FFCP PHASE1:Hg19::chr18:53089493..53089517,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:53089493..53089517,- to FFCP PHASE1:Hg19::chr18:53089493..53089517,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=205bp_to_NM_001243233,uc010xdw.1_5end | |||
|cluster_id=chr18:53089493..53089517,- | |||
|coexpression_cluster_id=C2465 | |||
|description=CAGE_peak_15_at_TCF4_5end | |||
|id=chr18:53089493..53089517,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.35e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.51e-09,6;CL:0002138,3.51e-09,6;CL:0005022,3.51e-09,6;CL:0000047,2.76e-07,8 | |||
|ontology_enrichment_development_v019=CL:0005022;2.35e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.14e-33!115;UBERON:0000073!4.65e-23!94;UBERON:0001016!4.65e-23!94;UBERON:0001049!1.36e-22!57;UBERON:0005068!1.36e-22!57;UBERON:0006241!1.36e-22!57;UBERON:0007135!1.36e-22!57;UBERON:0000924!5.08e-22!173;UBERON:0006601!5.08e-22!173;UBERON:0001017!8.37e-22!82;UBERON:0004121!6.78e-21!169;UBERON:0005743!2.19e-20!86;UBERON:0003080!1.16e-17!42;UBERON:0000955!1.52e-17!69;UBERON:0006238!1.52e-17!69;UBERON:0002616!1.60e-17!59;UBERON:0002346!4.87e-17!90;UBERON:0002780!6.40e-17!41;UBERON:0001890!6.40e-17!41;UBERON:0006240!6.40e-17!41;UBERON:0001893!5.98e-16!34;UBERON:0003075!6.06e-16!86;UBERON:0007284!6.06e-16!86;UBERON:0002020!1.17e-15!34;UBERON:0003528!1.17e-15!34;UBERON:0000153!1.60e-15!129;UBERON:0007811!1.60e-15!129;UBERON:0002791!2.44e-15!33;UBERON:0001869!1.02e-14!32;UBERON:0000033!3.60e-14!123;UBERON:0002619!8.76e-13!22;UBERON:0000956!2.48e-12!25;UBERON:0000203!2.48e-12!25;UBERON:0001950!8.37e-12!20;UBERON:0003056!1.48e-10!61;UBERON:0000468!7.85e-09!659;UBERON:0000475!1.25e-08!365;UBERON:0004111!2.38e-08!241;UBERON:0000467!5.09e-08!625;UBERON:0000480!6.49e-08!626;UBERON:0001871!9.21e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.32e-10;20!UBERON:0002619;8.53e-09;22!UBERON:0000956;1.65e-07;25!UBERON:0000203;1.65e-07;25!UBERON:0001893;3.69e-07;34!UBERON:0001473;6.76e-07;8!UBERON:0004536;6.76e-07;8!UBERON:0006558;6.76e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-14,114;UBERON:0001016,1.31e-14,89;UBERON:0001017,3.84e-12,81;UBERON:0004121,6.03e-12,171;UBERON:0000924,6.03e-12,171;UBERON:0006601,6.03e-12,171;UBERON:0011216,2.02e-11,223;UBERON:0001049,2.95e-10,56;UBERON:0005068,2.95e-10,56;UBERON:0006241,2.95e-10,56;UBERON:0007135,2.95e-10,56;UBERON:0001950,7.62e-10,20;UBERON:0000073,7.60e-09,53;UBERON:0002616,7.60e-09,53;UBERON:0002619,8.85e-09,22;UBERON:0002780,1.53e-08,41;UBERON:0001890,1.53e-08,41;UBERON:0003080,1.53e-08,41;UBERON:0006240,1.53e-08,41;UBERON:0002346,2.48e-08,86;UBERON:0001893,3.17e-08,34;UBERON:0010371,4.37e-08,104;UBERON:0003075,5.20e-08,82;UBERON:0007284,5.20e-08,82;UBERON:0001869,1.36e-07,32;UBERON:0000955,1.61e-07,68;UBERON:0006238,1.61e-07,68;UBERON:0000956,1.70e-07,25;UBERON:0000203,1.70e-07,25;UBERON:0003528,5.40e-07,34;UBERON:0002020,5.40e-07,34;UBERON:0001473,9.03e-07,8;UBERON:0004536,9.03e-07,8;UBERON:0006558,9.03e-07,8 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.704772020479856,2.00146596706261,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0.6024118375565,0,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,1.06729878806013,1.33888245105868,0.402829317109147,0.760272105718513,1.22031028774085,1.83831540172934,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,2.1349799145941,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.340296549480063,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,1.09750285408626,0,0.804231779293047,2.4998880192803,0,0,0,0.231860809950154,0,4.18662698507114,3.24089858803628,6.84914948044554,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.358234090811393,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,2.28685161800217,9.10978977003352,2.31986643833309,2.68026024534958,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,0.410635780069046,0,0.348631135379878,0,0.200506470303285,0.368323955743585,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