FFCP PHASE1:Hg19::chr16:15737263..15737283,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:15737263..15737283,+ to FFCP PHASE1:Hg19::chr16:15737263..15737283,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54820 | |EntrezGene=54820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17619 | |HGNC=17619 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXR1 | |UniProt=Q9NXR1 | ||
|association_with_transcript=139bp_to_ENST00000396353,ENST00000396355,NM_001143979,uc010uzy.1_5end | |||
|cluster_id=chr16:15737263..15737283,+ | |||
|coexpression_cluster_id=C213 | |||
|description=CAGE_peak_2_at_NDE1_5end | |||
|id=chr16:15737263..15737283,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.32e-61!140;CL:0000037!1.32e-51!172;CL:0000566!1.32e-51!172;CL:0000988!1.99e-50!182;CL:0002031!9.62e-46!124;CL:0002032!8.19e-45!165;CL:0000837!8.19e-45!165;CL:0002087!4.13e-43!119;CL:0002057!8.52e-40!42;CL:0000766!4.67e-37!76;CL:0000860!2.23e-36!45;CL:0000557!2.69e-28!71;CL:0000763!8.89e-28!112;CL:0000049!8.89e-28!112;CL:0000839!5.99e-27!70;CL:0002009!2.93e-26!65;CL:0002194!5.94e-24!63;CL:0000576!5.94e-24!63;CL:0000040!5.94e-24!63;CL:0000559!5.94e-24!63;CL:0000134!5.70e-19!358;CL:0002320!3.95e-18!365;CL:0000219!1.97e-16!390;CL:0002393!7.14e-16!9;CL:0002397!7.14e-16!9;CL:0000838!1.58e-15!52;CL:0000542!4.36e-15!53;CL:0000051!4.36e-15!53;CL:0000094!6.88e-15!8;CL:0000034!2.20e-13!444;CL:0000081!6.30e-13!11;CL:0000048!7.70e-13!430;CL:0000723!2.50e-12!436;CL:0000945!9.59e-09!24;CL:0000826!9.59e-09!24;CL:0000791!5.00e-08!18;CL:0000789!5.00e-08!18;CL:0002420!5.00e-08!18;CL:0002419!5.00e-08!18;CL:0000790!5.00e-08!18;CL:0000624!1.48e-07!6;CL:0000080!3.21e-07!6;CL:0000623!4.87e-07!3;CL:0000825!4.87e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.97e-29;8!CL:0000081;9.77e-26;11!CL:0002393;4.29e-23;6!CL:0002397;4.29e-23;6!CL:0000766;2.85e-18;69!CL:0000576;1.11e-13;48!CL:0000860;1.39e-13;33!CL:0002057;1.39e-13;33!CL:0002087;2.55e-13;104!CL:0000623;9.15e-13;3!CL:0000767;4.48e-12;3!CL:0000775;1.51e-11;3!CL:0000226;4.75e-11;3!CL:0000842;4.75e-11;3!CL:0000784;5.67e-11;3!CL:0000738;8.27e-11;136!CL:0000473;1.49e-09;39!CL:0000234;1.49e-09;39!CL:0000763;5.36e-09;100!CL:0000771;9.88e-09;2!CL:0000988;1.82e-08;177!CL:0001014;8.28e-08;2!CL:0001016;8.28e-08;2!CL:0000451;1.26e-07;10!CL:0000097;3.47e-07;5!CL:0000791;4.43e-07;18!CL:0000789;4.43e-07;18!CL:0002419;4.43e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.45e-59,136;CL:0000037,1.65e-48,168;CL:0000988,1.51e-47,177;CL:0000766,1.03e-40,72;CL:0002032,2.40e-38,161;CL:0000837,2.40e-38,161;CL:0002031,4.59e-35,120;CL:0002087,1.67e-32,115;CL:0000094,7.24e-29,8;CL:0000763,2.10e-28,108;CL:0000049,2.10e-28,108;CL:0000557,4.96e-27,67;CL:0000860,9.74e-27,42;CL:0002057,9.74e-27,42;CL:0000081,1.01e-25,11;CL:0000839,5.18e-23,66;CL:0000473,8.57e-23,48;CL:0000234,8.57e-23,48;CL:0002009,1.04e-22,61;CL:0002194,2.69e-19,59;CL:0000576,2.69e-19,59;CL:0000040,2.69e-19,59;CL:0000559,2.69e-19,59;CL:0000134,2.44e-18,354;CL:0002320,9.09e-18,361;CL:0000219,9.30e-16,386;CL:0002393,3.94e-15,9;CL:0002397,3.94e-15,9;CL:0000034,2.27e-13,441;CL:0000048,2.68e-13,427;CL:0000723,5.87e-13,433;CL:0000623,8.81e-13,3;CL:0000825,8.81e-13,3;CL:0000767,4.49e-12,3;CL:0000775,1.62e-11,3;CL:0000784,5.48e-11,3;CL:0000226,6.77e-11,3;CL:0000842,6.77e-11,3;CL:0000838,1.97e-09,52;CL:0000542,3.37e-09,53;CL:0000051,3.37e-09,53;CL:0000771,9.52e-09,2;CL:0001014,9.88e-08,2;CL:0001016,9.88e-08,2;CL:0000451,1.34e-07,10;CL:0000097,3.12e-07,5;CL:0002028,3.12e-07,5;CL:0000791,4.61e-07,18;CL:0000789,4.61e-07,18;CL:0002420,4.61e-07,18;CL:0002419,4.61e-07,18;CL:0000790,4.61e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-17;42!CL:0000790;4.43e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.04e-28!102;UBERON:0003061!2.04e-28!102;UBERON:0002371!9.02e-27!80;UBERON:0002193!1.55e-24!112;UBERON:0001474!5.21e-24!86;UBERON:0004765!9.12e-21!101;UBERON:0001434!9.12e-21!101;UBERON:0002405!1.41e-18!115;UBERON:0002384!5.50e-17!375;UBERON:0002204!1.85e-08!167;UBERON:0003081!8.32e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-25,76;UBERON:0002390,2.92e-25,98;UBERON:0003061,2.92e-25,98;UBERON:0001474,4.89e-23,82;UBERON:0002193,2.94e-22,108;UBERON:0004765,1.95e-20,90;UBERON:0002405,1.42e-19,93;UBERON:0001434,9.06e-18,100;UBERON:0002384,5.45e-17,371;UBERON:0003081,1.42e-08,203;UBERON:0002204,3.19e-08,167 | |||
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| ||
|short_description=p2@NDE1 | |||
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Latest revision as of 18:59, 24 September 2015
Short description: | p2@NDE1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDE1_5end |
Coexpression cluster: | C213_CD14_Natural_CD8_CD4_Basophils_Eosinophils_Peripheral |
Association with transcript: | 139bp_to_ENST00000396353, ENST00000396355, NM_001143979, uc010uzy.1_5end |
EntrezGene: | NDE1 |
HGNC: | 17619 |
UniProt: | Q9NXR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.40e-25 | 76 |
hematopoietic system | 2.92e-25 | 98 |
blood island | 2.92e-25 | 98 |
bone element | 4.89e-23 | 82 |
hemolymphoid system | 2.94e-22 | 108 |
skeletal element | 1.95e-20 | 90 |
immune system | 1.42e-19 | 93 |
skeletal system | 9.06e-18 | 100 |
connective tissue | 5.45e-17 | 371 |
lateral plate mesoderm | 1.42e-08 | 203 |
musculoskeletal system | 3.19e-08 | 167 |