FFCP PHASE1:Hg19::chr14:59104664..59104735,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:59104664..59104735,+ to FFCP PHASE1:Hg19::chr14:59104664..59104735,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51339 | |EntrezGene=51339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17748 | |HGNC=17748 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYJ2,Q9NYF0 | |UniProt=A8MYJ2,Q9NYF0 | ||
|association_with_transcript=-21bp_to_NM_001079520,NM_016651,uc001xdw.2,uc001xdx.2_5end | |||
|cluster_id=chr14:59104664..59104735,+ | |||
|description=CAGE_peak_1_at_DACT1_5end | |||
|id=chr14:59104664..59104735,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.60e-21!180;CL:0000393!2.97e-12!60;CL:0000211!2.97e-12!60;CL:0000680!4.27e-11!57;CL:0000056!4.27e-11!57;CL:0000355!4.27e-11!57;CL:0000192!6.45e-11!42;CL:0000514!6.45e-11!42;CL:0000359!1.98e-10!32;CL:0000187!3.03e-10!54;CL:0000183!3.91e-10!59;CL:0000057!8.77e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.43e-10;32!CL:0000192;1.31e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.02e-12,61;CL:0000211,1.02e-12,61;CL:0000192,4.47e-12,43;CL:0000514,4.47e-12,43;CL:0000680,1.86e-11,58;CL:0000056,1.86e-11,58;CL:0000355,1.86e-11,58;CL:0000359,3.37e-11,32;CL:0000187,1.58e-10,55;CL:0000057,1.61e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.31e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.04e-11!63;UBERON:0001015!1.04e-11!63;UBERON:0000383!1.04e-11!63;UBERON:0001134!2.63e-11!61;UBERON:0002036!2.63e-11!61;UBERON:0003082!2.63e-11!61;UBERON:0005743!1.22e-10!86;UBERON:0000073!1.60e-10!94;UBERON:0001016!1.60e-10!94;UBERON:0001017!3.80e-10!82;UBERON:0007023!4.50e-09!115;UBERON:0004290!4.96e-09!70;UBERON:0000914!5.44e-09!83;UBERON:0002329!5.44e-09!83;UBERON:0003077!5.44e-09!83;UBERON:0003059!5.44e-09!83;UBERON:0007282!5.44e-09!83;UBERON:0009618!5.44e-09!83;UBERON:0007285!5.44e-09!83;UBERON:0001049!2.38e-08!57;UBERON:0005068!2.38e-08!57;UBERON:0006241!2.38e-08!57;UBERON:0007135!2.38e-08!57;UBERON:0002616!2.99e-08!59;UBERON:0000475!4.19e-08!365;UBERON:0003075!5.86e-08!86;UBERON:0007284!5.86e-08!86;UBERON:0004872!1.02e-07!84;UBERON:0000955!3.86e-07!69;UBERON:0006238!3.86e-07!69;UBERON:0000025!8.57e-07!194;UBERON:0002346!9.42e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.12e-07;49!UBERON:0004573;4.04e-07;33!UBERON:0004571;4.04e-07;33!UBERON:0001135;8.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,2.59e-12,64;UBERON:0001015,2.59e-12,64;UBERON:0000383,2.59e-12,64;UBERON:0001134,7.21e-12,62;UBERON:0002036,7.21e-12,62;UBERON:0003082,7.21e-12,62;UBERON:0001017,2.82e-10,81;UBERON:0004872,1.09e-09,83;UBERON:0007524,1.81e-09,73;UBERON:0001016,2.28e-09,89;UBERON:0003077,4.11e-09,72;UBERON:0007285,4.11e-09,72;UBERON:0002329,5.72e-09,71;UBERON:0003059,5.72e-09,71;UBERON:0007282,5.72e-09,71;UBERON:0004290,5.72e-09,71;UBERON:0009618,5.72e-09,71;UBERON:0003075,1.01e-08,82;UBERON:0007284,1.01e-08,82;UBERON:0010314,1.19e-08,132;UBERON:0000025,1.32e-08,192;UBERON:0001637,1.61e-08,42;UBERON:0003509,1.61e-08,42;UBERON:0004572,1.61e-08,42;UBERON:0001049,2.43e-08,56;UBERON:0005068,2.43e-08,56;UBERON:0006241,2.43e-08,56;UBERON:0007135,2.43e-08,56;UBERON:0007023,4.13e-08,114;UBERON:0004573,5.73e-08,33;UBERON:0004571,5.73e-08,33;UBERON:0000073,7.02e-08,53;UBERON:0002616,7.02e-08,53;UBERON:0002346,1.94e-07,86;UBERON:0000955,4.95e-07,68;UBERON:0006238,4.95e-07,68;UBERON:0007503,5.45e-07,78;UBERON:0001135,6.78e-07,15 | |||
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|phase1_expression=12.5358081696684,10.4909256706582,13.6725771973092,14.0102617694383,15.6436383049551,12.2127393374052,12.6649939084155,0.631719873426831,0,3.93174298402414,0,2.18441372130172,3.9565046734268,1.60896258848061,1.98838425436749,8.74022690387308,10.2458069764076,10.9546513558106,14.1500511649247,4.67860020691794,2.04000691244253,4.38836610069323,2.28988789704845,2.46373965131192,5.64941878176613,2.52164238968239,2.21671591514854,2.20390187678302,0,0,0.464448369948228,0,0,0,0,0,0.880801318004542,0.553995408531877,0,0.434021741431704,1.34349284543955,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0.59675003159727,0,0,0,0,0.853460445133014,1.60158394814405,1.72425731986345,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,0,2.64342657158052,1.68152568894461,1.31692042387539,0.393419540227666,0.393010762749165,0.205601498999509,0.83593247695339,0.32592226663359,0,0,0.334231370655521,0,0,0.270803863765016,0.512365278902701,0.520237390239513,0.657751618414705,1.93445012450094,0