0.340906509664404,0.267096106940212,0.330569830721956,0,1.91419068741876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,1.44333169088268,0,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.47024129588619,6.31730795427444,19.4763437518201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0.296964680832639,0,0.994147647766298,0.844016498463076,0,0,0,0.398495976502139,0.828851746593443,0,0.102268682502155,0.369254416383208,0,0,0,0,1.28236427328014,0,0,0.969332746095218,1.57705766875147,0,0,0,2.17499872630438,0.796554137998498,0,0,3.79217710565611,0.291604613383254,2.08349993919951,0.885741385813839,0.964771509003264,0,5.41838373663001,0.295547618953547,0.438770794307945,0,0,2.15460723810632,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0.995261931078505,0.796118080530053,1.22206028986725,0,0,0,1.41542379259422,3.21031058919516,1.1713222286267,12.4069256666653,0,0,0.394584402849391,1.20990716048664,5.81538247097931,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.16386819786103,0,0.451961481561065,0,0,1.58276989889697,0,0,0,0,0,0.114536596165916,0,0,0,0,0.543616824294456,0.523014231561666,0,0,0,1.09524303113594,0,0,0,1.67569440763353,0.916641696046735,2.87149209830726,0.199679000498991,0,0.446342914883745,1.14211903227435,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0.77380195455795,0.91124334987037,2.68347750079413,0,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.52893040697076,0,0,1.28144895081234,4.40172054279065,0.414239055347196,0,0,13.7625636170412,0.638341257770182,0,0.2506898940227,0.612691153526923,0.655745261419609,3.61224421375539,0,0.976210119215705,1.3771002377715,0.573409195690071,1.44207766997908,0.558867626472451,0,1.49976489554528,0,0,0,0.936669811613763,11.8835243460877,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0.813741466409323,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0.622077260032973,1.02315497042921,0,0.786329709279482,3.1670795075684,0,0.850299680406731,0.495743057036009,2.23457967189298,0.318004350653419,0,0,0,0,0.963438376446893,0,1.11743701340006,0.41023272848151,3.02486035466062,1.10651603942749,0.807378228159255,4.28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| 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| ||
|short_description=p15@TCF4 | |||
}} | }} |
Latest revision as of 21:03, 19 September 2015
Short description: | p15@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TCF4_5end |
Coexpression cluster: | C2465_small_peripheral_acute_lymphoma_diffuse_Neural_merkel |
Association with transcript: | 205bp_to_NM_001243233, uc010xdw.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.51e-09 | 6 |
endothelial cell of lymphatic vessel | 3.51e-09 | 6 |
vascular lymphangioblast | 3.51e-09 | 6 |
neuronal stem cell | 2.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-14 | 114 |
nervous system | 1.31e-14 | 89 |
central nervous system | 3.84e-12 | 81 |
ectoderm-derived structure | 6.03e-12 | 171 |
ectoderm | 6.03e-12 | 171 |
presumptive ectoderm | 6.03e-12 | 171 |
organ system subdivision | 2.02e-11 | 223 |
neural tube | 2.95e-10 | 56 |
neural rod | 2.95e-10 | 56 |
future spinal cord | 2.95e-10 | 56 |
neural keel | 2.95e-10 | 56 |
neocortex | 7.62e-10 | 20 |
regional part of nervous system | 7.60e-09 | 53 |
regional part of brain | 7.60e-09 | 53 |
regional part of cerebral cortex | 8.85e-09 | 22 |
regional part of forebrain | 1.53e-08 | 41 |
forebrain | 1.53e-08 | 41 |
anterior neural tube | 1.53e-08 | 41 |
future forebrain | 1.53e-08 | 41 |
neurectoderm | 2.48e-08 | 86 |
telencephalon | 3.17e-08 | 34 |
ecto-epithelium | 4.37e-08 | 104 |
neural plate | 5.20e-08 | 82 |
presumptive neural plate | 5.20e-08 | 82 |
cerebral hemisphere | 1.36e-07 | 32 |
brain | 1.61e-07 | 68 |
future brain | 1.61e-07 | 68 |
cerebral cortex | 1.70e-07 | 25 |
pallium | 1.70e-07 | 25 |
brain grey matter | 5.40e-07 | 34 |
gray matter | 5.40e-07 | 34 |
lymphatic vessel | 9.03e-07 | 8 |
lymph vasculature | 9.03e-07 | 8 |
lymphatic part of lymphoid system | 9.03e-07 | 8 |