FFCP PHASE1:Hg19::chr13:44453807..44453817,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr13:44453807..44453817,+ to FFCP PHASE1:Hg19::chr13:44453807..44453817,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144811 | |EntrezGene=144811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26789 | |HGNC=26789 | ||
|TSSclassifier=strong | |||
|UniProt=A2A3Z5 | |UniProt=A2A3Z5 | ||
|association_with_transcript=113bp_to_ENST00000425906_5end | |||
|cluster_id=chr13:44453807..44453817,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_9_at_LACC1_5end | |||
|id=chr13:44453807..44453817,+ | |||
|ontology_enrichment_celltype=CL:0002009!4.66e-42!65;CL:0002194!1.05e-41!63;CL:0000576!1.05e-41!63;CL:0000040!1.05e-41!63;CL:0000559!1.05e-41!63;CL:0002057!3.09e-39!42;CL:0000557!2.67e-37!71;CL:0000839!3.86e-36!70;CL:0000860!7.49e-36!45;CL:0000766!5.30e-34!76;CL:0000763!7.51e-21!112;CL:0000049!7.51e-21!112;CL:0002087!9.24e-16!119;CL:0002031!1.56e-15!124;CL:0000738!3.71e-13!140;CL:0002032!5.97e-10!165;CL:0000837!5.97e-10!165;CL:0000037!4.63e-09!172;CL:0000566!4.63e-09!172;CL:0000988!6.28e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-118;33!CL:0002057;1.54e-118;33!CL:0000473;6.39e-106;39!CL:0000234;6.39e-106;39!CL:0000576;9.17e-72;48!CL:0000766;1.56e-43;69!CL:0000763;1.30e-22;100!CL:0002087;5.42e-17;104!CL:0002619;3.85e-16;3!CL:0000235;1.60e-14;6!CL:0000738;1.74e-12;136!CL:0000988;9.15e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.68e-115,48;CL:0000234,4.68e-115,48;CL:0002194,9.67e-109,59;CL:0000576,9.67e-109,59;CL:0000040,9.67e-109,59;CL:0000559,9.67e-109,59;CL:0002009,4.99e-105,61;CL:0000860,3.01e-101,42;CL:0002057,3.01e-101,42;CL:0000839,1.02e-96,66;CL:0000557,3.36e-95,67;CL:0000766,3.05e-88,72;CL:0000763,5.73e-57,108;CL:0000049,5.73e-57,108;CL:0002087,3.87e-53,115;CL:0002031,1.13e-50,120;CL:0000738,5.44e-44,136;CL:0002032,3.48e-36,161;CL:0000837,3.48e-36,161;CL:0000037,2.06e-34,168;CL:0000988,2.45e-32,177;CL:0002619,3.76e-16,3;CL:0000134,5.81e-15,354;CL:0002320,1.54e-14,361;CL:0000235,1.77e-14,6;CL:0000219,4.79e-13,386;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-76;42!CL:0000049;2.22e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.90e-33!80;UBERON:0001474!6.78e-33!86;UBERON:0004765!1.85e-28!101;UBERON:0001434!1.85e-28!101;UBERON:0002405!6.33e-27!115;UBERON:0002390!2.10e-25!102;UBERON:0003061!2.10e-25!102;UBERON:0002193!6.84e-23!112;UBERON:0002204!5.43e-20!167;UBERON:0003081!8.45e-12!216;UBERON:0000062!8.19e-09!511;UBERON:0000926!2.01e-08!448;UBERON:0004120!2.01e-08!448;UBERON:0006603!2.01e-08!448;UBERON:0000923!6.24e-07!604;UBERON:0005291!6.24e-07!604;UBERON:0006598!6.24e-07!604;UBERON:0002532!6.24e-07!604;UBERON:0002050!7.07e-07!605;UBERON:0005423!7.07e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-83,76;UBERON:0001474,7.72e-77,82;UBERON:0004765,1.62e-69,90;UBERON:0002405,4.30e-67,93;UBERON:0002390,2.23e-63,98;UBERON:0003061,2.23e-63,98;UBERON:0001434,5.39e-62,100;UBERON:0002193,5.73e-57,108;UBERON:0002204,1.18e-34,167;UBERON:0003081,2.30e-27,203;UBERON:0000926,2.92e-15,315;UBERON:0004120,2.92e-15,315;UBERON:0006603,2.92e-15,315;UBERON:0002384,5.82e-14,371;UBERON:0000923,9.37e-07,560;UBERON:0010316,9.37e-07,560;UBERON:0005291,9.37e-07,560;UBERON:0006598,9.37e-07,560;UBERON:0010317,9.37e-07,560;UBERON:0002532,9.37e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0,3.13481663935894,1.29557466407592,1.80302897343931,2.4717700592526,1.13362783106643,1.94067248950253,4.18372266430232,3.70051099219643,4.02618282163635,8.05538698502021,3.33008918487831,5.67557351732605,1.03423704220986,1.93645405075148,1.35426486594342,5.83551252582075,5.45812300115692,8.09004544002305,3.67300670845083,3.85114832491312,0.639337125799041,4.94776950280074,3