!312;UBERON:0004111!1.22e-17!241;UBERON:0000477!1.73e-17!286;UBERON:0000483!2.58e-17!309;UBERON:0000025!4.57e-17!194;UBERON:0002385!9.18e-17!63;UBERON:0001015!9.18e-17!63;UBERON:0000383!9.18e-17!63;UBERON:0001134!2.05e-16!61;UBERON:0002036!2.05e-16!61;UBERON:0003082!2.05e-16!61;UBERON:0004573!2.58e-16!33;UBERON:0004571!2.58e-16!33;UBERON:0004290!1.84e-15!70;UBERON:0000914!9.19e-15!83;UBERON:0002329!9.19e-15!83;UBERON:0003077!9.19e-15!83;UBERON:0003059!9.19e-15!83;UBERON:0007282!9.19e-15!83;UBERON:0009618!9.19e-15!83;UBERON:0007285!9.19e-15!83;UBERON:0000490!1.17e-14!138;UBERON:0001986!1.64e-14!18;UBERON:0004638!1.64e-14!18;UBERON:0004852!1.64e-14!18;UBERON:0000468!3.19e-13!659;UBERON:0000486!1.57e-12!82;UBERON:0000947!7.38e-12!21;UBERON:0010191!7.38e-12!21;UBERON:0000475!4.21e-11!365;UBERON:0000487!4.42e-10!22;UBERON:0000481!1.51e-09!347;UBERON:0000467!1.52e-09!625;UBERON:0000480!2.15e-09!626;UBERON:0005256!2.41e-09!143;UBERON:0007100!8.40e-09!27;UBERON:0006914!1.45e-08!25;UBERON:0003103!3.23e-08!69;UBERON:0007625!4.78e-08!11;UBERON:0003915!5.98e-08!9;UBERON:0004700!5.98e-08!9;UBERON:0001917!5.98e-08!9;UBERON:0000948!6.99e-08!24;UBERON:0005498!6.99e-08!24;UBERON:0004140!6.99e-08!24;UBERON:0009881!6.99e-08!24;UBERON:0004141!6.99e-08!24;UBERON:0003084!6.99e-08!24;UBERON:0007005!6.99e-08!24;UBERON:0004139!6.99e-08!24;UBERON:0004291!6.99e-08!24;UBERON:0002100!9.01e-08!216;UBERON:0000922!2.17e-07!612;UBERON:0001135!4.85e-07!15;UBERON:0004237!8.04e-07!10;UBERON:0004695!8.04e-07!10;UBERON:0002111!8.04e-07!10;UBERON:0004178!8.04e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.19e-19;18!UBERON:0001986;1.19e-19;18!UBERON:0004852;1.19e-19;18!UBERON:0000055;3.75e-19;65!UBERON:0007500;8.95e-19;56!UBERON:0001981;8.95e-19;56!UBERON:0004537;8.95e-19;56!UBERON:0002049;4.23e-18;75!UBERON:0007798;4.23e-18;75!UBERON:0001637;4.32e-18;42!UBERON:0003509;4.32e-18;42!UBERON:0004572;4.32e-18;42!UBERON:0004573;3.48e-17;33!UBERON:0004571;3.48e-17;33!UBERON:0000487;1.04e-14;22!UBERON:0003914;1.30e-14;74!UBERON:0006914;4.34e-12;25!UBERON:0000947;5.55e-12;21!UBERON:0010191;5.55e-12;21!UBERON:0000490;8.22e-12;33!UBERON:0004535;5.48e-11;109!UBERON:0001009;8.21e-11;112!UBERON:0003915;1.67e-10;9!UBERON:0004700;1.67e-10;9!UBERON:0001917;1.67e-10;9!UBERON:0007625;2.06e-09;11!UBERON:0007100;5.06e-09;25!UBERON:0001638;9.06e-09;9!UBERON:0003920;9.06e-09;9!UBERON:0004582;9.06e-09;9!UBERON:0000948;1.21e-08;22!UBERON:0010260;2.04e-08;9!UBERON:0004237;1.28e-07;10!UBERON:0004695;1.28e-07;10!UBERON:0002111;1.28e-07;10!UBERON:0004178;1.28e-07;10!UBERON:0000025;2.38e-07;93!UBERON:0003688;2.81e-07;6!UBERON:0002358;2.81e-07;6!UBERON:0003684;2.81e-07;6!UBERON:0001178;2.81e-07;6 | |||
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| ||
|short_description=p1@NOX4 | |||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p1@NOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOX4_5end |
Coexpression cluster: | C1648_Adipocyte_Ciliary_Endothelial_Smooth_aorta_kidney_hepatic |
Association with transcript: | 0bp_to_ENST00000525196, ENST00000525278, ENST00000529343_5end |
EntrezGene: | NOX4 |
HGNC: | 7891 |
UniProt: | E9PI95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.79e-25 | 24 |
endothelial cell | 7.68e-22 | 36 |
mesodermal cell | 4.61e-20 | 121 |
blood vessel endothelial cell | 1.23e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.23e-19 | 18 |
vascular associated smooth muscle cell | 5.53e-17 | 32 |
meso-epithelial cell | 2.32e-16 | 45 |
smooth muscle cell | 5.80e-13 | 43 |
smooth muscle myoblast | 5.80e-13 | 43 |
muscle cell | 1.04e-12 | 55 |
electrically responsive cell | 1.06e-12 | 61 |
electrically active cell | 1.06e-12 | 61 |
muscle precursor cell | 1.83e-11 | 58 |
myoblast | 1.83e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.83e-11 | 58 |
endothelial cell of artery | 1.76e-10 | 9 |
lining cell | 2.44e-09 | 58 |
barrier cell | 2.44e-09 | 58 |
embryonic cell | 2.15e-08 | 250 |
vein endothelial cell | 7.84e-08 | 6 |
aortic smooth muscle cell | 1.13e-07 | 10 |
aortic endothelial cell | 1.26e-07 | 6 |
lymphangioblast | 4.58e-07 | 6 |
endothelial cell of lymphatic vessel | 4.58e-07 | 6 |
vascular lymphangioblast | 4.58e-07 | 6 |