.869409257205157,5.6348894001583,3.21048993707656,1.04535523804977,0.339928028092699,0.383220493601921,0,0,1.27426165729639,0.651083453856419,0,0.752875595388864,0.895906278080929,3.74792179657038,1.18388626022008,0.821127996921047,0,0,0,0,2.01210257911091,7.28816602508123,0,4.51204119572301,4.05570253090306,24.6538643585841,24.8183783854344,0.945348171640679,4.65631734671384,1.75669571386252,2.88153966094968,0,0,2.59637914923747,4.35324343248168,2.39324328933957,2.14641561874808,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,41.7456439424068,13.4228342364455,14.0353731662012,8.03142538096678,9.22137793715728,16.8203280042692,26.6872489324262,28.3667680679734,4.66816553099649,2.15537075311501,1.9615428373615,3.02714855289863,15.55674996096,0.234321431833797,0.312160076830321,0,0.597794722207204,0.704606991862589,0.323745888736263,0.140450806702248,0,0.368502951935304,0.619954687054593,4.75201142912821,7.91254173691382,1.82032272387605,2.15585442544872,0.673344455816265,0.375355559615893,0,5.70670907145089,14.7114141983529,7.21142682751665,4.08355859376076,3.22901344239952,3.41691822109708,2.96704661623387,2.70081986475962,1.95799805553034,5.41045134095821,5.76962254627928,8.77636927654584,24.1643772799773,5.55354303337052,4.32634523618807,2.42469085228218,1.42003837006646,2.82105875037393,4.40857540007268,0,0,0,4.26907971453584,2.65059536642971,5.80969714347592,8.29288440122964,9.58819233327388,2.91981887260664,0,6.43240938192885,1.38134921352481,0.464367928031979,0,0.118306800039844,0,0.482022059766964,0.110293972732394,0.217879444092406,0,0,0,0,2.21446636387394,0,3.2925920906512,2.94017422771084,0,0,4.13552934676983,0,0,1.02940686179115,0.219500570817251,0,0,0,1.95484983186195,1.03993478527958,2.88662684050547,1.73895607462615,12.5627302832329,0.144366447761074,0,0.190254152234598,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0.93733833986777,0.335964256397719,0.425325291727159,0,0,0,0.492663237895943,0.088048434013226,2.90259361757081,4.32359860250884,3.02981840223312,0.190493682876507,1.52795370223311,1.17217447210047,1.71072446022705,4.62723717164956,0.300343057843917,0.857479297891735,0,2.1798003441664,0.07333828582095,12.1515412812311,3.57656445851882,0,5.05282421511254,1.04007436911366,1.54324424557285,0,0.266422179016099,1.71573592389777,0.542621605391443,0.823240336780769,1.62868092146868,1.42156779497018,0,2.71295439353627,7.84380112740265,5.09862255028491,0,1.00451418286425,0,23.2436109826835,44.7961549753044,2.85273810081437,5.35690834670043,5.13690806375959,9.13210912523467,0,0.394061520403854,0.215627574859517,0.385029108839245,2.03275699377971,15.6167824629146,21.6520867577755,35.0108994548789,29.9831213276987,0,0,0,2.82190430954022,2.00068208423871,1.89885516589815,17.4695523685878,17.3076119133247,23.3399574250223,9.60559602940248,5.71797589482666,4.5481500811197,16.5556914068008,13.2845119707087,22.3086693935461,0.955719759148911,1.95801157462741,8.92172901908225,0.82707210449155,1.94142780736755,0.213455115606889,6.06255142892519,9.98612637062982,20.5625399464183,84.1085468505653,63.5332569412579,115.631958906426,43.4391715976826,45.0302379178699,99.568577187893,28.1994326245483,3.85524234506639,9.41077144159573,1.64254312027618,0.519254429183621,1.74315567689939,0,1.20303882181971,0.644566922551274,5.51109351190112,1.45672934405374,4.98272776845812,1.35359883872224,1.61732207919271,0.784349769176855,1.46139224653261,2.63879072232189,0,0.340187410553031,0.215915916102139,0,0.812839312631559,2.50844886927427,0,0,0.671624264166535,0,0,0.769350375349168,3.60816110269676,3.57916234130733,4.12164046590889,1.00726411300178,0.577566499444116,2.29706215198469,0.650060246036521,1.606839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| ||
|short_description=p1@DACT1 | |||
}} | }} |
Latest revision as of 19:05, 24 September 2015
Short description: | p1@DACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DACT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_NM_001079520, NM_016651, uc001xdw.2, uc001xdx.2_5end |
EntrezGene: | DACT1 |
HGNC: | 17748 |
UniProt: | A8MYJ2Q9NYF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.02e-12 | 61 |
electrically active cell | 1.02e-12 | 61 |
smooth muscle cell | 4.47e-12 | 43 |
smooth muscle myoblast | 4.47e-12 | 43 |
muscle precursor cell | 1.86e-11 | 58 |
myoblast | 1.86e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-11 | 58 |
vascular associated smooth muscle cell | 3.37e-11 | 32 |
muscle cell | 1.58e-10 | 55 |
fibroblast | 1.61e-07 | 76 |