.19141852194611,5.96714650745772,3.48251086354301,1.13477044938228,3.11411124497787,2.51248665256743,1.5644487552606,2.17188844705117,1.81619850790011,2.20966581592539,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,1.23108503043699,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,3.64871341923571,3.01354254859276,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.248298857183432,0,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0,0.244209805832924,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0,3.13481663935894,1.29557466407592,1.80302897343931,2.4717700592526,1.13362783106643,1.94067248950253,4.18372266430232,3.70051099219643,4.02618282163635,8.05538698502021,3.33008918487831,5.67557351732605,1.03423704220986,1.93645405075148,1.35426486594342,5.83551252582075,5.45812300115692,8.09004544002305,3.67300670845083,3.85114832491312,0.639337125799041,4.94776950280074,3.19141852194611,5.96714650745772,3.48251086354301,1.13477044938228,3.11411124497787,2.51248665256743,1.5644487552606,2.17188844705117,1.81619850790011,2.20966581592539,4.1140110367315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,1.23108503043699,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,3.64871341923571,3.01354254859276,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.248298857183432,0,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0,0.244209805832924,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p9@LACC1 | |||
}} | }} |
Latest revision as of 10:41, 17 September 2015
Short description: | p9@LACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LACC1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 113bp_to_ENST00000425906_5end |
EntrezGene: | LACC1 |
HGNC: | 26789 |
UniProt: | A2A3Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.68e-115 | 48 |
phagocyte | 4.68e-115 | 48 |
monopoietic cell | 9.67e-109 | 59 |
monocyte | 9.67e-109 | 59 |
monoblast | 9.67e-109 | 59 |
promonocyte | 9.67e-109 | 59 |
macrophage dendritic cell progenitor | 4.99e-105 | 61 |
classical monocyte | 3.01e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.01e-101 | 42 |
myeloid lineage restricted progenitor cell | 1.02e-96 | 66 |
granulocyte monocyte progenitor cell | 3.36e-95 | 67 |
myeloid leukocyte | 3.05e-88 | 72 |
myeloid cell | 5.73e-57 | 108 |
common myeloid progenitor | 5.73e-57 | 108 |
nongranular leukocyte | 3.87e-53 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-50 | 120 |
leukocyte | 5.44e-44 | 136 |
hematopoietic oligopotent progenitor cell | 3.48e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.48e-36 | 161 |
hematopoietic stem cell | 2.06e-34 | 168 |
hematopoietic cell | 2.45e-32 | 177 |
adult endothelial progenitor cell | 3.76e-16 | 3 |
mesenchymal cell | 5.81e-15 | 354 |
connective tissue cell | 1.54e-14 | 361 |
macrophage | 1.77e-14 | 6 |
motile cell | 4.79e-13 | 386 |
multi fate stem cell | 3.23e-11 | 427 |
somatic stem cell | 5.78e-11 | 433 |
stem cell | 1.22e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-83 | 76 |
bone element | 7.72e-77 | 82 |
skeletal element | 1.62e-69 | 90 |
immune system | 4.30e-67 | 93 |
hematopoietic system | 2.23e-63 | 98 |
blood island | 2.23e-63 | 98 |
skeletal system | 5.39e-62 | 100 |
hemolymphoid system | 5.73e-57 | 108 |
musculoskeletal system | 1.18e-34 | 167 |
lateral plate mesoderm | 2.30e-27 | 203 |
mesoderm | 2.92e-15 | 315 |
mesoderm-derived structure | 2.92e-15 | 315 |
presumptive mesoderm | 2.92e-15 | 315 |
connective tissue | 5.82e-14 | 371 |
germ layer | 9.37e-07 | 560 |
germ layer / neural crest | 9.37e-07 | 560 |
embryonic tissue | 9.37e-07 | 560 |
presumptive structure | 9.37e-07 | 560 |
germ layer / neural crest derived structure | 9.37e-07 | 560 |
epiblast (generic) | 9.37e-07 | 560 |